Phocoena sinus (vaquita): 116754434
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Entry
116754434 CDS
T07759
Symbol
SMAD1
Name
(RefSeq) mothers against decapentaplegic homolog 1
KO
K04676
mothers against decapentaplegic homolog 1
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04081
Hormone signaling
psiu04350
TGF-beta signaling pathway
psiu04390
Hippo signaling pathway
psiu04550
Signaling pathways regulating pluripotency of stem cells
psiu05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
116754434 (SMAD1)
04390 Hippo signaling pathway
116754434 (SMAD1)
09133 Signaling molecules and interaction
04081 Hormone signaling
116754434 (SMAD1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
116754434 (SMAD1)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
116754434 (SMAD1)
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Gene cluster
GFIT
Motif
Pfam:
MH2
MH1
IRF-3
DUF4223
Motif
Other DBs
NCBI-GeneID:
116754434
NCBI-ProteinID:
XP_032488970
Ensembl:
ENSPSNG00000014264
UniProt:
A0A8C9CB85
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Position
5:complement(114738353..114816926)
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AA seq
465 aa
AA seq
DB search
MNVTSLFSFTSPAVKRLLGWKQGDEEEKWAEKAVDALVKKLKKKKGAMEELEKALSCPGQ
PSNCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPLECCEFPFGSKQKEV
CINPYHYKRVESPVLPPVLVPRHSEYNPQHSLLAQFRNLGQNEPHMPLNATFPDSFQQPS
SHPFPHSPNSSYPNSPGSSSSTYPHSPTSSDPGSPFQMPADTPPPAYLPPEDPITQDGSQ
PMDTNMMAPSLPSEINRGDVQAVAYEEPKHWCSIVYYELNNRVGEAFHASSTSVLVDGFT
DPSNNKNRFCLGLLSNVNRNSTIENTRRHIGKGVHLYYVGGEVYAECLSDSSIFVQSRNC
NYHHGFHPTTVCKIPSGCSLKIFNNQEFAQLLAQSVNHGFETVYELTKMCTIRMSFVKGW
GAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLTQMGSPHNPISSVS
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtgacaagtttgttttccttcacaagtccagctgtgaagagacttcttgggtgg
aaacagggtgatgaagaagaaaaatgggcagagaaagctgttgacgctttggtgaaaaaa
ctgaagaaaaagaaaggtgccatggaggaactggaaaaggccttgagctgtccggggcag
cccagtaactgtgtcaccattccccgctccctggacggcaggctgcaagtttcccaccgg
aaggggctgcctcacgtcatttactgccgtgtgtggcgctggcctgaccttcagagccac
catgaactaaaaccactggaatgctgtgagtttccttttggttccaagcagaaggaggtg
tgcatcaatccctaccactataagcgagtagaaagccctgttcttcctccagtactggtt
ccaagacacagcgaatataatcctcagcacagcctcttagctcagttccggaacttagga
caaaatgagcctcacatgccactcaacgccactttcccggattctttccagcaacccagc
agccatccgtttcctcattctcccaatagcagttacccaaactctcctgggagcagcagt
agcacctaccctcactctccgaccagctcagacccaggaagcccctttcagatgccagcc
gatacacctccacctgcttatctgcctcctgaagatcccataacccaggatggctctcag
cccatggacacaaatatgatggcgccttcactgccctcagaaatcaacagaggagatgtt
caagcagttgcttacgaggaaccaaaacactggtgctctattgtctactatgagctcaat
aatcgtgtgggcgaagctttccacgcctcctccacgagcgtgctggtggatggcttcacc
gatccttccaacaacaagaaccgtttctgccttgggctgctctccaacgtcaaccggaat
tccactatcgaaaacactaggcgacatatcgggaaaggagttcatctttattatgtcgga
ggcgaggtatatgctgaatgcctcagtgacagtagtatctttgtgcagagtcggaactgc
aactaccatcatggatttcatcccactactgtttgcaagatccctagtgggtgtagtttg
aaaatttttaacaaccaagaatttgctcagttactggcacagtctgtgaaccatggcttc
gagacagtctatgagctcacaaaaatgtgtactattcgcatgagctttgtgaagggttgg
ggagcagaataccaccgccaggatgttactagcaccccctgctggattgagatccatctg
catggccccctccagtggctggataaagttcttacccagatgggttcacctcataatcct
atttcatctgtgtcttaa
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