Phocoena sinus (vaquita): 116754452
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Entry
116754452 CDS
T07759
Symbol
FBXL5
Name
(RefSeq) LOW QUALITY PROTEIN: F-box/LRR-repeat protein 5
KO
K10271
F-box and leucine-rich repeat protein 5
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psiu04121
]
116754452 (FBXL5)
Ubiquitin system [BR:
psiu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
116754452 (FBXL5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F-box-like
F-box
LRR_6
Hemerythrin
LRR_4
DUF7885
LRR_At5g56370
LRR_8
LRR_Zer-1
Motif
Other DBs
NCBI-GeneID:
116754452
NCBI-ProteinID:
XP_032489017
Ensembl:
ENSPSNG00000015159
LinkDB
All DBs
Position
5:complement(43666483..43717180)
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AA seq
691 aa
AA seq
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MAPFPEEVDVFTAPHWRMKQLVGLYCDKLSKTNFSNNNDFRALLQSLYATFKEFKMHEQI
ENEYIIGLLQQRSQTIYNVHSDNKLSEMLSLFEKGLKNVKNEYEQLNYAKQLKERLEAFT
RDFLPHMKEEEEVFQPMLMEYFTYEELKDIKKKVIAQHCSQKDTAELLRGLSLWNQAEER
QKFFKYSVDEKSDKEAEVSEQSTGITHLPPEVMLSIFSYLNPQELCRCSQVSTKWSQLAK
TGSLWKHLYPVHWARGDWYSGPATELDTEPDEEWVKNRKDESRAFQEWDEDADIDESEES
AEESIAISIAQMEKRLLHGLIHNVLPYVGTSVKTLVLAYSCAVSSKMVRQILELCPNLEH
LDLTQTDISDSAFDSWSWLGCCQSLRHLDLSGCEKITDVALEKISRALGILTSHQSGLLK
TSTSKITSTTWKNKDITMQSTKQYACLPDITNKGIGEEIDNEHPWTKPISSENFTSPYVW
MLDAEDLADIEDAVEWRHRNVESLCVMETASNFSCSSSGCYSKDIVGLRTSVCWQQHCAS
PAFAYCGHSFCCTGTALRTMSALPESSALCRKASRTRLLRGTDLIYSGSEKTDQETGRVL
LFLSLSGCYQITDHGLRVLTLGGGLPYLEHLNLSGCLTVTGAGLQDLVSACPSLNDEYFY
YCDNINGPHADTASGCQNLQCGFRAACRSGE
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccttccccgaagaagtggacgtcttcaccgccccacactggcggatgaagcag
ctggtggggctctactgcgacaagctttctaaaaccaacttttccaacaacaatgatttc
cgtgctcttctgcagtctctgtatgctacttttaaggagttcaaaatgcatgagcagatt
gaaaacgaatacattattggtttgcttcaacaacgcagccagaccatttataatgtgcat
tctgacaataaactctctgagatgcttagcctctttgaaaagggtctgaagaatgttaag
aatgaatatgagcagttaaattatgcgaaacagttgaaagagagactggaggcttttaca
agagattttcttcctcacatgaaagaggaagaggaggtttttcagcccatgttaatggaa
tattttacctatgaagagcttaaggatattaaaaagaaagtgattgcacaacactgctct
cagaaggatactgcagaactccttagaggtcttagcctatggaatcaagctgaggagcgg
cagaagttttttaaatattctgtggatgaaaagtcagataaagaagcagaagtgtcagaa
caatccacaggtataactcatcttcctcctgaggtaatgctgtcaattttcagttatctt
aatcctcaagaattatgtcgatgcagtcaagtaagcactaaatggtctcagctggcaaaa
actggatcactttggaaacatctttaccctgttcattgggccagaggtgactggtatagt
ggtcctgcaactgaacttgatactgaacctgatgaggaatgggtgaaaaatagaaaagat
gaaagtcgtgcttttcaggagtgggatgaagatgccgatatagatgaatctgaagagtct
gcagaggaatcgattgccatcagcattgcacaaatggaaaaacgtttactccatggctta
attcataatgttctaccgtatgttggtacttctgtaaaaactttagtattagcgtacagc
tgtgcagtttccagcaaaatggttaggcagattttagagctttgtcctaacttggaacat
ttggatcttacccaaactgacatttcagattctgcatttgacagttggtcttggcttggt
tgctgccagagtcttcggcatcttgatctatctggatgtgaaaaaatcacagatgtggct
ctagaaaagatttctagagctcttggaattttgacatctcatcagagtggccttttgaaa
acttcaacaagcaaaattacttcgactacctggaaaaataaagacattaccatgcagtcc
accaagcagtatgcttgtttgcctgatataactaacaagggcatcggagaagaaatagat
aatgaacacccctggactaaacctatttcttctgaaaatttcacttctccttatgtgtgg
atgttagatgctgaagatttggctgatattgaagatgctgtagaatggagacatagaaat
gttgaaagtctttgtgtaatggaaacagcatccaattttagttgttcctcctccggttgt
tacagtaaggatattgttggactaaggactagtgtctgttggcagcagcattgtgcttct
ccagccttcgcgtattgtggtcattcattttgttgtacaggaacagctttaagaactatg
tcagcactcccggagtcttctgcattgtgtagaaaagcatcaaggactagattgcttagg
ggaacagacttaatttactctgggagtgaaaaaactgatcaagagactgggcgtgtactt
ctgtttctcagtctgtccggatgttatcagatcacagaccatggtctcagggttttgact
ctgggaggagggctaccttatttggagcaccttaatctctctggttgtcttactgtaact
ggtgcaggcctgcaggatttggtttcagcatgtccttctctaaatgatgaatacttttac
tactgtgacaacattaacggtcctcatgctgacaccgccagtggatgccagaatttgcag
tgtggttttcgagccgcctgccgctctggcgaatga
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