Phocoena sinus (vaquita): 116754520
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Entry
116754520 CDS
T07759
Symbol
TACC3
Name
(RefSeq) LOW QUALITY PROTEIN: transforming acidic coiled-coil-containing protein 3
KO
K14283
transforming acidic coiled-coil-containing protein 3
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psiu03019
]
116754520 (TACC3)
03036 Chromosome and associated proteins [BR:
psiu03036
]
116754520 (TACC3)
Messenger RNA biogenesis [BR:
psiu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
116754520 (TACC3)
mRNA cycle factors
P-body specific factors
116754520 (TACC3)
Chromosome and associated proteins [BR:
psiu03036
]
Eukaryotic type
Sister chromatid separation proteins
TACC proteins
116754520 (TACC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TACC_C
DUF4776
NAGLU
KIF21A_2nd
TruB_N
Motif
Other DBs
NCBI-GeneID:
116754520
NCBI-ProteinID:
XP_032489104
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All DBs
Position
5:961284..973159
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AA seq
940 aa
AA seq
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MPGDGGHRSHCPPAYGLSSTHAWQAAVTENSSDHRAQRAVTPEAEPHGRDLLLDLPLLAV
PHLTPDATCFGNLGSTLPAPLIPENPLAPGHQPSSPPGPAPSAQEPPPRNVTGDKSTENC
DFLFSPLELTGRSSVLRLSQKENVPPKSTAKAMKVTFQTPLRDPQTHRILSPSTGSKLEA
XFALGDTIGLENCHQVWTQKENQQFTKETDTRTTNGILQKPAVADPTPPSEDMRPASDDR
HRSGPSLAPQACLDPASSSQMPKSVENQRHSPAQTSGSPEPTQEEHVHPHSLEESATSTS
TILEDPPGMASQDRTEDPLRATGENSSGVAAPSAGAASAPGTHPGGARGAEPLVDLPSEA
PAGPVEAGGATFPSPQKEEAEGQTADSLRSEPIRLEFDFSDVTIKRPPPLRKRGKTPALR
PPSRRPEARQEKEEKALVEAGEGPDPPPRGSNSLDRDKLDDPDCNPAGGDGEAGPQSTPR
AGRPQRPRLQAGEHGVAVVGARPEMPPAALSRGPRAAATALGEYDALADEVGDGFALATR
LGLKPGSWAGGQVLLASADDTPGVQTSAGTAEAAGEEGTTDASGASAPTSSPGSKPPTVP
TDPTATTXRGPEPGLDLSGEHFWDPAEVLGTGAEXDYLEQFGASSFKESALRKQSLYLKF
DPLLQDSPRGPAPVAPEPSSARDTDAHSSGSPPEAQLLDLDFTGAPDVPTLGPAPCDLGP
RAPLLPVGPIVDVLQYSQKDLDTAVRARGGWATQKENEALRVRCTALQEKILEMGKIMDA
FEGTVYQAMEEAQKQKELAKAEIQKVLRDRDQLTADLHSTEKSFSDLFKRFEKQKEVIEG
YRTNEESLKKCVEDYIGRIEKEGQRYQALKAHAEEKLQLANEEITQVRSKAQAEALALQA
VLRKEQMRVHSLEKVVEQKTKENDELTRICDDLISKMERI
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgccgggcgacggcgggcaccgcagtcactgcccgcccgcgtacggcctttcctctacg
cacgcctggcaagctgcggttaccgagaattccagcgaccaccgcgcccagcgtgccgtc
accccggaagcggaacctcatgggcgtgacctgttactcgacctcccattgctggcggtg
ccccacctgactcctgacgccacctgctttggaaacctgggctccacgctccccgccccg
ctgattccggagaacccgctcgcccccggccaccagccctcctccccgcctggccctgct
ccctctgctcaggagccccctccacgaaatgtcactggtgacaaaagtacagaaaactgc
gacttcctgttttcaccactggaacttaccggaagatcatctgttctccgtctatcacag
aaagaaaacgtaccacctaagagcacagccaaagctatgaaggttacttttcagacacct
ctgcgggatccacagacacacaggattttaagtcccagcacgggcagcaagcttgaagct
ntgtttgctctgggcgacaccattggattagaaaactgtcatcaagtctggacccagaaa
gagaaccaacagttcaccaaggaaacagacactagaacgaccaatggaattctccagaaa
ccagcagtggccgatccaacccccccttcagaggacatgagaccagcctctgacgacagg
catcgcagcgggccctccttggctccccaggcctgcctggatcctgcaagctcttcccag
atgcccaaaagtgttgaaaaccagaggcattctccggcacaaacgtcaggcagccctgag
cccacccaggaagaacacgtccatcctcattccttagaggaaagtgctacctctacttcc
acaattctagaagaccctcccgggatggcatcccaggacagaacagaggacccgctgaga
gccacaggagaaaactcgagcggggtcgctgcaccctctgccggggccgcttcagctcct
ggtacccaccccggcggagcccgcggagcagagcccctcgtggacctgcctagcgaggcc
ccagctggccccgtggaggctggaggtgccacgttccccagtcctcagaaggaggaggcc
gaaggccaaacggccgactctttgaggagtgagcccataaggctggaatttgacttttct
gatgtcaccatcaaaaggccgcccccgctgaggaaacgagggaagaccccggctctcaga
cctccctcaaggagaccagaggcgaggcaggaaaaggaggaaaaggccctcgtggaggcg
ggcgagggtcccgatccccctccccgcgggtccaacagcctggaccgggacaagctggac
gacccagactgtaaccccgccggaggtgacggagaggccggcccccagagcaccccaaga
gcgggccggccacagaggcctcgtctccaagccggtgagcacggggtggcagtggtgggc
gcgagaccagagatgccacctgcagccctgagcaggggccccagggcagctgccacagct
cttggggaatacgatgctcttgcagatgaggtcggggatggctttgcgttggccacccgg
ctgggcctcaagcctggctcctgggctggggggcaggtgctcttggcctcggcggatgac
acaccgggggtgcagacctctgcagggaccgcagaagcggcgggcgaggaggggaccaca
gacgcttcgggggcatcggctccaaccagcagcccgggcagcaagccaccaaccgtaccc
actgaccccacagccacaaccncccgggggccagagcccggcctggacctgagtggggag
cacttctgggaccctgctgaggttctaggcacgggggccgagntggattacctggagcag
ttcggggcgtcctcgtttaaggagtcggccctgaggaagcagtccttgtaccttaagttt
gacccgctcctgcaggacagcccccgggggccggcgcctgtggccccggagcccagcagt
gcacgggacacagacgcgcattcctcgggaagccccccggaggcccagctgctggacctg
gacttcacaggagccccggacgttcccacgctcggcccagctccttgtgacctcggaccc
agggctccgctgctgcccgtggggcccattgtggacgtgctgcagtacagccagaaggac
ctggacactgcggtgagggcaagggggggttgggcgacgcagaaggagaacgaggcgctt
agggtcaggtgcacggcgctgcaggaaaagatcctggagatggggaaaatcatggacgcg
tttgaggggaccgtgtaccaggcgatggaggaggctcagaaacagaaggaacttgccaaa
gccgagatccagaaggttctgagggacagagaccagctgactgcagacctgcactccacg
gagaagtcgttctccgacctcttcaagcggtttgagaaacagaaggaagtgatcgaaggc
taccgcacgaatgaagagtcgctgaagaagtgtgtcgaggattacataggcaggatcgag
aaggagggccagaggtaccaggcgctgaaggcccacgcggaggagaagctccagctggcg
aacgaggagatcacccaggtccgcagcaaggcccaagcggaggccctggcgctgcaggca
gtcctgaggaaggagcagatgcgcgtccactcgctggagaaggtcgttgagcagaagact
aaagaaaacgatgaactgaccagaatctgtgacgacctcatttccaagatggagagaatc
tga
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