Phocoena sinus (vaquita): 116754522
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Entry
116754522 CDS
T07759
Symbol
NFXL1
Name
(RefSeq) NF-X1-type zinc finger protein NFXL1 isoform X1
KO
K15683
NF-X1-type zinc finger protein NFXL1
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psiu04121
]
116754522 (NFXL1)
Ubiquitin system [BR:
psiu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
116754522 (NFXL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-NF-X1
Motif
Other DBs
NCBI-GeneID:
116754522
NCBI-ProteinID:
XP_032489106
Ensembl:
ENSPSNG00000003970
LinkDB
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Position
5:complement(72061294..72117994)
Genome browser
AA seq
1001 aa
AA seq
DB search
MLLHSRSISLPSSLPLRSISKARAQRGLVLWERQGRDLFKPSPHPAEAVLIPPLTPASPA
VLFPRLGTTVLTLLPLFFFFSSAGMEASWRQVASGRGRARGRATAAPSSGNGVHLRGAGG
GREKGSVGAAGLGPIPGGAATPAAAGSSARRSPAGSEALQTSLASAELMSQKKFEEIKKA
NQAAAKKLVEEHLNSSSEEEGDEDFEGKRGKIVANTFITYTTQTDGDVRELERTKQYVNE
AFQAGAMTCLICIASVKRNQAVWSCSGCFCIFHMPCIQKWAKDSQFLVSSPLTDDDFGKR
DYPWPCPKCRFEYKRSDTPSRYYCYCGKVEDPPLDPWLVPHSCGQVCERDFKPPCGHKCL
LLCHPGPCPPCPKMVTTTCYCKKAKPIPRRCSAKEWSCHLPCGRKLLCGQHKCENPCHAG
SCPPCPRVSRQKCVCGKQVAERSCASPLWHCDQVCGKTLPCGNHTCEQVCHVGACGECPR
SGKRFCPCQKSKFSLPCTEDVPTCGDSCDKVLECGIHRCSQRCHRGPCETCRQEVEKHCR
CGKHTKRMPCHKPYLCETKCVKLRDCQKHQCRRKCCPGNCPPCDQNCGRTLGCRNHKCPS
VCHRGSCYPCPETVGVKCNCGNTKVTVPCGRERTTRPPKCKEQCSRPPTCHHTSQEKHRC
HFGSCPPCHQPCRKVLEKCGHLCPAPCHDQALIKQTGRHQPSGPWEQPSEPAFIQTALPC
PPCQVPIPMECLGKHEVSPLPCHTVGPYSCRRVCGRTLDCQNHTCMKECHKVTEIDSCTD
KNKAGPECLQCEEGCSKSRPPGCPHPCVLPCHPGECPPCVQMLRVKCHCKITSLYVECRK
ITTADVNEKNLLSCCKNQCPKELPCGHRCKEMCHPGECPFNCNQKVKLRCPCKRIKKELQ
CNKVRENQISIECDITCKEMKRKASEIKEAEAKAALEEEKRRQQAELEAFENRLKGRRKK
NRKRDEVAVELTLWQKYKYYLFPVCAVVVLVFAWYIAHGVD
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atgctccttcactcgcggtccatttctctgcctagttctctccctcttcgatccatctcc
aaagcccgggctcagcggggactcgtcctctgggagagacagggccgcgaccttttcaaa
cccagtccccaccccgcggaggccgtcctcattccgcctctcacaccggcttcccccgct
gtcctttttccccgccttggtaccaccgtgctcacgctccttccactctttttttttttt
tcctctgcagggatggaagcttcctggcgccaggtggccagcggccgaggccgagcccga
ggacgggccactgcggccccctcctcaggaaatggagtccatcttcgcggcgccggggga
gggcgagagaaggggtcggtgggcgctgctggccttggccccattcccggtggagctgca
acccctgcggctgcaggtagctcagcccggcgcagccccgcgggatctgaagcgctgcag
acttccttggccagtgcagagctgatgtctcaaaagaaatttgaggaaatcaagaaggct
aatcaagctgcagccaaaaaacttgttgaagaacaccttaactcttcatctgaggaagaa
ggagatgaggattttgaaggaaaaagaggaaaaatagttgctaatacatttataacttac
actactcagacagatggagatgttcgtgagttagagcgaacaaaacagtatgtaaatgaa
gcttttcaagcaggggctatgacatgcttaatttgtattgcttcagtgaagagaaaccaa
gcagtttggagttgttcaggatgtttctgtatatttcacatgccctgtatccagaagtgg
gctaaagacagccagtttctggtatcttctcctttgacggatgatgattttggaaagaga
gattatccctggccttgtccaaaatgtaggtttgaatacaaacgatctgacacacctagt
aggtactattgctattgtggcaaagtggaagatccacctttagatccgtggcttgtgcct
cattcatgcggccaagtatgtgagagagattttaaacctccttgtggccataagtgttta
ctcctctgccatccaggtccatgccctccttgtcctaagatggtcacaactacttgttat
tgtaagaaagcaaaacctatccctcgtcggtgcagtgctaaggaatggtcctgtcacctg
ccatgtggacggaaattgctttgtggacaacataaatgtgaaaatccttgtcatgcagga
agttgcccaccctgtccaagagttagtaggcaaaagtgtgtctgtggcaaacaagtagct
gaaagaagttgtgcaagtccactgtggcactgtgatcaagtatgtgggaaaacactgcca
tgtggtaatcatacgtgtgagcaagtttgccatgtaggtgcttgtggagaatgtcctcga
tctgggaaaaggttctgtccctgtcagaagtcaaagttttctttgccttgtacagaagat
gttccaacttgtggagacagttgtgacaaagtacttgaatgtggaatccacagatgttca
cagcgttgtcaccgaggtccttgtgaaacatgtagacaagaagtggagaagcattgtcgt
tgtggaaagcatactaaacgaatgccgtgtcataaaccgtatctttgtgaaactaagtgt
gttaagttgcgggactgtcagaagcatcagtgtaggagaaagtgttgccctggaaactgt
ccaccttgtgatcaaaactgtggacggactttaggatgtagaaaccataagtgtccatct
gtctgccatagaggtagctgttatccctgcccagaaactgtaggtgtgaagtgcaattgt
ggtaatacaaaggtgacagtaccctgtggccgagaacgtaccacaagaccccccaagtgc
aaagagcagtgcagtcgaccaccaacttgccatcatacaagtcaagaaaaacatcgctgt
cactttggctcttgtcctccatgtcatcaaccttgccgaaaggttttggagaaatgtggt
cacttgtgtcctgctccatgtcatgatcaagcattaataaagcaaactggcaggcaccag
ccttcaggcccttgggaacagccgtctgaaccagcgtttattcagactgcattgccttgt
cctccgtgtcaagtgcctattcctatggaatgtcttgggaagcatgaggtgagcccacta
ccatgccacaccgtaggaccctactcttgtaggagagtttgtggacgaaccttagattgt
cagaatcatacatgtatgaaagagtgccacaaagtaactgaaattgattcctgcactgac
aaaaacaaggctggcccagaatgccttcaatgtgaagaagggtgctctaaatcacggccg
ccaggttgtcctcatccgtgtgttttgccatgtcaccctggagagtgtcctccctgtgtt
cagatgcttagagtaaaatgtcactgcaagatcacaagtctttatgtggaatgtagaaaa
ataaccacagctgatgtaaatgaaaagaacctccttagttgttgcaaaaatcagtgtcct
aaagagcttccttgtggtcatagatgcaaagaaatgtgccatcctggtgaatgtcccttt
aattgcaaccaaaaggtgaaacttagatgtccttgtaaaagaattaaaaaggaattgcag
tgcaacaaagtacgtgaaaatcagatttccatagaatgtgacataacatgcaaggaaatg
aagcggaaagcatctgagataaaagaagcagaagccaaagctgctcttgaagaggaaaaa
cgaagacaacaggccgaactggaggcttttgaaaacagactgaagggtcgtcggaagaag
aacaggaagagagatgaagtggcagttgagctaacgctgtggcaaaaatataaatattat
ctctttccagtgtgtgcagttgtggttttagtgtttgcatggtacatagcccatggtgtg
gattaa
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