Phocoena sinus (vaquita): 116754523
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Entry
116754523 CDS
T07759
Name
(RefSeq) LOW QUALITY PROTEIN: DNA polymerase nu-like
KO
K16618
DNA polymerase nu [EC:
2.7.7.7
]
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
116754523
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psiu03400
]
116754523
Enzymes [BR:
psiu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
116754523
DNA repair and recombination proteins [BR:
psiu03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
A-family DNA polymerase
116754523
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A
LIN14_BEN
HOOK_N_NuMA
Motif
Other DBs
NCBI-GeneID:
116754523
NCBI-ProteinID:
XP_032489115
LinkDB
All DBs
Position
5:complement(1221924..1336703)
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AA seq
525 aa
AA seq
DB search
MKQVYGLWQLFCTLELPLIPILAVMESYSIQVNKEEMKRTSALLGSRLKELEQEAHFVAG
EQFLITSSNQLREILFGKLQLHLLRPQETLPKTGLRRHPSTSEALNALQDLHPLPKIILE
YRQVHKIKSTFVDGLLACMKKGSVSSTWNQTGTVTGRLSANHPNIQGISKHPIQITRPQN
FQGKDELLTISPRAVFVSSEGHTFLAADFSQIELHILAHLSGDPELLKLFQESERGDVFS
TLTSQWKDISPERVTHADREQTKKVVYSVVYGAGKERLAACLGVPVQEAAQFLESFLQKY
KKIKDFTQATIARCHQTGCVVSIMGRRRPLPRIRARDPQLRAQAERQAVNFVVQGSAADL
CKMAMIHLFTAVATSPILTARLVAQIHDELLFEVEDSQIPEFAALVRGTMEALQHVPLKV
SLSVGRSWGHLAPLQEAPARDPTTVLPSLQATAQPPLVPERLPPCTIFRLHLVCSPRQQX
GKRTGFHQPRCVAFPRSESSAWYWARATFPLELGQLGAPWSKRLL
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaggtttacggtttatggcaactgttttgtactttggagcttcctctgatacca
attttggcagtgatggaaagctacagcattcaggtgaacaaggaagagatgaagaggact
tcagcacttcttgggtctcgtctcaaggaactggagcaagaagcccattttgttgcagga
gaacagtttcttataacaagcagtaatcagcttcgagagatcctgtttggcaagctgcag
ctgcacctgctgcgtccacaggagactctccccaaaactgggctccggagacacccgtcc
acatcagaagccttaaatgctctacaagaccttcatccattacccaaaataattttggaa
tataggcaggttcacaagatcaagtcaacctttgtagatggattactagcttgcatgaaa
aagggctccgtttcctccacgtggaaccagactggaaccgtgaccggaagactgtcagcc
aatcatcctaatatccaaggcatctccaagcacccgattcaaataactagacctcaaaat
tttcaaggtaaagacgaactccttaccatctccccgagggccgtgtttgtttcatccgaa
ggccacaccttcctagcagcagacttttcacagattgaattacacattcttgcacactta
tctggggatccagaacttttgaagttattccaggaatctgaaagaggtgatgtattttcc
accctgacttcacagtggaaggacatttccccagagcgcgtgacacacgcagacagagag
cagaccaagaaggtggtgtactcggtggtctatggagcagggaaggagcggcttgctgct
tgccttggagttcccgttcaggaagctgcccagtttttggagagttttttgcagaagtac
aagaaaatcaaggacttcacccaagcaaccattgcccggtgtcaccagacaggctgtgtg
gtgtccatcatgggcaggaggaggccgctgccgaggatccgtgcacgtgacccgcagctc
cgggctcaagcagagcggcaggcagtgaactttgtggtgcaaggctcggccgcagacctc
tgcaagatggccatgatccacctcttcacagcagtggccacatcccccatcctgacggcc
aggttggttgcccagattcacgatgagctgctgtttgaagtggaggattcacagattcct
gagttcgcagccctcgtcaggggaaccatggaggccctgcagcacgtgcccctgaaggtg
agcttgagtgttggccgctcgtggggacacctggcaccactgcaggaggccccagcccgt
gaccccaccaccgtcctgccgagtctccaagcaaccgctcagccaccgctggtccctgag
cgcctacccccgtgcacgatttttcgccttcatttggtctgtagccccaggcaacagncg
gggaagagaactggtttccaccagccccgctgcgtggccttcccaaggtcagagtcaagc
gcttggtactgggctagggccaccttccctctggagctggggcagctgggtgccccctgg
agtaaacgcctcttgtga
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