Phocoena sinus (vaquita): 116754612
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Entry
116754612 CDS
T07759
Symbol
SEC24B
Name
(RefSeq) protein transport protein Sec24B isoform X1
KO
K14007
protein transport protein SEC24
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
116754612 (SEC24B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psiu04131
]
116754612 (SEC24B)
Membrane trafficking [BR:
psiu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
116754612 (SEC24B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Sen15
Motif
Other DBs
NCBI-GeneID:
116754612
NCBI-ProteinID:
XP_032489301
Ensembl:
ENSPSNG00000006099
UniProt:
A0A8C9DZI7
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All DBs
Position
5:complement(30643070..30737253)
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AA seq
1252 aa
AA seq
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MSAPAGSPHPAASSRIPPKLGGAAASGAAAPAGPGPGPHQQNGPAQNQMQVPSGYGLHPQ
SYTAPSGHYSQGPEKMTSLPLDSQCDDYYSGLYRVPTQNVVTPNTASPQPGAQQMYGSVP
PAPHVVGSTLGSFQGAGSSASHLHTSASQPYSSFVNHYNSPAMYSDNSSVAAQGFPSTCG
HYALSTVSNAAYPSVSYPSLPAGDPYGQQMFTSQNAPTVRPIRDNSFSGQNTAISHPSPL
PPPPSQQYHQQQSLSGYSTFAWSASGLPSTQDNLIQNHTSLATANNPTNPVADTLSCSVM
QNVQPPKSSPVVSAVLSGASSTRTPAASRPVEPLASVARPSELLQQKGMQYGEYVNNQAS
SAPTPLSSTSDDEEEEEEDEEAGVDSSSTTSSASPMPNSYDALEGGSYPDMLSSSASSPA
PDPAPAPAPAPAAPQPSKMAKPFGYGYPALQPGYQNAAAPLNSGVPPGSPAYSGFQQYAQ
QYPGMNQLSSSLGGLSLQSSSQPESLRPVNLTQERNILPMTPVWAPVPNLNLDLKKLNCS
PDSFRCTLTNIPQTQALLNKAKLPLGLLLHPFRDLTQLPVITSNTIVRCRSCRTYINPFV
SFIDQRRWKCNLCYRVNDVPEEFMYNPLTRSYGEPHKRPEVQNSTVEFIASSDYMLRPPQ
PAVYLFVLDVSHNAVEAGYLTILCQSLLENLDKLPGDSRTRIGFMTFDSTIHFYNLQEGL
SQPQMLIVSDIDDVFLPTPDSLLVNLYESKELIKDLLNALPNMFTNTRETHSALGPALQA
AFKLMSPTGGRVSVFQTQLPSLGAGLLQSREDPNQRSSTKVVQHLGPATDFYKKLALDCS
GQQTAVDLFLLSSQYSDLASLACMSKYSAGCIYYYPSFHYTHNPSQAEKLQKDLKRYLTR
KIGFEAVMRIRCTKGLSMHTFHGNFFVRSTDLLSLANINPDAGFAVQLSIEESLTDTSLV
CFQTALLYTSSKGERRIRVHTLCLPVVSSLADVYAGADVQASICLLANMAVDRSISSSLS
DARDALVNAVVDSLSAYGSTVSNLQHSGLIAPSSLKLFPLYVLALLKQKAFRTGTSTRLD
DRVYAMCQIKCQPLVHLMKMIHPNLYRIDRLTDEGAIHVNDRVVPQPPLQKLSAEKLTRD
GAFLMDCGSVFYIWIGKSCDSNFIEDVLGYPNFASIPQKMTHLPELDTLSSERARSFITW
LRDNRPLNPILHVVKDESPAKTEFFQHLIEDRTEAAFSYYEFLLHIQQQICK
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcccccgccgggtcacctcatccggccgccagttcccggatcccgcccaagctt
ggcggagccgccgcctcaggagccgccgcgcccgcgggcccgggcccggggcctcaccag
cagaacggtccggcacagaatcaaatgcaagttccatctgggtatggattgcatcctcaa
agctacactgctccctcaggacattactctcaaggacctgagaaaatgacctcattgcca
ttggatagccagtgtgatgattactactctggtctctatagggtaccaacacaaaatgtg
gtgactcctaacacagcaagcccacaaccaggagcacagcagatgtatggcagcgttcct
cctgctcctcatgtcgtgggatccactctgggatcattccaaggtgccgggtcatcagca
tcacatttgcatacgagtgcctcccagccatactcctcttttgtgaatcattacaatagt
ccagccatgtactctgacaattcttctgttgctgctcagggatttccctctacttgcggt
cactatgctttgtcaactgtttctaatgctgcatatcctagtgtttcatatccctctcta
cctgctggtgatccatatgggcagcaaatgtttacctcacagaatgctccgactgtcagg
ccaattagagataattcattttctggtcaaaatacagctatcagccatccatcaccactt
ccacctccaccatcacaacagtaccaccagcagcagagtctttcaggatacagtactttt
gcgtggtcagcttcaggccttccgtcaacccaagacaatctaatccaaaaccacacctcc
ctggctacagccaacaacccaacaaatcctgttgcagatactttgtcctgttctgtaatg
caaaatgttcagcctcccaagtccagcccagtagtatccgctgttttgtcaggagcctcg
tcaacaagaacacctgctgcaagtcgcccagttgagcctttggcctcagttgcacggccg
tcagagctattacagcagaaaggcatgcagtatggtgaatatgttaataatcaagctagc
tccgcaccaactcccttgtcatccacttccgatgatgaggaagaggaggaggaggatgag
gaagcaggtgttgacagctcttctaccacaagcagtgcttctccaatgcccaacagttat
gatgccctagaaggaggcagctatccagacatgctttcctcatcggcaagcagccctgct
cctgatcccgctcctgcccctgctccagctccagctgctcctcagccttcaaaaatggcc
aagccatttgggtatggttatccagctctgcagcctggatatcagaatgctgcagcacca
cttaattccggagtgccgcccggtagcccagcgtattctggattccagcagtatgctcag
cagtatcctggtatgaaccagctgtcctccagtctgggaggtttgagtcttcagagttct
tcacaaccagaaagtttgagacctgtaaaccttactcaggagagaaatattttacccatg
actcctgtttgggctcctgtacctaacttgaatttagacctcaaaaaattaaactgtagc
ccagattcatttcggtgtactttgacaaatattccacagacacaggctttactgaataaa
gccaagcttcctttaggattgttgttacatcccttcagagacttaacgcaattaccagtg
ataacatccaataccattgtgaggtgccgatcttgtcgaacatatatcaacccttttgta
tccttcattgatcaacgtagatggaaatgcaatttgtgctatagagttaatgatgttcct
gaagaatttatgtataatccccttacccgatcttatggagagcctcataaacggccagaa
gttcagaattcaaccgtggagttcattgcttcttcagattatatgcttcgtccacctcaa
ccagcagtttacttgtttgttttagatgtgtctcataatgcagtggaagctggatatttg
acaattttgtgccagtcactgttagaaaatctagacaagcttcctggagattcacgaaca
agaataggattcatgacctttgatagcactattcatttctacaatttacaagaaggatta
tcacagcctcagatgttgattgtatctgatatagatgatgtttttctacctacaccggat
agcttacttgtgaatctgtatgaaagtaaagagcttataaaagacttattgaatgcatta
ccaaatatgttcaccaatacaagagaaacacacagtgccctgggtcctgcgctccaggct
gcctttaaattaatgtctccaacaggtggccgtgtgtctgtatttcagacacagttacct
tccttgggggcaggacttctgcagtccagagaagatcctaatcagagatcaagcacaaag
gttgtacagcatcttggccctgcaactgatttttataagaaacttgctttagattgctct
gggcagcagactgcagtggatctgttccttttaagttcacagtactctgatctcgcttct
ctagcttgcatgtccaagtattctgcagggtgcatctattattacccatctttccactat
actcacaatccttcacaagcagaaaagttacaaaaagatctaaaacgatacctcacaaga
aaaattggatttgaagctgttatgagaataaggtgtactaaaggtctttccatgcacact
tttcatggaaacttctttgtccgttccactgacttgttatccctcgccaacatcaatcct
gatgctggatttgcagtacagctgtcaattgaagaaagtttgacggatacttccttagtg
tgctttcagacagccctgttatatacatcaagcaagggtgagcggagaattagagtgcac
acactttgcttgccagtggtcagttcgctagcagatgtgtacgcaggggctgatgtacaa
gcttccatctgcctcctggcaaacatggctgtggatcgatcaatttcatcaagtctatcg
gatgcaagagacgccttagtgaacgctgtggtggattcattatctgcatacggctcaact
gtctcaaatttacagcactctgggttgatagcacccagctccctcaagttgtttcctctc
tatgttttggcccttctcaaacagaaagcatttagaactggtacaagcacacgcctggat
gatcgtgtatatgccatgtgtcagataaagtgtcagccacttgttcatctaatgaaaatg
attcatcccaacctatacaggatagacagactgacagatgagggtgcaatacatgttaat
gacagagtggtacctcagccacctcttcagaaattgtctgcagagaaactgacacgagac
ggtgctttccttatggactgtggctctgttttttacatttggattggaaaaagctgtgac
agtaactttatagaggatgtgctcgggtatccgaattttgcatcaataccacagaaaatg
acacatcttccagagctagacaccctttcatcagaaagagctagatcctttataacctgg
cttagagacaacagaccattaaacccaattcttcacgtggtaaaagatgagagtcctgcc
aaaacagaattttttcaacatttgattgaagaccggacagaagccgcattctcttactat
gaatttttgcttcacattcagcagcagatttgtaagtga
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