Phocoena sinus (vaquita): 116754627
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Entry
116754627 CDS
T07759
Symbol
HCN3
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3
KO
K04956
hyperpolarization activated cyclic nucleotide-gated potassium channel 3
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04929
GnRH secretion
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
116754627 (HCN3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
psiu04040
]
116754627 (HCN3)
Ion channels [BR:
psiu04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
116754627 (HCN3)
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GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
116754627
NCBI-ProteinID:
XP_032489327
Ensembl:
ENSPSNG00000000564
LinkDB
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Position
1:113853199..113862255
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AA seq
786 aa
AA seq
DB search
MEAEQRPTTRASDGATPGLERAPSAAPASTTTASDPIPGSRPGTGPEPKRRQLGTLLQPT
VNKFSLRVFGSHKAVEIEQERVKSAGAWIIHPYSDFRFYWDLIMLLLMVGNLIVLPVGIT
FFKEENSPPWIVFNVLSDTFFLMDLVLNFRTGIVVEEGAEILLAPRAIRTRYLRTWFLVD
LISSIPVDYIFLVVELEPRLDTEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEE
IFHMTYDLASAVVRIFNLIGMMLLLCHWDGCLQFLVPMLQDFPPDCWVSINHMVNYSWGR
QYSHALFKAMSHMLCIGYGQQAPVGMPDVWLTMLSMIVGATCYAMFIGHATALIQSLDSS
RRQYQEKYKQVEQYMSFHKLPADTRQRIHEYYEHRYQGKMFDEESILGELSEPLREEIIN
FTCRGLVAHMPLFAHADPSFVTAVLTKLRFEVFQPGDLVVREGSVGRKMYFIQHGLLSVL
ARGARDTRLTDGSYFGEICLLTRGRRTASVRADTYCRLYSLSVDHFNAVLEEFPMMRRAF
ETVAMDRLRRIGKKNSILQRKRSEPSPGSSGGIMEQHLVQHDRDMARGVRGLAPGTGARL
SGKPVLWEPLVHAPLQAAAATSNVAIALTHQRGPLPLSPDSPVTLLARSARRSAGAGSPA
SPLVPVRAGPLLARGPWASTSRLPAPPARTLHASLSRAGRSQVSLLGPPPGGGGRRLGPR
GRPLSASQPSLPQRAAGDGSPGCKGSGGERLPPSGLLAKPPGTAQPPRPSVPEPATPRGP
QLSSNM
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggagcagaggccgacgactagggccagcgatggggcgacccctgggctggag
agggcgccttctgctgccccggcgtctacaaccacggcctcggatccgatccctgggtcc
aggcccgggaccgggcccgagcccaagaggaggcagctcgggacgctgctccagcccacg
gtcaacaagttctcccttcgcgtgttcggcagccacaaagcagtggaaatcgagcaggag
cgggtcaagtcagcgggggcctggatcatccacccctacagcgacttccggttttactgg
gacctgatcatgctcctgctgatggtggggaacctcattgtgctacctgtgggcatcacc
ttcttcaaggaggagaactccccaccttggatcgtcttcaacgtcctctctgacactttc
ttcctgatggatctggtgctcaacttccgcacaggcatcgtggtagaggagggtgctgag
atcctgctggcaccgcgggccatccgcacacgctacctgcgcacctggttcctggttgat
cttatctcctctattcctgtggattacattttcctggtggtggagctggagccacgactg
gacaccgaggtctacaaaacagctcgggccctgcgcatcgtgcgtttcaccaagatcctc
agcctgctgcggctgctccgcctttcccgcctcatccgctacatacaccagtgggaggag
atctttcacatgacctatgacctggccagtgctgtggttcgcatcttcaacctcatcgga
atgatgctgctgctatgtcactgggatggctgtctgcagttcctggtccccatgctgcag
gacttccctcccgactgctgggtctccatcaaccatatggtgaactactcgtggggccgc
cagtattcccacgccctgttcaaggccatgagccacatgctctgcattggctacgggcag
caggcacctgtgggcatgcccgacgtctggctcaccatgctcagcatgatcgtgggtgcc
acatgctacgccatgttcatcggccacgccactgccctcatccagtccctggactcttct
cggcgtcagtaccaggagaagtacaagcaggtggagcagtatatgtccttccacaagctg
ccagctgacacacggcagcgcatccatgagtactatgagcaccgctaccagggcaagatg
tttgacgaggaaagcatcctaggagagctgagcgaaccacttcgggaggagatcattaac
ttcacctgccggggccttgtggcccacatgccactgttcgcccacgccgaccccagcttc
gtcacggccgtgctcaccaagctacgctttgaggtcttccagccgggggacctcgtggtg
cgtgagggctccgtgggcaggaagatgtacttcatccagcatgggctgctcagtgtgctg
gcacgtggcgcccgggacacccgcctcactgatggatcatactttggggaaatctgtctg
ctgactcggggccgacgcacagccagtgtgcgtgctgacacctactgccgcctctactcg
ctcagcgtggaccatttcaacgccgtgctcgaggagttccccatgatgcgccgggccttc
gagacagtggccatggatcggctgcgccgcattggcaagaagaattccatactgcagcgg
aagcgctctgagccaagtccaggcagcagtgggggcatcatggagcagcacttggtgcaa
cacgacagggatatggctcggggtgttcggggcctggccccaggcacaggagctcggctc
agcggaaagccggtgctgtgggagccactagtgcacgcacccctgcaagcagccgccgcg
acctccaatgtggccattgccctgacgcaccagcggggccctctccccctctcccccgac
tctccagtcaccctccttgctcgctctgctcgaagatcagcaggagcgggctccccagcc
tccccacttgtccctgtccgagccggccctctgctggcccggggaccctgggcatccact
tcccgcctgccggccccacctgcccgaaccctccatgccagcctatcccgggctgggcgc
tcccaggtgtcactgctggggcctcccccaggaggaggtggacggcgactaggacctcgg
ggacgcccactctcagcctcccagccctctctgcctcagcgggcagcaggtgatggctct
cctgggtgtaagggctcaggaggtgaacgcctgcccccctcagggctcctggctaagcct
ccagggacagcccagccccccaggccatcagtgcctgagccagccactccccggggcccc
caactctcttccaacatgtga
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