Phocoena sinus (vaquita): 116754628
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Entry
116754628 CDS
T07759
Symbol
SEC24D
Name
(RefSeq) protein transport protein Sec24D isoform X1
KO
K14007
protein transport protein SEC24
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
116754628 (SEC24D)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psiu04131
]
116754628 (SEC24D)
Membrane trafficking [BR:
psiu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
116754628 (SEC24D)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
GDP_Man_Dehyd
Motif
Other DBs
NCBI-GeneID:
116754628
NCBI-ProteinID:
XP_032489325
Ensembl:
ENSPSNG00000000727
LinkDB
All DBs
Position
5:22507151..22618761
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AA seq
1034 aa
AA seq
DB search
MSQQGYVATPPYSQSQPGIGLSPPHYGHYGDPSHTGSPPGMMKPAGPLGAAAPGGMLPQG
HPPHGPHQFGQNGAHAQGPPLQRFPGPPPVNSAAPSYAPYSPSTQSSYPSPVSTSSVAQL
GTQLSAMHVDSYGSGMAPPGQGPPGPPSAAAAFQGPSRSPQPTILQPGSQVLPPPPTALN
GPGASPLPPSTHRQDGLPGPAPPNAQYQPPPLPGQTLGPGYPLQQAANYGPQMAGAQLSY
PGGFPGGPAQMAGPPQPQKKLDPDSIPSPIQVIENDRATRGGQVYTTNTRGQIPPLVTTD
CTIQDQGNASPRYIRCTTYCFPCTSDMAKQAQIPLAAIIKPFATIPSNETPLYLVNHGET
GPVRCNRCKAYMCPFMQFIEGGRRYQCGFCSCVNDVPPFYFQHLDHIGRRLDHYEKPELS
LGSYEYVATLDYCRKNKPPNPPAFIFMIDVSYSNIKNGLVKLICEELKTVLEKLPKEGQE
ETSSLRVGFITYNKVLHFFNVKSTLARPQMMVVTDVSEVFVPLLDGFLVSYQESQSVIHN
LLDQIPEMFADSNENETVFAPVIQAGMEALKAADCPGKLFIFHSSLPTAEAPGKLKNRDD
KKLINTDKEKILFQPQTNVYDPLAKDCVAHGCCVTLFLFPSQYVDVASLGLVPQLTGGTL
YKYNNFQVHLDSQQFLNDLRNDIEKKIGFDAIMRVRTSTGFRATDFFGGIYMNNTTDVEM
AAIDCDKAVTVEFKHDDKLSEDSGALIQCAVLYTTVSGQRRLRIHNLGLNCSSQLADLYK
SCETDALINFFAKSAFKAVLHQPLKVIREILVNQTAHMLACYRKNCASPSAASQLILPDS
MKVLPVYMNCLLKNCVLLSRPEISTDERAYQRQLVMTMGVADSQLFFYPQLRPIHTLDVK
STTLPAAIRCSESRLSEEGIFLLANGLNMFLWLGVSSPPELIQGIFNVPSFAHVNTDITL
LPELGNPYSQTLRMIMGIIQQKRPYSMKLTIVKQREQPEMVFRQFLVEDKGLYGGSSYVD
FLCCVHKEICQLLN
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaacaaggctatgtggctacacctccttattctcagtcccagcctggaataggc
ctttctccaccgcattatgggcactatggggacccatctcacacaggttctccaccaggt
atgatgaagccagcagggcctttgggggctgctgcccctggggggatgttgcctcagggc
catccgcctcatggaccccatcagtttggccagaatggagctcatgcccaaggtcctcct
cttcaaagatttcctggccctccacctgtcaacagtgcggccccctcctatgcaccatac
tcaccctctacacaatcgtcttacccaagtccagtgtccacttcttctgttgcccagctg
ggcactcagctcagtgctatgcacgtcgacagctatggttcgggcatggctccccccggc
cagggcccccctggccctccatcagcagcagcagcattccagggtccatcacggtctccg
cagccaaccatcttgcagcctggatctcaggttctcccaccaccacccactgcactaaac
ggccccggtgcctcacccttgcctccatcaacgcacagacaagatgggctccccgggcct
gctcctccgaacgcccagtaccagcccccgcctcttccaggacagaccctaggccctgga
tatcctctgcagcaggcagccaactatggcccccagatggcaggtgcacagctctcctac
ccaggaggcttccccggaggtcctgcacagatggctggtccaccgcagccccagaagaag
ctggatcctgactctatccccagcccaatccaggtgatcgagaatgacagagccaccaga
gggggacaggtttataccaccaacaccagaggccagatccctcccctggtcactacagat
tgtacgatacaagaccaaggcaatgcaagtcctcgatacatccgttgcacaacatactgt
ttcccatgcacgtcagatatggccaagcaagctcagattccattagctgccatcatcaaa
ccctttgccacgattccctcaaacgagacgcccctctacttggtaaatcatggggagact
ggaccagtcagatgcaacaggtgcaaagcctacatgtgcccattcatgcagttcattgaa
ggaggaaggaggtaccagtgtggattttgcagctgcgtgaatgatgttccaccattctat
ttccaacatctggaccacatcggaagaagactggaccactatgagaagccagaactatct
ctaggatcatatgaatatgttgctactttggattactgcagaaagaataagcctcccaac
ccaccagcctttatcttcatgattgatgtttcttatagtaacattaagaatggacttgtg
aagctcatatgtgaagaactgaagactgtgctggaaaaacttccgaaggaaggtcaggaa
gagacttcctcacttcgagtaggtttcatcacgtacaacaaagtcctccatttctttaac
gtaaagagcactttggcacggccccagatgatggtagtgaccgacgtcagcgaggtcttt
gttcctctgttggatggtttccttgtcagctatcaagaatcccaatctgtgattcacaat
ttattggaccagattccagagatgtttgcagactctaatgaaaatgagaccgtctttgct
cctgtcatccaggctggcatggaagcactaaaggcagctgactgtcccgggaagctgttc
atcttccattcctccttgccaactgcagaagcaccagggaagctcaaaaacagagatgac
aaaaaactgattaatacggacaaagagaagatccttttccagccccagacaaatgtctac
gaccctctagccaaggactgcgtggctcacggctgctgcgtgacgctcttcctcttcccc
agtcagtacgtggacgtggcctccttgggtctcgtgcctcagctcacgggaggaaccctc
tataagtacaacaatttccaggtgcacttggacagccaacaatttttgaatgacctcaga
aatgatattgagaagaaaataggatttgatgctattatgagggttcgtaccagcacaggt
ttcagagccactgacttctttggtggcatctatatgaacaacaccaccgatgtagagatg
gcagccattgactgtgacaaggcagtgactgtggagttcaagcatgatgacaaactcagt
gaagacagtggagccttaatccagtgtgccgtgctttacacgactgtcagcgggcagaga
agacttcggattcacaatctgggcttgaactgcagctcccagctggctgatctctataag
agctgcgagactgatgcccttatcaacttctttgccaagtcagcttttaaagcagttcta
caccagcccttgaaggtcatcagggaaattctggttaatcagaccgcccacatgttggcc
tgttaccggaagaattgtgctagtccgtctgcagccagccagcttatcttaccagattcc
atgaaagtactgccagtgtacatgaactgtttgttaaaaaactgtgtgctgctcagcaga
ccagagatctcaacggatgagcgggcctaccagaggcagctggtcatgaccatgggtgtg
gccgactctcagctcttcttctacccacagcttcggccaatacacacattagatgtcaag
agtacaacattacctgctgctattcgttgctctgagagccgtctttcagaagaaggaata
ttcctattggctaatggtctgaacatgttcttatggttgggagtaagtagcccaccagaa
ctcatccaaggaatatttaacgtgccatcttttgcacatgtcaacacagatataacatta
ttgcctgagctgggaaacccatactcacaaacactcagaatgataatgggtattatccaa
caaaagcggccatattcaatgaagctcacaatagtaaagcagcgagaacagccagaaatg
gttttccgacagttcctggtagaagacaaaggactttatggaggatcatcctatgtggat
ttcctttgctgtgttcacaaggagatctgtcagctgcttaattaa
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