Phocoena sinus (vaquita): 116754766
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Entry
116754766 CDS
T07759
Symbol
NKX1-1
Name
(RefSeq) NK1 transcription factor-related protein 1
KO
K09309
homeobox protein Nkx-1
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psiu03000
]
116754766 (NKX1-1)
Transcription factors [BR:
psiu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
116754766 (NKX1-1)
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GFIT
Motif
Pfam:
Homeodomain
Motif
Other DBs
NCBI-GeneID:
116754766
NCBI-ProteinID:
XP_032489578
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Position
5:complement(724184..727757)
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AA seq
433 aa
AA seq
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MSASGPAATGDGPALPPPPPGPGPGPAPPAPAAARDAMDGRAELPAFPRAGAPPLAASDT
VPAAPEGAGAARPGPPPRPTSFSVLDILDPNKFNSRRRRCVLLGPVAPAACAPAPAAPGR
PPRSEELERRALAAAGGAGAGTGAEPPHAGDPCKADEAEANGYSSGGGRSPSADSGDEAP
DDEDEDEDEAPEAGAARGAEARGGGSGLGARGSGCQGEAEAPPGAVDEAAVPGPRGNSPG
APGPPGASAAPGDAGTTPQGAATATKPKRKRTGSDSKSGKPRRARTAFTYEQLVALENKF
KATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNPGADTSAPTGGGGGPGPGSG
PGAGLPGGLSPLSPSPPMGAPIAMHGPAGYPAHGPGGLVCAAQLPFLSSPAVLSPFVLGS
QTYGAPAFYAPHL
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgagcggcccggcggctaccggggacggccccgcgctgccgccgccgccgccc
gggcccggtccggggcccgcaccgcccgcgcccgccgccgcccgggacgccatggacggg
cgtgctgagctgcccgccttcccgcgggccggagccccgccgctcgccgccagcgacacg
gtgcccgcggcgcccgagggggctggggcggcccggcccggcccgccgccgcgccccacc
tccttctcggtgctggacatcctggaccccaacaagttcaacagcagaagacgccgctgt
gtgctgctgggccccgtggcgcccgcggcgtgcgccccggcccccgccgccccgggacgc
ccgccgcgctcagaggagctggagcgccgtgccctcgccgccgccggaggagctggagcc
ggtaccggagctgagccgccgcacgccggcgacccctgcaaggcggacgaggccgaggcc
aacggctacagcagcggcggtggccgcagcccgagcgcggacagcggggacgaggcgccc
gacgacgaggacgaggacgaggatgaggcgcccgaggcgggggcggcgcgcggcgctgag
gcgcggggaggcggcagcggcctcggggcccgcgggtcgggctgccagggcgaggccgag
gcgcccccaggcgctgtcgatgaggccgctgtccccggcccccgtgggaactcgcccgga
gccccgggcccgccgggagcctcggcggcgcccggggacgcggggacgaccccgcagggc
gcggcgacggcgacgaagcccaagcggaagcgcacgggctccgactccaagtccgggaag
ccgcggcgcgcgcgcaccgccttcacctacgagcagctcgtggcgctggagaacaagttc
aaggcgacgcgctacctgtcggtgtgcgagcgcctcaacctggcgctgtcgctgagcctc
accgagacgcaggtgaagatctggttccagaaccgccgcaccaagtggaagaagcagaac
ccgggcgccgataccagcgcgccgaccggcggcggagggggaccggggccgggttccggg
ccgggtgcggggctgcccggtggcctcagcccgctcagcccgtcgccgcccatgggcgcg
ccgatcgccatgcacggcccggccgggtacccggcgcacggccccggcggcctggtgtgc
gccgcacagctgccctttctgtcgagcccggcggtgctgtcgcccttcgtgctgggctcg
cagacctacggcgcgcccgccttctacgcgccgcacctctga
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