Phocoena sinus (vaquita): 116754950
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Entry
116754950 CDS
T07759
Name
(RefSeq) LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein K-like
KO
K12886
heterogeneous nuclear ribonucleoprotein K
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu03040
Spliceosome
psiu05203
Viral carcinogenesis
psiu05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116754950
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
116754950
05203 Viral carcinogenesis
116754950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psiu03041
]
116754950
Spliceosome [BR:
psiu03041
]
Common components
Common spliceosomal components
hnRNP proteins
116754950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
ROKNT
KH_2
KH_KhpA-B
Glyco_tran_WecG
Motif
Other DBs
NCBI-GeneID:
116754950
NCBI-ProteinID:
XP_032489734
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Position
6:22040880..22059939
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AA seq
463 aa
AA seq
DB search
METEQPEETFPNTRTNGKFGKRLAEDMEDEQAFKRSRNTDERVELRILLQSKNPGEVIGK
GGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTLEEGLHLPSPTAT
SQVPLESDAVECLNYQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELQENTQTTIKL
FQECCSHSTDRVVLIGGKPDMVVECIKIILDLISESPIKGRAQPYDPNFYNETYDYGGFT
MMFDDCCGCPVGFPCXGKGSFDRMPPGRCGRPMPPSRRDYDDRSPRRGPPPPPPGQGGPG
GGRAWNLLLPPPPPPREGDLMAYDRRGRPGDHYDGVVGFSADETWDSAVDTWSPSEWQMA
YEPQGGSGCDFSYAGGRGSYGDLGGPIITTQVTVPKDLAGSIIGKGSQWIKQTRHGSGAL
IKIDEPLEESEDRIITITGTRAQIQNAQDLLQNSVKQYSGKFF
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggaaactgaacagccagaggaaacctttcccaacaccagaaccaatggcaaatttggt
aaacgccttgctgaagatatggaagacgaacaagcttttaaaagatctagaaacactgat
gagagggttgaattacgcattctgcttcagagcaagaatcctggggaagtgattggaaaa
ggaggcaagaatattaaggctctccgtacagactacaatgccagtgtttcagtcccagac
agcagtggccctgagcgcatattgagtatcagtgctgatattgaaacaattggagaaatt
ctgaagaaaatcatccctaccttggaagagggcctgcatttgccatcacccactgcaacc
agccaggtcccgctcgaatctgatgctgtggaatgcttaaattaccaacactataaagga
agtgactttgactgcgaattgagactgttgatccatcagagtctggctggaggaattatt
ggggtcaaaggtgctaaaatcaaagaacttcaagagaacactcagacaacaatcaagctt
ttccaggaatgttgttctcattccactgacagagtcgttcttattggaggaaaacctgat
atggttgtagagtgcataaagatcatccttgatcttatatcagagtctcccatcaaagga
cgtgctcagccttatgatcccaatttttacaatgaaacctatgattatggtggttttaca
atgatgtttgatgactgttgtggatgtcccgtgggtttcccatgtnggggaaaaggtagt
tttgacagaatgcctcctggtcgttgtgggcgtcccatgcctccatccagaagagattat
gatgataggagccctcgccgaggacctcctccacctcctcctggacaagggggcccgggt
ggtggcagagcttggaatcttcttcttcctccaccaccaccacctagagaaggagatcta
atggcctatgacagaagagggagacctggagaccattatgatggcgtggttggtttcagt
gctgatgaaacctgggactctgcagtagatacatggagcccatcagagtggcagatggct
tatgaaccacagggtggctctggatgtgatttttcctatgctgggggtcgtggctcatat
ggtgatcttggtggacctattattactacacaagtaactgttcccaaagatctggctgga
tctattattggcaaaggtagtcagtggattaaacaaacccgtcatgggtcaggagctttg
atcaaaattgatgagcctttagaagagtccgaagatcggatcattaccattacaggaaca
cgggcccagatacagaatgcacaggatttgctgcagaacagtgtgaagcagtattctgga
aagtttttctaa
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