Phocoena sinus (vaquita): 116755106
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Entry
116755106 CDS
T07759
Symbol
ADAMTS13
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 13 isoform X1
KO
K08627
a disintegrin and metalloproteinase with thrombospondin motifs 13 [EC:
3.4.24.87
]
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04611
Platelet activation
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
116755106 (ADAMTS13)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
psiu01002
]
116755106 (ADAMTS13)
Enzymes [BR:
psiu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.87 ADAMTS13 endopeptidase
116755106 (ADAMTS13)
Peptidases and inhibitors [BR:
psiu01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
116755106 (ADAMTS13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_CR_3
ADAMTS_spacer1
TSP_1
ADAMTS_CR_2
Reprolysin
Reprolysin_3
Adt-1
TSP1_spondin
Reprolysin_4
Reprolysin_5
Reprolysin_2
Peptidase_M10
TSP1_CCN
Motif
Other DBs
NCBI-GeneID:
116755106
NCBI-ProteinID:
XP_032489876
Ensembl:
ENSPSNG00000007316
LinkDB
All DBs
Position
6:2049594..2082130
Genome browser
AA seq
1505 aa
AA seq
DB search
MPWLWQYLDQRHSPAGLSHSTPARLQSLSLPGRMSELRLQGRCVRAILISVPLVLLGCWG
LPDFRQQFLQALEPEEVTAYFGPDVASEGPWLSALPPAPPGRPPAPRLRRQAARSLLHLE
LLVAVGPDVHRAHREDTERYVLTNLNMGSELLRDPSLGAQFRVHLVKTVILTQPEDAPNI
TANITASLLSVCEWSRTVNPEDDTDPGHADLVLYITRFDLELPDGNRQVRGVTQLGGVCS
PSWSCLIIEDTGFDLGVTIAHEIGHSFGLEHDGAPGSGCGPSGHVMASDGAAPARGGPAW
SPCSRRQLLSLLSAGRARCVWDPPGPQSQPVGRHPEAHPGLYYGADEQCRVAFGPTAVAC
TFRREHLDMCQALSCHTDPLDQSSCSRLLIPVLDGTECGVGKWCSKGHCRSLAELAPVGA
VHGHWSSWGLASPCSRSCGGGVVTRRRQCNNPRPAFGGHACVGADLQAKMCNSQACEKTQ
LEFMSEQCAQTNGEPLHLSPGSTSFYRWGTAEQYSRGDALCRYLCRAIGESFIVRRGDSF
LDGTRCVPSSPQEDGTLSLCVSGSCKTFGCDGRMGSGQVRDVCQVCGGDNSTCRPQNGSF
TAGRAREYVTFLTVTPNLTSIYIINHRPLFTHLAVRIRGRYVVAGNASISPSTTYPSLLE
DSHIQYKVTLTEDRLPRLEEIRIQGPTQDDMEIQVYRRYGEEYGSLARPDITFTYFQPKR
RLAWAWAPVRGACSVSCGAGLRWVTHSCRDQAANEWVEAAWCAGSRQPAAWSESCASIPC
PPYWAAGDFGPCSASCGGGLQERVVRCVEAQGGLLRTVPHFWCRALAQQPAAVETCNPQP
CPRREMPDACSSACGTDPAVQNTTCVQGADGMGAPATAGPCSADEKLPALEPCIEVACPP
GWGHSDAQSPGEKAASPAGSARPEAYATHVWTPLAGPCSVSCGQGLMELRFMCMDSALRT
PVREELCDLAGKPGSRQEVCQAAPCPAWWETRALAPCPVTCGGGQVPLAVRCVRMDQGRV
VSLPHSKCWPMPRPRPLEDCSLEPCPARWRYQLAACSVTCGGGVAQRILYCARAHGEDKA
EEILPDTQCQGLPRPEQQEACSPEPCPPRWKVMSLGPCSASCGLGTAMRSVACVQLDQGQ
DTEVDGAACVGLVRPQASIPCIIADCTYRWHVSAWMQCSVSCGDGIQRRHDACLGPQAQV
PVPADFCQHLPKPVTVRGCWAGPCAGQGTPSPVPHEESTAPGQTTAATASPQWPQPQAHL
LSPAPRPQGLPPGPQESPAESSACGWQHLEPTGTIDMRGPARADCAVAIGRPLGEVVTLR
VLDSSLNCSAGEMLLLWGRLTWRKMCRKLPGLTFSSKANTLVVKQRLVQLRGGVLFRYSS
QPAPGAFHRGCDMQLFGPRGEIVSPSLSPDGRNMGGCRIFIDVAPQARIAIRALAMDMGT
RTEETDSSYILIRDIHSLRTMTFRGQQTLYWESEGSQAEMEFSQGFLEAHTSLRGQYWTL
QARTY
NT seq
4518 nt
NT seq
+upstream
nt +downstream
nt
atgccttggctctggcaatacctggatcagcgacacagcccagcgggtctgtcgcattcc
acgccggccagattgcagtcgctctcccttcctgggaggatgagtgagcttcgcctccag
gggagatgtgtgcgggcaattctcatctctgtgcccctcgtcctcctgggctgctgggga
ctccctgatttccggcagcagtttcttcaggctttggagccagaggaagtgaccgcttac
tttggccctgacgttgcctccgaaggaccctggctctcggccctgccccccgccccgcca
ggccgtcctcccgcccctcgcctgcggagacaggctgccaggagcctcctgcacctggag
ctgctggtggccgtgggccccgacgtgcaccgggctcaccgggaggacacggagcgctac
gtgctcaccaacctcaacatggggtcagagctgcttagggacccatccctgggagctcag
ttccgagtgcacctggtgaagacggtcatcctgacgcagcctgaggatgctccgaatatc
acagccaacatcaccgcatcactgctgagcgtctgtgagtggagcaggacggtcaaccct
gaggatgacacggatcccggccatgctgacctggtcctctacatcaccaggtttgacctg
gaattgcctgatgggaaccggcaggttcggggggtcacccagctgggtggcgtctgctcc
ccctcctggagctgccttatcattgaggatactggcttcgatctgggggtcaccatcgcc
catgagattgggcacagcttcggcctggagcacgacggcgcgccgggcagcggctgcggg
cccagcggacacgtgatggcttccgacggcgccgcgcccgcccgcggaggcccggcgtgg
tccccctgcagccgccggcagctgctgagcctgctcagcgcaggacgggcgcgctgcgtg
tgggacccgccggggccgcagtcccagcccgtggggcgccatcccgaggcgcaccccggc
ctgtactatggcgccgacgagcagtgccgcgtcgccttcggcccgacggcggtcgcctgc
accttccgcagggagcacctagacatgtgccaggctctctcctgccacacagaccccctg
gaccaaagcagctgtagccgcctccttattcctgtcctggatgggacagagtgtggcgtg
gggaagtggtgctccaaggggcactgccgctccctggcggagctggcccccgtgggggcg
gtgcacgggcactggtctagctggggtctggccagtccttgctcccgctcctgcggagga
ggtgtggtcaccaggagacggcagtgcaacaaccccagacctgcctttggggggcatgcg
tgcgtaggtgctgacctccaggccaagatgtgcaacagccaggcctgcgagaagacccag
ctggagttcatgtcggagcagtgcgcgcagaccaacggggagcccctgcacctctccccg
ggcagcacctccttctaccgctggggcacggccgagcagtacagtcgaggggacgctctg
tgtagatatctgtgccgggccattggcgagagcttcattgtgaggcgtggggacagtttc
ctggatgggacacggtgtgtgccaagcagccctcaggaggatgggaccctgagcctgtgc
gtgtcgggcagctgcaagacgtttggctgtgacggcaggatgggctctgggcaggtgcga
gatgtgtgccaggtgtgtggcggggacaacagcacgtgccgtcctcagaacggctctttc
acggccggaagagccagagagtatgtcacattcctgaccgttacccccaacctgaccagc
atatacatcatcaaccacaggcctctcttcacgcacctggcagtgaggatccgtgggcgc
tacgtcgtggccggaaatgcaagcatctctcccagcaccacctacccctccctcctggag
gacagccacatccagtacaaagtgaccctgactgaggaccggctgccccgcctggaggag
atccgcatccagggccccacccaggacgacatggagatccaggtttacaggcgctacggt
gaggagtacggcagcctcgcccgcccagacatcaccttcacctacttccagcccaagcgt
cggctggcctgggcgtgggctcccgtgcggggggcctgctcggtgagctgtggggcaggg
ctgcgctgggtgacccacagctgtcgggaccaggcagcgaacgagtgggtggaggctgcc
tggtgcgcagggagccggcagccggcggcatggtccgagtcgtgtgcctccataccctgt
cccccgtactgggcggccggagacttcggcccatgcagtgcctcctgcggagggggcctg
caggagcgggtggtgcgctgcgtggaggcccagggaggcctcctgaggacggtgccccac
ttctggtgcagagcgctggctcagcagccagcggccgtggagacctgcaatccccagccc
tgcccccggagggagatgccggatgcgtgctcgtcggcctgtggaacagatccggccgtg
cagaacacaacgtgtgtgcagggggcagatggcatgggggcgccagcaactgctgggccc
tgctccgcagacgagaagctgcctgccctcgagccctgtatcgaggtggcatgtcctccg
ggctggggccattcagatgcccagtctccaggggagaaggctgcatccccggcgggcagt
gccaggccagaggcttatgccacacacgtgtggactcccttggcggggccgtgctccgtc
tcctgtggtcaaggcctgatggagctgcgtttcatgtgcatggactctgccctcaggaca
cccgtccgggaagagctgtgtgacctggcaggcaagcctgggagccggcaggaggtctgc
caggctgccccgtgcccggcttggtgggagacccgagccttggcaccgtgccccgtgacc
tgtggcggggggcaggtgccactggctgttcgctgtgtgaggatggaccaaggccgcgtt
gtctccctgcctcattccaagtgctggccgatgcctcggcccaggcccctcgaggactgc
agcctggagccctgccctgccaggtggcggtaccagctggcggcctgcagcgtgacctgt
gggggaggagttgcgcagaggatcctgtactgcgcccgggcccacggggaggacaaggcc
gaggagatcctgccggacacccagtgccaggggctgcctcgcccagagcagcaggaggcc
tgcagcccggagccctgcccgcccaggtggaaggtcatgtcccttggcccatgttcagcc
agctgtggtctcggcactgccatgcgctcggtggcctgtgtgcagctggaccaaggccag
gacacagaggtggacggggcggcctgtgtaggtctggtgcggccgcaggccagcatcccc
tgcatcatcgccgactgcacctaccggtggcacgtcagcgcctggatgcagtgctctgtc
tcgtgtggggatggcatccagcgccggcacgacgcctgcctcggaccccaggcccaggtg
cccgtgccagccgacttctgccagcatttgcccaagccggtgacggtgcggggctgctgg
gctgggccctgtgcagggcaggggacacccagcccggtgccccacgaggaatccactgct
cctggccagaccacagctgccactgcttccccgcagtggccccagccccaggcccacctc
ctctccccagctccccggccgcaaggactcccgcccgggccccaggaaagcccagcggag
tccagcgcctgtggctggcagcaccttgagccgacaggaaccattgacatgcgaggccca
gcgcgggcggactgtgcagtggccatcgggcggcccctgggtgaggtggtgaccctccga
gtcctcgacagttccctcaactgcagtgctggggagatgctgctgctttggggcaggctc
acttggaggaagatgtgcaggaagctgcccggcctgactttcagctccaaagccaacacg
ctggtggtgaagcagcgtctcgtgcagctgcgaggcggagtgctttttcggtattcgagc
cagcctgccccgggagccttccaccgaggatgtgacatgcagctctttggaccccggggt
gaaatcgtgagtccatcattgagcccggatgggaggaacatggggggctgccgaatcttc
atcgacgtggccccacaggcccggatcgccatccgtgccctggccatggacatgggcacc
agaaccgaggaaacggattccagctacatcttgatccgggatatccacagcctgaggaca
atgacatttcgtgggcaacagacgctctactgggagtcagagggcagccaggcagagatg
gagtttagccagggcttcctggaggcgcacaccagccttcggggccagtactggaccctc
caggctagaacttattag
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integrated database retrieval system
