Phocoena sinus (vaquita): 116755108
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Entry
116755108 CDS
T07759
Symbol
KCNT1
Name
(RefSeq) potassium channel subfamily T member 1 isoform X1
KO
K04946
potassium channel subfamily T member 1
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
psiu04040
]
116755108 (KCNT1)
Ion channels [BR:
psiu04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
116755108 (KCNT1)
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Gene cluster
GFIT
Motif
Pfam:
Slo-like_RCK
BK_channel_a
Ion_trans_2
Ion_trans
TrkA_C
Motif
Other DBs
NCBI-GeneID:
116755108
NCBI-ProteinID:
XP_032489891
Ensembl:
ENSPSNG00000004784
LinkDB
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Position
6:complement(1770313..1827327)
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AA seq
1020 aa
AA seq
DB search
MAPLPAERLPPSHPAHPVGHVQPGPHPLLYPDVLGLHGARPRPRSQAGRGPAATPIPGSR
TCGIQHLERAGGNLSLLTSFYFCIVTFSTVGYGDVTPKIWPSQLLVAIMICVALVVLPLQ
FEELVYLWMERQKSGGNYSRHRAQTEKHVILCVSSLKIDLLMDFLNEFYAHPRLQDYYVV
ILCPTEMDIQVRRVLQIPLWSQRVIYLQGSALKDQDLMRAKMDNGEACFILSSRNEVDRT
AADHQTILRAWAVKDFAPNCPLYVQILKPENKFHVKFAEHVVCEEECKYAMLALSCICPA
TPTLITLLVHTSRGQEGQDSPEQWQRMYGRCSGNEVYHIRMGDSKFFREYEGKSFTYAAF
HAHKKYGVCLIGLKREESKSILLNPGPRHILAASDTCFYINITKEENSAFIFKQEEKQKK
KGFAGQGLYEGSSRLPVHSIIASMGTVAMDLQNTECQPAQSGGGSGGSKLALPTENGSGS
RRPSIAPVLEVADSSTLLPCDLLSDQSEDEEGLSVGEYVKGYPPNSPYIGSSPTLCHLLP
VKAPFCCLRLDKGCKHNSYEDAKAYGFKNRLIIVSAETAGNGLYNFIVPLRAYYRPRREL
NPIVLLLDNRPDHHFLEAICCFPMVYYMEGSVDNLDSLLQCGIIYADNLVVVDKESTMSA
KEDYMADAKTIVNVQTMFRLFPSLSITTELTHPSNMRFMQFRAKDSYSLALSRLEKRERE
NGSNLAFMFRLPFAAGRVFSISMLDTLLYQSFVKDYMIPITRLLLGLDTTPGSGYLCAMK
VTEDDLWICTYGRLFQKLCSSSAEIPIGIYRTECHVFSSSEPHNLRAQSQVSVSVEHHEE
TREAQGPWGSRAGTGGGGHTVGGGSAEHPLLRHKSLPWARRLSRKGARHTGKAAEEISQQ
RLRLHQRSERQELSELVKNRMKHLGLPTTGYEDVANLTASDVMNRVNLGYLQDEINDQQN
TLSYVLINPPPDTRLEPNDIVYLIRSDPLAHVASSSRSRKSSCSNRLASCSPETRDETQF
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atggcgccacttcccgcagaacgacttccaccgagccatcctgcgcacccagtcggccat
gttcaaccaggtcctcatcctcttctgtaccctgatgtgcttggtcttcacggggcccgg
cctcgccccaggagccaggccggccgaggccctgccgccacccccatccccggttccagg
acctgcggcatccagcacctggagcgcgcgggcggcaacctgtccctgctgacgtctttc
tacttctgcatcgtcaccttctccaccgtgggctacggagatgtgacgcccaagatctgg
ccgtcccagctgctggtggccatcatgatctgcgtggccctcgtggtgctcccgctgcag
tttgaggagctcgtctacctgtggatggagcggcagaagtcggggggcaactacagccgc
caccgggcccagacggagaagcacgtgatcctctgtgtcagttccctcaagatcgacctg
ctcatggactttctgaatgagttctacgcccacccccggctgcaggactactacgtcgtc
atcctgtgccccaccgagatggacatccaggttcgcagggtcctgcagatccccctgtgg
tcccagcgagtcatctacctgcagggctccgcgctcaaggaccaggacctcatgcgggcc
aagatggacaacggggaggcctgctttatcctcagcagccggaacgaggtggaccgcacc
gcagcggaccaccagaccattctgcgcgcctgggctgtgaaggactttgctcccaactgc
cctctctacgtccagatcctcaagcctgagaacaagtttcacgtcaagtttgcagagcac
gtggtgtgtgaggaggaatgcaagtacgccatgctggccctgagctgcatctgcccggcc
acgcccaccctcatcacgctgctggtgcacacgtcccgcggccaggaaggccaggactca
ccggagcagtggcagcgcatgtacggacgctgctcgggcaacgaggtctaccacatccgc
atgggggacagcaagttcttccgcgagtacgagggcaagagcttcacctacgctgccttc
cacgcgcacaagaagtacggcgtgtgtctcatcggcctgaagcgggaggagagtaagagt
atcctgctgaacccggggccccggcacatcctggccgcctccgacacctgcttctacatc
aacatcaccaaggaggagaactcggccttcatcttcaagcaggaggaaaagcagaagaag
aagggcttcgcggggcaggggctgtacgaggggtcgtcccgcctgcccgtgcacagcatc
atcgcctccatggggacagtggccatggacctccagaacacggagtgccagccagcacag
agcggcggaggcagtgggggcagcaagctggcactccccacggagaacggctcgggcagc
cggcggcccagcatcgcgcccgtgctggaggtggccgacagctcgaccctgctgccctgc
gacctgctcagtgaccagtcggaggacgaggaggggctgtctgtgggggagtacgtgaag
ggctacccccccaactcgccctacattggcagctcccctaccctgtgccacctcctgccc
gtgaaagcccccttctgctgcctgcggctggacaagggctgcaagcacaacagctacgag
gacgccaaggcctatggcttcaagaacaggctgatcatcgtgtcggcggagacggcgggc
aacgggctgtacaacttcatcgtgccactccgcgcctactaccggccccgcagagagctc
aatcccatcgtgctgctgctggacaacaggcctgaccaccacttcctggaggccatctgc
tgcttccccatggtctactacatggagggctccgtggacaacctggacagcctgctgcag
tgtggcatcatctacgccgacaacctggtggtggtggacaaggagagcaccatgagtgcc
aaggaggactacatggccgacgcaaagaccattgtcaacgtgcagaccatgttccggctc
tttcccagcctcagcatcaccacggagctcacccacccgtccaacatgaggttcatgcag
ttccgcgccaaggacagctactctctggctctttccaggctggagaagagggagcgggag
aacggctccaacctggccttcatgttccgcctgcccttcgccgccggccgcgtcttcagc
atcagcatgttggacacgctgctgtatcagtccttcgtgaaggactacatgatccccatc
accaggctgctcctggggttggacaccacgccgggctcgggctacctctgtgccatgaag
gtcacagaggacgacctgtggatctgcacctatggccgcctcttccagaagctgtgctca
tccagcgccgagatccccatcggcatctacaggaccgagtgccacgtcttctcctcctcg
gagcctcacaacctcagggcccagtcccaggtctcggtgagcgtggagcaccacgaggaa
acccgggaggcgcaggggccctggggctcacgggcaggcacgggtggcggcgggcacacg
gtgggcggcggctcggcggagcacccactcctgcggcacaagagcctgccgtgggcacgg
aggctgagccgcaagggcgcccggcacacggggaaggcggccgaggagatcagccagcag
cggctccgcctgcaccagcggtccgagcggcaggagctctccgagctggtcaagaaccgc
atgaagcatctggggctgcccaccactggctacgaggatgtagcaaatttaacagccagt
gatgtcatgaatcgggtaaacctgggatatttgcaagacgagataaacgaccaacagaac
accctctcctatgtgctcatcaaccccccgccggacacgcggctggagcccaacgacatc
gtgtatctcatccgctccgaccccctggcccacgtggccagcagctcccggagccggaag
agcagctgcagcaacaggctggcttcctgcagccccgagacgcgggacgagacgcagttc
tga
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