Phocoena sinus (vaquita): 116755152
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Entry
116755152 CDS
T07759
Symbol
RABGAP1
Name
(RefSeq) rab GTPase-activating protein 1 isoform X1
KO
K20284
Rab GTPase-activating protein 1
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psiu04131
]
116755152 (RABGAP1)
Membrane trafficking [BR:
psiu04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
116755152 (RABGAP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3694
PID
PTB
UPF0242
ERM_helical
Motif
Other DBs
NCBI-GeneID:
116755152
NCBI-ProteinID:
XP_032489992
Ensembl:
ENSPSNG00000016790
UniProt:
A0A8C9CIR9
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All DBs
Position
6:complement(12027766..12188198)
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AA seq
1069 aa
AA seq
DB search
MDDKASVGKISVSSDSVSTLNSEDFVLVSRQGDETPSTNNGSDDEKTGLKIIGNGSEQQL
QKELADVLMDPPMDDQPGDKELVERSQLDGEGDGPLSNQLSASSTINPVSLVGLQKPEMS
LPVKPGQGDSEGSSPFTPVADEDSVVFSKLTYLGCASVNAPRSEVEALRMMSILRGQCQI
SLDVTLSVPNVSEGTVRLLDPQTNTEIANYPIYKILFCVRGHDGTPESDCFAFTESHYNA
ELFRIHVFRCEIQEAVSRILYSFATAFRRSAKQTPLSATTAPQTPDSDIFTFSVSLEIKE
DDGKGYFSAVPKDKDRQCFKLRQGIDKKIVIYVQQTTNKELAIERCFGLLLSPGKDVRNS
DMHLLDLESMGKSSDGKSYVITGSWNPKSPHFQIVNEETPKDKVLFMTTAVDLVITEVQE
PVRFLLETKVRVCSPNERLFWPFSKRSTTENFFLKLKQIKQKERKNNTDTLYEVVCLESE
SERERRKTTASPSIRLPQSGSQSSMIPSPPEDDEEEDNDEPLLSGSGDVSKECAEKILET
WGELLSKWHLNLSVRPKQLSSLVRSGVPEALRGEVWQLLAGCHNNDHLVEKYRILITKES
PQDSAITRDINRTFPAHDYFKDTGGDGQDSLYKICKAYSVYDEEIGYCQGQSFLAAVLLL
HMPEEQAFSVLVKIMFDYGLRELFKQNFEDLHCKFYQLERLMQEYIPDLYNHFLDISLEA
HMYASQWFLTLFTAKFPLYMVFHIIDLLLCEGISVIFNVALGLLKTSKDDLLLTDFEGAL
KFFRVQLPKRYRSEENAKKLMELACNMKISQKKLKKYEKEYHTMREQQAQQEDPIERFER
ENRRLQEANMRLEQENDDLAHELVTSKIALRKDLDNAEEKADALNKELLMTKQKLIDAEE
EKRRLEEESAQLKEMCRRELDKAESEIKKNSSIIGDYKQICSQLSERLEKQQTANKVEIE
KIRQNVDDCERCREFFNKEGRIKGISSAKEVLDEDTDEEKETLKNQLREMELELAQTKLQ
LVEAECKIQDLEHHLGLALNEVQAAKKTWFNRTLSSIKTATGVQGKETC
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atggatgacaaggcttctgttggaaaaatcagtgtctcctcagactctgtgtctactctt
aatagtgaagattttgtcttggtttccaggcaaggagatgagacaccatctacaaataat
ggaagtgatgacgagaaaacaggactcaagattatagggaatggaagtgaacagcagctg
caaaaagagctagcagatgtgctgatggatcctccaatggacgaccagccaggggacaag
gagcttgtggaaaggtcacagttggatggcgaaggagatggacctctttctaatcaactc
tcagcttcatccaccattaaccctgtgtcattagtagggctccagaaaccagagatgagc
ctgccagtgaaacctggacaaggagattctgaagggtctagtcctttcacgccagtggct
gatgaggacagtgtagttttcagcaaactaacttatttaggctgtgcctcagtaaatgct
cccaggagtgaagtggaagccttaaggatgatgtccatcttaaggggccagtgtcagatt
tcactagatgtaaccctgtcagtgccgaacgtatctgaaggaactgtgagactcttagat
cctcagacaaacactgaaatagcaaactaccctatctacaaaatcctcttctgtgttaga
gggcatgatggaactcctgagagtgactgttttgctttcactgaaagtcattacaatgca
gagctcttcagaatacatgtcttccggtgtgaaatacaagaagctgtgagccggatactt
tacagttttgccactgccttccgccgttctgccaagcagacccccctctcagcaactact
gcacctcagactcctgacagtgacatctttaccttctctgtgtctttagaaataaaagaa
gatgatgggaaaggttattttagtgcagttcctaaagataaagacagacaatgctttaaa
ctacgccaaggaattgataaaaagattgtcatctatgtgcaacaaacaactaataaggaa
cttgccattgaaaggtgttttggtcttctccttagcccaggaaaagatgtacgaaatagt
gacatgcacttgttagatttggaatctatgggcaaaagttcagatggaaagtcctatgtt
attactgggagctggaatccaaaatctccacattttcagattgtaaatgaagaaactcct
aaagataaagtgctgtttatgaccacagctgttgatttagtaataacagaagtgcaggag
cctgttcgctttctcctagagacaaaagtccgagtttgctcacctaatgaaagattgttc
tggcccttcagcaaacgtagtactactgaaaatttctttttgaaactaaaacagataaag
caaaaggagagaaagaacaatactgacactttatatgaagttgtatgcttggaaagtgaa
tcagagagagagaggaggaaaactacagccagtccctcaattcgcctgccacagtctgga
tctcagagttcaatgataccttctcctccagaagacgatgaagaggaagataacgatgaa
cctctcttgagtggatctggtgatgtatccaaagaatgtgcagagaaaattcttgaaaca
tggggagaactgctgtctaaatggcatcttaacttgagtgtgaggccaaagcagttgtca
tccttagtaagaagcggtgttcctgaagctcttcgaggagaagtctggcagctgctagca
ggttgtcacaacaatgaccacctggtagaaaagtaccgaattctcatcacaaaggagtct
ccccaggacagtgctatcactcgtgatattaaccggacattcccagcacatgactacttt
aaggacacaggaggagatggacaagattccttatataaaatatgcaaggcttattctgtg
tatgatgaagaaattggctattgccagggccagtcatttcttgctgctgttctgcttctc
catatgcctgaggaacaggcattcagtgttctggtcaagatcatgtttgactatggtctc
agggaacttttcaagcaaaactttgaagatttgcattgcaaattttaccagttggagcgc
ctcatgcaggaatacattcctgacttgtacaaccacttcctggatataagccttgaagca
cacatgtatgcctcccagtggtttcttacgctcttcactgcaaaattccctctctacatg
gtcttccatatcatcgacctgcttttatgtgagggaataagtgttatttttaatgtcgcc
cttggattattaaagacttccaaagatgacttgctattgacagactttgaaggtgcgctg
aagttcttcagggttcagcttcctaagagatatcgctcagaagaaaatgcaaaaaaactg
atggaattagcttgcaacatgaagattagtcagaagaagttgaaaaaatatgaaaaagaa
tatcacaccatgagggaacagcaggcccaacaagaagaccccatcgagcgatttgagcgg
gagaataggcgtctacaagaagctaacatgaggttggaacaggaaaatgatgacttagcc
catgagctggtgaccagtaagattgcactgcgaaaggacctggataatgctgaggaaaag
gcagatgcactgaataaggagctgcttatgaccaaacagaaattgattgatgcagaggaa
gagaaaagacggctggaagaagagtctgctcagttaaaagaaatgtgccgtcgggaactc
gacaaggcagaatctgagattaaaaaaaacagttctatcatcggtgactacaagcagatt
tgttctcagttgagtgaaagattagagaagcagcagactgctaataaagtggaaattgaa
aaaattcggcaaaatgtggatgactgtgagcgctgccgggaatttttcaacaaagaaggg
cgcataaagggcatcagctcagctaaggaagttttggatgaggacacagatgaggagaag
gaaacactcaagaaccagctgagagagatggaactggaactggcacaaaccaagctgcag
ctggtggaagctgagtgtaagatccaggacttggagcaccatttaggccttgccctcaac
gaggtacaggcggccaagaagacatggtttaaccgaacactgagctccataaagacggca
actggggttcaagggaaagagacttgctga
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