Phocoena sinus (vaquita): 116755217
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Entry
116755217 CDS
T07759
Symbol
POMT1
Name
(RefSeq) protein O-mannosyl-transferase 1 isoform X1
KO
K00728
dolichyl-phosphate-mannose-protein mannosyltransferase [EC:
2.4.1.109
]
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu00514
Other types of O-glycan biosynthesis
psiu00515
Mannose type O-glycan biosynthesis
psiu01100
Metabolic pathways
Module
psiu_M00872
O-glycan biosynthesis, mannose type (core M3)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00515 Mannose type O-glycan biosynthesis
116755217 (POMT1)
00514 Other types of O-glycan biosynthesis
116755217 (POMT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
psiu01003
]
116755217 (POMT1)
Enzymes [BR:
psiu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.109 dolichyl-phosphate-mannose---protein mannosyltransferase
116755217 (POMT1)
Glycosyltransferases [BR:
psiu01003
]
O-Glycan biosynthesis
O-linked Man type
116755217 (POMT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMT
PMT_4TMC
MIR
Motif
Other DBs
NCBI-GeneID:
116755217
NCBI-ProteinID:
XP_032490168
Ensembl:
ENSPSNG00000011380
UniProt:
A0A8C9C430
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Position
6:complement(4974793..4991290)
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AA seq
725 aa
AA seq
DB search
MLGFLQRPVVVTADINLNVVALTAVGLLSRLWQLAYPRAVVFDEVYYGQYISFYMKRIFF
FDGSGPPFGHMLLALGGYLGGFDGNFLWNRIGAEYSTNVPVWSLRLLPALAGALSVPMAY
QIVWELGFSHCAAVGAALLILIENALITQSRLMLLESALIFFNLLAVLSYLKFSNSQKHG
PFSPSWWFWLVLTGVACACAVGIKYVGVFTYLLVLGVAAVHAWHLIGDQTLSNVRVLCHL
LARAVALLVIPVLVYLLFFYVHLLVLCRSGPHDQIMSSAFQASLEGGLARITQGQPLEVA
YGSQVTLKNAFGQPVPCWLHSHQSTYPVIYENGRGSSHQQQVTCYPFKDVNNWWIVKDPG
RHQLVVNNPPRPVRHGDVVQLVHGMTTRLLNTHDVAAPLSPHSQEVSCYIDYNVSMPAQN
LWRLDIVNRESDTDVWKTILSEVRFVHVNTSAILKLSGAPLPDWGFRQLEVVGEQLSRGY
HGSTVWSVEEHRYGRSQEQKERELELHSPTQTDVSRNLSFMARFSELQWRMLTVRSDDSE
HKYSSTPLDWVMLDTNIAYWLHPRTSAQIHLLGNIVIWASASLATLVYALLFIWYLFRRR
RRVCDLPEDCWLRWALAGALCAGGWAVNYVPFFMMEKTLFLYHYLPALTFQILLLPVVLE
HISDHLCRSQLQRSLFGALVVAWFASACHVSNTLRPLTYGDRSLSPSELKALRWKDSWDI
LIRKY
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgttgggatttttgcagcgccctgtggtggtgacagctgacatcaacttgaatgtcgta
gctctgaccgcggtggggttgctgagccgactatggcagcttgcctatccaagggccgtg
gtttttgatgaagtatattatgggcagtacatctctttttacatgaagcggatcttcttt
ttcgatggcagtggaccaccgtttggccacatgctgctggccttgggaggttatttagga
ggatttgatggtaactttttgtggaacagaattggagcagaatacagcaccaacgtgccc
gtgtggtccctgcgcctgctgccggcccttgcaggggccctgtcggtgcccatggcctac
cagatcgtgtgggagctcggcttctctcactgtgctgccgtgggggccgctcttctgatt
ctgatcgagaacgctctgatcactcagtcgaggctgatgcttttggaatcagccttgata
tttttcaacctgttggccgtgctgtcttacctgaagttctccaactcccagaaacacggg
cccttctctccgagctggtggttttggttggtactgacgggtgtggcctgcgcctgtgca
gtcggcatcaaatatgtgggtgtgttcacatacttactggtgcttggggttgccgctgtc
cacgcctggcacctgataggagaccagacgctgtcaaacgtccgtgtgctctgtcacctg
ctcgcccgagcggtggccctgttggtcatccccgtcctcgtgtacctgctgttcttctat
gtccacctgctggtgctctgccgctccgggccccacgaccaaatcatgtccagtgctttc
caggccagcttggaggggggactggcgcggatcacacaaggccagcccctggaggtggcc
tacggttcccaggtcactctgaagaacgcctttggccaacccgtgccctgctggcttcat
tcccaccagagcacctaccccgtgatatacgagaatggccgcggcagctcccaccagcag
caggtgacctgctaccccttcaaggatgtcaacaactggtggattgtaaaggaccccggg
aggcaccagctggtggtgaacaaccccccgaggcccgtgcggcacggcgacgtcgtgcag
ctggtgcacggcatgaccacccgcctcctcaacacgcacgacgtcgcggcccccctgagc
cctcactcccaggaggtgtcctgctacatcgactacaatgtctccatgcccgcccagaac
ctctggaggctggacatcgtgaacagggagtcggacacggacgtctggaagaccatcttg
tcagaggtccggtttgtgcatgtgaacacctcagccatcctcaagctgagcggggcgccc
ctcccggactggggctttcggcagctggaggtggtcggggagcagctgtcccggggctac
cacgggagcaccgtgtggagcgtggaggaacaccgctatggcaggagccaggagcagaag
gagagggaactggagctccactcccctacgcagacggacgtcagcagaaacctcagcttc
atggccagattctcggagctgcagtggcggatgctgacagtgagaagcgacgattccgaa
cataaatacagctccacgccgctggactgggtcatgctagacaccaacatcgcctactgg
ctgcaccccaggaccagcgcacagatccacctgctcggaaacatcgtgatctgggcctcg
gccagcctcgccaccctggtgtatgccctgctcttcatctggtacctgttcagacgccga
agaagagtctgcgacctccctgaggattgctggctgcgctgggcgctggccggggctctg
tgcgccgggggctgggccgtgaactacgtgcccttcttcatgatggagaagacgctgttc
ctctaccactacctgcccgcactcaccttccagatcctgctgcttcctgtggttttggag
cacatcagcgaccacctgtgcaggtcccagctccagaggagcctatttggcgcgctggtc
gtggcatggtttgcctctgcctgtcatgtgtccaacacgctgcgcccgctgacctacggg
gacaggtcactctcacccagcgaactcaaggcccttcgctggaaagacagctgggatatc
ctgatccggaagtactag
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