Phocoena sinus (vaquita): 116755221
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Entry
116755221 CDS
T07759
Symbol
RAPGEF1
Name
(RefSeq) rap guanine nucleotide exchange factor 1 isoform X1
KO
K06277
Rap guanine nucleotide exchange factor 1
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04015
Rap1 signaling pathway
psiu04510
Focal adhesion
psiu04722
Neurotrophin signaling pathway
psiu04910
Insulin signaling pathway
psiu05211
Renal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
116755221 (RAPGEF1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116755221 (RAPGEF1)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
116755221 (RAPGEF1)
09156 Nervous system
04722 Neurotrophin signaling pathway
116755221 (RAPGEF1)
09160 Human Diseases
09162 Cancer: specific types
05211 Renal cell carcinoma
116755221 (RAPGEF1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
116755221
NCBI-ProteinID:
XP_032490191
Ensembl:
ENSPSNG00000010810
LinkDB
All DBs
Position
6:4781205..4923083
Genome browser
AA seq
1094 aa
AA seq
DB search
MGNAIEKQKPLKRSHLCPWKQDSQRSHLSSFTMKLMDKFHSPKIKRTPSKKGKPAEVSVK
IPEKPVNKEATDRFLPEGYPIPLDLEQQAVEFMSTSAVASRSQRQKNLSWLEEKEKEVVS
ALRYFKTIVDKMAIDKKVLEMLPGSASKVLEAILPLVQSDPRIQHSSALSSCYSRVYQSL
ANLIRWSDQVMLEGVNSEDKEMVTTVKGVIKAVLDGVKELVRLTIEKQGHPSPTSPVKPS
SPACKPDGQSELPLTDREMEILNKTTGLSQSAEGLPDSTDEEVAPPKPPLPGIRVVDNSP
PPALPPKKRQSAPSPTRVAVVAPMSRATSGSSLPVGINRQDFDVDCYAQRRLSGGSHSYG
GESPRLSPCSSIGKLSKSDEQLSSLDRDSGRCSRNTSCETLDHYDPDYEFLQQDLSNADQ
IPQQVACNLSPLPESLGESGSPFLGHPFQLPLGSCPQPEGPSAPGQQVDVPPALPEKKRR
SAASQTADSSGCRASYERHPSQYDNISEEDLQNPASVQSVPFTPFAAVLPFQQGGSSASV
EFVGDFTVPESTGDPEKPPPLPEKKNKHMLAYMQLLEDYSEPQPSMFYRTPQKEHIYQQK
NKLLMEVYGFSDSFSAGDAPQELAPPPALPPKQRQLESPTSKDGHPRDASSAGSAPGKES
RDGGDRAPKSPDAPEAQSEEEVDELSLIDHNEIMARLTLKQEGDDGPDVRGGSGDILLVH
ATETDRKDLVLYCEAFLTTYRTFITPEELIKKLQYRYEKFSPFADTFKKRVSKNTFFVLV
RVVDELCLVELTEEILKLLMELVFRLVCNGELSLARVLRKNILDKVDQKKLLRCANSDQP
LAARGVAARPGTLHDFHSHEIAEQLTLLDAELFYKIEIPEVLLWAKEQNEEKSPNLTQFT
EHFNNMSYWVRSIIMLQEKAQDRERLLLKFIKIMKHLRKLNNFNSYLAILSALDSAPIRR
LEWQKQTSEGLAEYCTLIDSSSSFRAYRAALSEVEPPCIPYLGLILQDLTFVHLGNPDYI
DGKVNFSKRWQQFNILDSMRCFQQAHYDIRRNDDIINFFNDFSDHLAEEALWELSLKIKP
RNITRRKTDREEKT
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atgggcaatgctattgaaaaacagaagcccctgaaacgaagccatctgtgcccctggaaa
caagactctcagcgttctcatctctcctccttcaccatgaagctgatggacaaattccac
tcacccaaaatcaagagaacgccatcaaagaagggaaaaccagctgaggtgtctgtgaag
attccagagaagcctgtgaacaaagaggcaacagacagatttctaccagagggctaccct
atccccttggatctggagcagcaggcagtagaatttatgtccaccagtgctgtggcttcc
aggtctcaaaggcagaagaacctgagctggctggaagagaaagagaaggaggttgtcagt
gccttgcgctactttaagaccattgtggacaaaatggctattgataagaaggtactggag
atgcttccagggtctgccagcaaggtgctggaggccatcttacccctggtgcagagcgac
cctcgaattcagcacagctcagccctctcctcctgctatagccgagtgtaccaaagtctc
gccaacctcattcgttggtctgaccaagtgatgctagaaggtgtgaactcagaagataaa
gagatggtgacaactgtgaagggggtcatcaaagccgtgctggacggagtgaaggagctt
gtcagacttaccatcgagaagcaggggcatccgtctccaacaagcccagtgaaacccagt
tccccagcctgcaaacccgacggccagtctgagctccccttgacagatcgagagatggag
attctaaacaagacgaccggcctgtcgcagtcggccgaggggctcccagattccacggat
gaagaggtcgcgccccccaaaccccccttacctggcattcgtgtggttgataatagtcct
ccaccagcattgccaccgaagaagagacagtcggctccatcccctacccgagtggccgtc
gtggcccccatgagtcgagccaccagtggctccagtttgcctgttggaattaataggcag
gattttgacgtggactgttacgcacagagacgactgtcgggcggcagccactcttatggc
ggcgagtcgccccgcctgtccccctgcagcagcataggcaagctcagcaagtcggacgag
cagctgtcgtctctggacagggacagcgggcggtgctcccggaacacaagctgtgagact
ctagatcattacgaccctgactacgaattcctccagcaagacctctctaacgcagaccag
atacctcagcaagtggcctgtaacctcagcccgttgccagagtccttgggggagtctggg
tctccgtttctcggccatcctttccagttgcctctgggcagctgtccccagccagagggg
ccctcggccccagggcagcaggtggacgtgccgcccgctcttcccgagaagaagcgcagg
agcgcggcctcccagacggcggacagctctggctgcagggcatcctacgagcggcacccc
tcgcagtacgacaacatctccgaggaggacctgcagaacccggcctcggtccagtccgtc
cccttcacgccctttgctgctgttcttccctttcagcaaggaggttcctcagcctctgtt
gaatttgtgggtgatttcactgttcctgaatcaacaggtgacccagaaaaacctcctcct
ctaccagagaagaaaaacaaacacatgctggcctacatgcagctgctcgaggactactcg
gagccgcagccctccatgttctaccggacgccgcagaaggagcacatctaccagcagaag
aacaagctcctcatggaggtgtatggcttcagcgactctttcagcgccggggatgccccg
caggagctcgccccgccccccgccctgccccccaagcagcggcagctggaatcaccaact
tcgaaggacggacatcccagagatgcctcgtcggccggcagtgcacctgggaaggaaagc
agggacggcggggacagggccccaaagtcaccagatgctccagaggctcagtcggaggag
gaagtagacgagctgtccctcattgaccacaatgaaattatggcaaggctgacgctcaag
caagagggcgacgacggaccagacgtccggggaggatctggtgacatcctactggtccac
gctactgagacggacaggaaagatctggtgttgtactgcgaggccttcttgaccacctac
aggaccttcatcacccctgaggagctcatcaagaagctgcagtacaggtacgagaagttt
tctccttttgccgacacgttcaagaagcgcgtcagtaagaacacgttcttcgtgctggta
cgggtggtggacgagctctgcctagtggagttgacggaagagatcttgaagctgctgatg
gagctggtctttcgcctggtgtgcaacggggagctcagtctggcccgtgtgctccggaag
aacatcctggacaaggtggaccagaagaagctgctcaggtgtgccaactccgaccagccc
ctggcggccaggggcgtagcagccaggcccgggaccttgcatgactttcacagccacgag
atagctgagcagctgacactgctggatgccgagctcttttataagatagagattcctgag
gttttgctttgggcaaaagagcagaacgaggagaagagccccaacttgacccagttcacg
gagcacttcaacaacatgtcctactgggttcggtcgatcatcatgttacaggaaaaggcc
caagacagggaacggctgctcttgaagttcatcaagatcatgaagcacttacggaagctg
aacaacttcaactcctacctggccatcctctcagcgctggactcggcccctatccgcagg
ctggagtggcagaagcagacctcagagggcctggcggagtactgcacgctgattgacagc
tcctcctccttccgcgcctaccgggccgccctctcggaggtggagccgccgtgcatccca
tacctggggctcatcctgcaggacctcaccttcgttcacctaggaaacccagactatatt
gacgggaaggtgaatttctccaaacggtggcaacagttcaacatcctggacagcatgcgg
tgcttccagcaggcgcattatgacatccggagaaacgatgacatcataaacttcttcaac
gacttcagtgaccacctggcggaggaggcgctatgggaactctctctgaaaatcaaaccc
aggaacataacacggaggaaaacagaccgggaagagaagacctag
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