Phocoena sinus (vaquita): 116755230
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Entry
116755230 CDS
T07759
Symbol
UBAP1
Name
(RefSeq) ubiquitin-associated protein 1 isoform X1
KO
K24629
ubiquitin-associated protein 1
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psiu04131
]
116755230 (UBAP1)
Membrane trafficking [BR:
psiu04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
116755230 (UBAP1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_9
UBAP-1_UBA2
UBA_7
UBA
MerR-DNA-bind
YbeY
DUF2203
Motif
Other DBs
NCBI-GeneID:
116755230
NCBI-ProteinID:
XP_032490230
Ensembl:
ENSPSNG00000003078
LinkDB
All DBs
Position
6:81605556..81658995
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AA seq
518 aa
AA seq
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MLYPRCKIIPKQIISSLLIFCTLFLIVGTFSYLDDVPFKIGDKFKTPAKVGLPIGFSLPD
CLQVVREVQYDFSLEKKTIEWAEDIKKIQEAQWEAERKAEEAEAKVNSKSGPEGDSKMSF
SKTHGTATMPPPINPILASLQHNSILTPTRVSSSATKQKVLSPPHTKADFNPADFECEED
PFDNLELKTIDEKEELRNILVGTSGPIMAQLLDSNLPRGGSGSVLQDEEVLASLERATLD
FKPLHKPNGFITLPQLGNCEKMSLSSKVSLPPIPAVSNIKSLSFPKLDSDDSSQKTAKMA
STFHSTSCLRSGTFWNSLKPSTQSSASELNGHHALGLSALNLDSGTEVPTLTHSQMPSLS
VLSVCTEESSPPNTCPTVTPPNLSMSQVPNTPSCPQAYSELQTLSPSERHCVETVVSMGY
SYECVLKAMKKKGENIEQILDYLFAHGQLCEKGFDPLLVEEALEMQQCSEEKMMEFLQLM
SKFKEMGFELKDIKEVLLLHNNDQDNALEDLMARAGAS
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgttgtatcctagatgtaagattataccaaaacaaataataagttctttgctgatattt
tgtactttatttttgattgtagggactttcagttaccttgatgatgtcccatttaagata
ggagacaaattcaaaacaccagctaaagttggtctacctattggcttctccttgcctgat
tgtttgcaggttgtcagagaagtacagtatgacttctctttggaaaagaaaaccattgag
tgggctgaagatattaagaaaatccaagaagcccagtgggaagcagagcgcaaggctgag
gaagcagaagctaaggtgaattctaagagtggcccagagggtgacagcaaaatgagcttc
tccaagactcacggtacagccacaatgccacctcctatcaatcccatccttgccagctta
cagcacaacagcatcctcaccccgactcgggtcagcagcagtgccacaaaacagaaagtt
ctcagcccaccccacacaaaggcagatttcaatcctgctgactttgagtgtgaagaagac
ccatttgataatctggagttaaaaactattgatgagaaggaagagctgagaaacattctg
gtaggaaccagtggacccattatggcccagttattggacagtaacttgcctagaggtggc
tctgggtccgtgttacaggatgaggaggtcctggcatccctggagcgggcaaccctagat
ttcaagcctcttcacaaacccaatggctttataaccttaccacagttgggcaactgtgaa
aagatgtcgctgtcttccaaagtgtccctccccccgatccctgcagtaagcaatatcaag
tccctgtccttccccaaacttgactctgatgacagcagtcagaagacagccaagatggca
agcactttccatagcacatcctgcctccgcagtggcacgttctggaattccctaaagcct
tccacccaaagcagtgccagtgagctcaatgggcatcatgctcttgggctttcagctttg
aacttggacagtggcacagaggtgccaaccctcacccattcccagatgccttccctctct
gttttgtctgtgtgcacagaagaatcatcacctccaaatacctgtcccacggtcacacct
cctaatctctcaatgtcacaagtgcccaacactcccagctgtccccaggcttactctgaa
ctgcagacgctgtcccccagtgagcggcattgtgtggagacggtggtcagcatgggctac
tcatatgagtgtgtcttgaaagccatgaagaagaaaggagagaatattgagcagattctc
gactatctctttgcacatggacagctctgtgagaagggctttgaccctcttttagtggaa
gaggctctggaaatgcagcagtgttcagaggaaaagatgatggagtttcttcagttaatg
agcaaatttaaggaaatgggctttgaactgaaagatattaaggaagttctgctattacac
aacaatgaccaggacaatgctttggaagacctcatggctcgggcgggagccagctga
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