KEGG   Phocoena sinus (vaquita): 116755262
Entry
116755262         CDS       T07759                                 
Symbol
APTX
Name
(RefSeq) aprataxin isoform X1
  KO
K10863  aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
Organism
psiu  Phocoena sinus (vaquita)
Pathway
psiu03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:psiu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    116755262 (APTX)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:psiu03400]
    116755262 (APTX)
Enzymes [BR:psiu01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.1  In phosphorus-containing anhydrides
    3.6.1.70  guanosine-5'-diphospho-5'-[DNA] diphosphatase
     116755262 (APTX)
    3.6.1.71  adenosine-5'-diphospho-5'-[DNA] diphosphatase
     116755262 (APTX)
    3.6.1.72  DNA-3'-diphospho-5'-guanosine diphosphatase
     116755262 (APTX)
DNA repair and recombination proteins [BR:psiu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     116755262 (APTX)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     116755262 (APTX)
SSDB
Motif
Pfam: DcpS_C FHA_2 zf-C2HE HIT FHA FtsK_SpoIIIE_N Glycoamylase MARCKS
Other DBs
NCBI-GeneID: 116755262
NCBI-ProteinID: XP_032490327
Ensembl: ENSPSNG00000002301
UniProt: A0A8C9B7C8
LinkDB
Position
6:complement(80765958..80848890)
AA seq 366 aa
MQTGDSGSTKQGYNFYVELMWSRLMMRVCWLVRQDNRHQRIKLPHLEAVMVGRSPETKIT
DKKCSRQQVQLKAECNKGYVKVKQVGVNPTSIDSLIIGKDQEVKLQPGQVLHLVNELYPY
IIEFEEETKNPGLETHRKRKRSGNSDSVERDAAQEAEPSTRLEPGSNPSQCSVPPKKEKD
ASTKKESLGHWSQGLKISMEDPKMQVYKDEQVVVIKDKYPKARHHWLVLPWASISSLKAV
TGEHLELLRHMHTVGEKVIADFAGSSKLRFRLGYHAIPSMSHVHLHVISQDFDSPCLKNK
KHWNSFNTEYFLESQAVIEMVQEAGRVTVQDGMCELLKLPLHCHECQQLLPSIPQLKVHL
RKHWPK
NT seq 1101 nt   +upstreamnt  +downstreamnt
atgcagaccggtgatagcggttcaacaaagcaaggatataatttctatgtggaattaatg
tggtccagactaatgatgcgggtgtgctggttggtgagacaggacaatcggcaccagcga
atcaaacttccacatttggaagcagtcatggttgggcgcagccccgagaccaagatcact
gacaagaaatgttctcgacagcaagtacagttgaaagcggagtgtaacaaaggatatgtc
aaggtaaagcaggtaggggtcaatcccaccagcatcgactcactcataattgggaaagac
caagaggtgaagctgcagcctggccaggtcctccacctggtgaatgaactttatccatat
atcatagagtttgaggaagagacaaagaaccctggcctggaaacacacaggaagagaaag
aggtcaggcaacagtgattctgtagaaagggatgctgcccaggaagctgagcccagtaca
agactagaacctggaagcaaccctagccagtgctctgtgcccccaaagaaggagaaagat
gcatccaccaaaaaggaatcattgggccactggagtcaaggcttgaagatttcaatggag
gaccccaaaatgcaggtttacaaagatgagcaggtggtggtgattaaggataaatacccc
aaggctcgtcaccactggctggtcttaccatgggcctccatttccagtctgaaggctgtg
accggagaacaccttgagctcctcagacacatgcacactgtgggggaaaaagtgattgca
gacttcgctgggtctagcaaactccgcttccgattgggctaccatgccattcccagcatg
agccatgtacaccttcatgtgatcagccaggattttgattctccttgccttaaaaacaaa
aaacactggaattctttcaataccgaatacttcctcgaatcacaagctgtgattgagatg
gtacaagaggctggcagagtgactgtccaagatgggatgtgtgagctcttgaagctgccc
ctccattgtcatgagtgccagcagctgctgccttccattcctcagctgaaagtgcatctc
aggaagcactggccaaagtga

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