Phocoena sinus (vaquita): 116755277
Help
Entry
116755277 CDS
T07759
Symbol
GAPVD1
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psiu04131
]
116755277 (GAPVD1)
Membrane trafficking [BR:
psiu04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
116755277 (GAPVD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
DUF5740
Motif
Other DBs
NCBI-GeneID:
116755277
NCBI-ProteinID:
XP_032490372
Ensembl:
ENSPSNG00000014354
LinkDB
All DBs
Position
6:complement(10123245..10194149)
Genome browser
AA seq
1460 aa
AA seq
DB search
MVKLDIHTLAHHLKQERLYVNSEKQLIQRLNADVLKTAEKLYRTAWIAKQQRINLDRLII
TSAEASPAECCQHAKILEDTQFVDGYKQLGFQETAYGEFLSRLRENPRLIASSLVAGEKL
NQENTQSVIYTVFTSLYGNCIMQEDESYLLQVLRYLIEFELKESDNPRRLLRRGTCAFSI
LFKLFSEGLFSAKLFLTATLHEPIMQLLVEDEDHLETDPNKLIERFSPSQQEKLFGEKGS
DRFRQKVQEMVDSNEAKLVALVNKFIGYLKQNTYCFPHSLRWIVSQMYKTLSCVDRLEVG
EVRAMCTDLLLACFICPAVVNPEQYGIISDAPINEVARFNLMQVGRLLQQLAMTGSEEGD
PRTKSSLGKFDKSCVAAFLDVVIGGRAVETPPMSSVNLLEGLSRTVVYITYSQLITLVNF
MKSVMSGDQLREDRMALDNLLANLPQAKPGKSSSLEMTPYSTPQLSPATTPANKKNRLPI
ATRSRSRTNVLMDLHMDHEGSAQETIQEVQPEEVLVISLGTGPQLTPGMMSENEVLNMQL
SDGGQGDVPVDENKLHGKPDKTLRFSLCSDNLEGISEGPSNRSNSVSSLDLEGESVSELG
AGPSGSNGVEALQLLEHEQATTQDNLDDKLRKFEIRDMMGLTDDRDISETVSETWSTDVL
GSDFDPNIDEDRLQEIAGAAAENMLGSLLCLPGSGSVLLDPCTGSTISETTSEAWSVEVL
PSDSEAPDLKQEERLQELESCSGLGSTSDDTDVREVSSRPSTPGLSVVSGISATSEDIPN
KIEDLRSECSSDFGGKDSVTSPDMDEVTHGAHQLTSPPSQSESLLAMFDPLSSHEGASAV
VRPKVHYARPSHPPPDPPILEGAAGGNEARLPNFGSHVLTPAEMEAFKQRHSYPERLVRS
RSSDIVSSVRRPMSDPSWNRRPGNEERELPQAAAIGATSLVAAPHSSSSSPSKDSSRGET
EERKDSDDEKSDRNRPWWRKRFVSAMPKAPIPFRKKEKQEKDKDDLGPDRFSTLTDDPSP
RLSAQTQVAEDILDKYRNAIKRTSPSEGALANYESAEVMGDGESAHDSPRDETLQNISAD
DLPDSASQAAHPQDSAFSYRDAKKKLRLALCSADSVAFPVLTHSTRNGLPDHTDPEDNEI
VCFLKVQIAEAINLQDKNLMAQLQETMRCVCRFDNRTCRKLLASIAEDYRKRAPYIAYLT
RCRQGLQTTQAHLERLLQRVLRDKEVANRYFTTVCVRLLLESKEKKIREFIQDFQKLTAA
DDKTAQVEDFLQFLYGAMAQDVIWQNASEEQLQDAQLAIERSVMNRIFKLAFYPNQDGDI
LRDQVLHEHIQRLSKVVTANHRALQIPEVYLREAPWPSAQSEIRTISAYKTPRDKVQCIL
RMCSTIMNLLSLANEDSVPGADDFVPVLVFVLIKANPPCLLSTVQYISSFYASCLSGEES
YWWMQFTAAVEFIKTIDDRK
NT seq
4383 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagctagatattcatactctggcccatcacctcaagcaggaacgcttgtatgta
aactctgagaaacagctcattcagaggctcaatgcagatgtacttaagacagctgaaaag
ttgtatcgtacagcatggatcgctaagcagcagagaattaatttggatcggcttattata
accagtgctgaagcttcccctgctgaatgttgccaacatgccaagattttggaagataca
cagtttgttgatgggtataagcagttgggatttcaggagactgcttatggagaattctta
agtcgattaagggaaaatcctcgtcttattgcctcctctttggttgccggagagaaactt
aatcaggagaacacacaaagtgttatttacacagtttttacctctctctatggcaactgc
attatgcaagaagatgaaagctacctccttcaggtgttgagatacttgattgaatttgaa
cttaaagaaagtgacaaccccaggcgacttttgaggagaggaacttgtgccttcagcatc
ttatttaaacttttttctgaaggactgttttctgccaaacttttcctcacagcaacttta
catgagccaatcatgcagctgcttgttgaagatgaggatcacctggaaacagacccaaac
aagctaattgagaggttctccccgtctcaacaggaaaagctctttggagagaaaggctca
gatagattcaggcaaaaggttcaagagatggtggattcgaacgaggccaaactagtggct
ttggtgaacaaatttattggttatctcaaacagaacacatactgctttccacatagtttg
agatggattgtgtcacagatgtacaaaactctctcctgtgtagatagactggaagttggg
gaggtcagagcaatgtgtactgacctcctgttggcctgcttcatttgtcctgctgttgtc
aatccagaacagtatggaataatttctgatgctccaattaatgaggtggcaagatttaat
ctgatgcaggttggccgccttttgcagcaattagcaatgactggctccgaagagggagat
ccccggacaaagagcagccttggaaaatttgacaaaagctgtgttgctgctttccttgat
gtggtgattggaggccgtgcagtggagaccccgcctatgtcctctgttaatcttctggaa
gggttgagcagaactgtagtttatataacctacagtcagcttattactctggtgaatttt
atgaagagtgtgatgtctggagatcaactgagagaagatagaatggctcttgacaattta
ttggcaaacctaccccaggcaaagccaggaaaaagcagcagtttggaaatgactccctac
agtactcctcagctgtctccagcaaccactccagcaaataaaaagaatcgattgcctata
gcaactcggagcagaagccgcaccaatgttctgatggacttacatatggaccatgaagga
tcagctcaagaaaccatccaggaagtgcagccagaagaggtgttggtcatttccttagga
acaggtccccagcttactccagggatgatgtcagaaaatgaggtcctaaacatgcagctt
tcggatggaggacaaggagatgtccctgtcgatgaaaacaaactccacggtaaacctgat
aaaaccttgcgcttttccctctgcagtgataatctggaaggaatatctgaaggtccttca
aatcgttctaattcagtatcctcactagacctggaaggggaatctgtatcagaacttgga
gcaggaccttctgggagtaatggagttgaagctctacagctgttagagcatgagcaagct
acaacccaggataatctcgatgataagctaaggaagtttgaaattcgtgacatgatggga
ctgacagatgatagggatatatcagaaacagtgagtgagacgtggagtacagatgtcttg
ggaagtgattttgaccctaacattgatgaagatcgcttgcaagaaatcgcaggtgcagca
gcagagaacatgttaggcagtttactgtgcctgccaggttcagggtcagtgcttcttgac
ccctgcactggttctaccatatcagagacaacaagcgaagcttggagtgtagaggtattg
ccaagtgactcagaggccccagatctaaagcaggaggagcgactgcaagaactggagagc
tgttcaggactgggtagcacatctgatgatacggatgtcagggaggtcagttcccgcccc
agcacaccaggcctcagtgttgtgtcgggcataagtgcaacctctgaagatattcccaat
aaaattgaagacctgagatctgagtgcagctctgattttgggggtaaagattctgtcact
agtccagacatggatgaagtaactcatggtgcccaccagctgacctctcctccttctcag
tcagagtctctccttgccatgtttgatccactgtcttcacatgaaggggcttctgctgta
gtaaggccaaaggttcactatgccaggccatcgcatccaccaccagatcccccaatcctg
gaaggagctgcaggaggaaacgaggccaggttgccaaacttcggttcccatgtcttaact
ccagctgagatggaggcatttaagcaaaggcattcttaccctgagagattagttcgcagc
aggagctctgatatagtgtcttctgtccggcgacctatgagtgaccccagctggaaccga
cgtccagggaatgaagagcgagaactcccccaagccgcagccattggtgctacttctttg
gtggctgcacctcattcatcatcttcatccccgagtaaggactcctcaagaggagagact
gaagaacgcaaagatagcgatgatgagaaatcagacaggaacagaccttggtggagaaag
cgttttgtttctgccatgcccaaagctcctataccatttagaaagaaagaaaaacaagaa
aaagacaaagatgatctggggcctgacagattctcaacactcacagatgacccgagccct
agactcagtgcacaaactcaggttgctgaggatattctggacaaatacaggaatgccatt
aaacgaaccagtcccagtgaaggagcactggcaaactacgaaagtgcagaagttatgggt
gatggtgaaagtgcgcacgattcgcctcgtgacgaaaccctgcaaaacatctcagctgat
gatctcccagattccgcgagccaagccgctcaccctcaggattcagctttctcttacaga
gatgcaaaaaagaaactgaggctcgctctttgttctgcggattctgttgctttcccagtg
ctaacccattcaacaaggaatggtttaccagaccatacagacccagaagacaatgaaatt
gtctgcttcctaaaagttcaaatagctgaagcaattaatttacaagataaaaacttaatg
gctcaacttcaagaaacaatgcgttgtgtgtgccgctttgataacaggacttgtaggaaa
ctactggcttctatcgctgaggactataggaaaagggccccctatattgcttacctcact
cgttgtcgacaaggactgcagaccacgcaggctcacctggaaaggctactgcaaagggtt
ttgcgggacaaagaggtggccaatcgatacttcaccactgtctgtgtgaggttgctgctt
gagagcaaagaaaagaagatcagggaattcattcaagactttcagaaactcacggcagct
gatgataaaactgctcaggtggaagattttctgcagttcctttatggcgccatggcccag
gatgtcatatggcagaatgcgagtgaggagcagcttcaggatgcccagctcgccattgag
cgaagtgtgatgaatcggatcttcaaacttgccttctaccctaatcaggacggggacata
ctccgtgaccaagttcttcatgaacatattcagagattgtctaaagtagtgactgcaaat
cacagagctcttcagataccagaggtttatcttcgggaggcaccgtggccatctgcacag
tcagaaatcaggacaataagtgcttacaagacgccccgggacaaagtgcagtgcatcctg
agaatgtgctccacgatcatgaacctcctgagcctggccaacgaggactccgtcccagga
gcagatgacttcgtccctgttttggtttttgtgttgataaaggcaaatccaccctgtttg
ctgtccactgttcagtacatcagtagcttttatgccagctgtctgtctggagaggagtct
tattggtggatgcagttcacagcagcagtggaattcattaagactatcgatgaccgaaag
taa
DBGET
integrated database retrieval system
