Phocoena sinus (vaquita): 116755389
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Entry
116755389 CDS
T07759
Symbol
ABCA2
Name
(RefSeq) ATP-binding cassette sub-family A member 2 isoform X1
KO
K05642
ATP-binding cassette, subfamily A (ABC1), member 2
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu02010
ABC transporters
psiu04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
116755389 (ABCA2)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
116755389 (ABCA2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psiu02000
]
116755389 (ABCA2)
Transporters [BR:
psiu02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
116755389 (ABCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
Motif
Other DBs
NCBI-GeneID:
116755389
NCBI-ProteinID:
XP_032490692
LinkDB
All DBs
Position
6:814727..834966
Genome browser
AA seq
2440 aa
AA seq
DB search
MGFLHQLQLLLWKNVTLKRRSPWVLAFEIFIPLVLFFILLGLRQKKPTISVKEVSFYTAA
PLTSAGILPVMQSLCPDGQRDEFGFLQYANSTVTQLLERLNRVVEEGNLFDPARPSLGSE
LEALRQHLEALRSGPDTWESHLDRPAVSSFSLDSVVRDPRELWRFLTQNLSLPDGTAQAL
LAAQVDLPEVYRLLFGSSPALDAGSGIPRDPEPWSRRGSNPLFRMEELLLTPALLEQLTC
TPGSRELGRILTVPQGQETALQGYRDAICRGQAAVRAQRFSGLAAELRNQLDVAKIAQQL
GLDAPNGSAPQPQPQPAPPRRLQALLEDLLDAQKVLQDVDVLSALALLLPQGACTGRPPG
PPANGPGGAANGTGAGAGVGSNTTSEEGAPSAAAPASSSDVLQGQCSAFVQLWAGLQPIL
CGNNRTIEPEALRRGNMSSLGFTSKEQRNLGLLVHLMTSNPKVLYAPAGSEADRVILKAN
ETFALVGNVTHYAQVWLNISAEIRSYLEQGRLQQHLRWLQQYVAELRLHPEALSLSPEEL
PPALRQDNFSLPNGSVLLQQLDTIDNAACGWIQFMSKVSVDIFKGFPDEESIVNYTLNQA
YQDNVTVFASVIFQTRKDGSLPPHVHYKIRQNSSFTEKTNEIRRAYWRPGPNTGGRFYFL
YGFVWIQDMMERAIIDTFVGHDVVEPGNYVQMFPYPCYTRDDFLFVIEHMMPLCMVISWV
YSVAMTIQHIVAEKEHRLKEVMKTMGLNNAVHWVAWFITGFVQLSISVTALTAILKYGQV
LMHSHVVIIWLFLAVYAVATVMFCFLVSVLYSKAKLASACGGIIYFLSYVPYMYVAIREE
VAHDKITAFEKCIASLMSTTAFGLGSKYFALYEVAGVGIQWHTFSQSPVEGDDFNLLLAV
TMLMADAVVYGVLTWYIEAVHPGMYGLPRPWYFPLQKSYWLGSGRTEAWEWSWPWARAPR
LSVMEEDQACAMESRRLEETRGMEEEPTHLPLVVCVDKLTKVYKNDKKLALNRLSLNLYE
NQVVSFLGHNGAGKTTTMSILTGLFPPTSGSATIYGHDIRTEMDEIRKNLGMCPQHNVLF
DRLTVEEHLWFYSRLKSMAQEEIRKEMDKMIEDLELSNKRHSLVQTLSGGMKRKLSVAIA
FVGGSRAIILDEPTAGVDPYARRAIWDLILKYKPGRTILLSTHHMDEADLLGDRIAIISH
GKLKCCGSPLFLKGAYGDGYRLTLVKRPAEPGDPQEPGQTASPPGRAQLSSCSEPQVSQF
IRKHVASCLLVSDTSTELSYILPSEAAKKGAFERLFQHLERSLDALHLSSFGLMDTTLEE
VFLKVSEEDQSLENSEADVKESRKDVLPGAVDSLSREGHAGNLARCAELAQSQVSLQSAS
SVGSARGDEGAGYTDVCGDYRPLCENLQDPDNVSLQEAEAETLLRVGQGSRKLEGWWLKV
RQFHGLLVKRFHCARRNSKALSSQILLPAFFVCVAMTVALSVPEIGDLPPLVLSPSQYHN
YTQPRGNFIPYANEERREYRLRLSPDAGPQQLVSTFRLPSGVGATCVLKSPANGSLGPTL
NLSSGESRLLATRFFDSMCLESFTQGLPLSNFVPPPPSPAPSDSPVSLDEDPPQAWNTSL
PPTSSPENWTSAPSLPRLVREPVRCTCSGQGTGFSCPGSVGGHPPQMRVVTGDILTDITG
HNVSEYLLFTSDRFRLHRYGAITFGNVQKSIPASFGARAPAMVRRIAVRRAAQVFYNNKG
YHSMPTYLNSLNNAILRANLPKSKGSPAAYGITVTNHPMNKTSASLSLDYLLQGTDVVIA
IFIIVAMSFVPASFVVFLVAEKSTKAKHLQFVSGCNPVIYWLANYVWDMLNYLVPATCCV
IILFVFDLPAYTSPTNFPAVLSLFLLYGWSITPVMYPASFWFEVPSSAYVFLIVINLFIG
ITATVATFLLQLFEHDKDLKVVNSYLKSCFLIFPNYNLGHGLMEMAYNEYINEYYAKIGQ
FDKMKSPFEWDIVTRGLVAMTVEGFVGFLLTIMCQYNFLRQPQRMPVSTKPVEDDVDVAS
ERQRVLRGDADNDMVKIENLTKVYKSRKIGRILAVDRLCLGVRPGECFGLLGVNGAGKTS
TFKMLTGDESTTGGEAFVNGHSVLKELLQVQQSLGYCPQFDALFDELTAREHLQLYTRLR
GIPWKDEARVVKWALEKLELTKYADKPAGTYSGGNKRKLSTAIALIGYPAFIFLDEPTTG
MDPKARRFLWNLILDLIKTGRSVVLTSHSMEECEALCTRLAIMVNGRLRCLGSIQHLKNR
FGDGYMITVRTKGSQNVKDVVRFFSRNFPEAVLKERHHTKVQYQLKSEHISLAQVFSKME
QVVGVLGLEDYSVSQTTLDNVFVNFAKKQSDNLEPQETEPPSALRSPLGRLLSFFRPRPP
TTELRALVADEPEDLDTEDEGLVSFEEERAQLSFNTDTLC
NT seq
7323 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcctgcaccagctgcagctgctgctctggaagaacgtgacgctgaagcgccgg
agcccgtgggtcctggccttcgagattttcatccctctcgtcctcttcttcatcctgctg
gggcttcggcagaagaagccaaccatctctgtgaaggaagtctccttctacacggcagcc
cccctcacctctgccggcatcctgcccgtcatgcagtcgctgtgcccggatggccagcgg
gacgagtttggcttccttcagtacgccaactccacggtcacgcagctgttggagcgtctc
aaccgcgtggtggaggagggcaacctgtttgaccccgcgaggcccagcctgggctcggag
ctcgaggcgctgcgccagcacctggaggccctcagatccggcccggacacctgggagagc
caccttgaccgacctgcagtgtcctccttctctctggactcggtggtcagggacccacgg
gagctctggcgtttcctgactcagaacctgtcgctgcctgatggcacagcccaggctctc
ctggccgcccaggtggacctgcctgaggtgtatcgcctgctttttggctcttcacctgcc
ctggatgcggggtcaggcatccccagggatccggagccctggagccgccggggcagcaat
cctctattccggatggaggagctgctgttgacccctgccctcctggagcagctcacctgc
acgccaggctccagggagttgggccggatcctcacggtgccccagggtcaggagacagcg
ctgcagggctaccgggacgccatctgcaggggtcaggctgcagtgcgtgcccagcgcttt
tctgggctggccgctgagctccggaaccaactggatgtggccaagatcgcccagcagctg
ggcctggatgcccccaacggctccgccccgcagccgcagccgcagccagcccctccccgg
cggctgcaggcgctgctggaagacctgttggacgcccaaaaggttctgcaggatgtggat
gtcctctcggccctggccctgctgctgcctcagggtgcctgcacgggccggcctcctggg
cccccagccaacggccctggcggggcggccaacggcaccggggctggggcaggcgtgggc
tctaacaccacatccgaggagggtgccccgtccgctgcagccccggcctcctcctcggac
gtgctgcagggccagtgctcagcctttgtgcagctctgggcaggcctgcagcccatcctg
tgtggcaacaaccgcaccatcgagcccgaggcacttcggaggggcaacatgagctccctg
ggcttcacgagcaaggagcagcggaacctgggcctcctcgtgcacctcatgaccagcaac
cccaaggtcctgtacgcgccggcgggctccgaggcggatcgcgtcatcctcaaggccaac
gagaccttcgcccttgtaggcaacgtgactcactacgcccaggtctggctcaacatctca
gctgagatccgcagctacctggagcagggccggctgcagcaacacctgcgctggctgcag
cagtatgtggcagagctgcggctgcacccggaggcactgagcctgtcgccagaggagctg
ccgcctgccctgcgccaggacaacttctccctgcccaatggctcggtcctcctgcagcag
ctggacaccatcgacaacgcggcctgcggctggatccagttcatgtccaaggtgagcgtg
gacatcttcaagggttttcccgacgaggagagcatcgtcaactacaccctcaaccaggct
taccaggacaacgtcaccgtgtttgccagcgtgatcttccagacccgcaaggacggctcc
ctgccaccccacgtgcactacaagatccgccagaactccagcttcactgagaaaaccaat
gagatccgcagggcctactggcggccggggcccaacaccggcggccgcttctacttcctg
tatggcttcgtctggatccaggacatgatggagcgtgccatcatcgacaccttcgtgggc
cacgacgtggtggagccaggcaactacgtgcagatgttcccctacccctgctacacacgg
gacgactttctgttcgtcatcgagcacatgatgccgctctgcatggtgatttcctgggtc
tactctgtggccatgaccatccagcacattgtggccgagaaggagcatcggctgaaggag
gtgatgaagaccatgggcctgaacaatgccgtgcactgggtggcctggttcatcacgggc
tttgtgcagctctccatctcggtgacggcgctgaccgccatcctcaagtacggccaggtg
ctcatgcacagccacgtagtcatcatctggctctttctggccgtctacgccgtggccacc
gtcatgttctgtttcctggtgtccgtgctgtactccaaggccaagctggcctcggcctgc
ggtggcatcatctacttcctgagctacgtgccctacatgtacgtggcgatccgtgaggag
gtggcccacgacaagatcaccgccttcgagaagtgcatcgcgtccctgatgtccacgaca
gcctttggcctgggctccaagtacttcgccctgtacgaggtggcgggcgtgggcatccag
tggcacacgttcagccagtcgcccgtggaaggggacgacttcaacctgctcttggctgtc
accatgttgatggcagacgcagtcgtctacggtgtgctcacgtggtacatcgaggccgtg
cacccaggcatgtacgggctgccccggccctggtacttcccactgcagaagtcctactgg
ctgggcagcgggcggacggaagcgtgggagtggagctggccgtgggctcgcgcgccccgc
ctcagcgtcatggaggaggaccaggcctgtgccatggagagccggcgcctggaggagacg
cggggcatggaagaggagcccacccacctgccgctggtggtctgcgtggacaagctcacc
aaggtctacaagaacgacaagaagctggccttgaacaggctgagcctaaacctctatgag
aaccaggtggtgtccttcctgggccacaacggggctggcaagaccactaccatgtctatc
ctcaccggcctgttcccaccgacatcgggttcggccaccatctacgggcacgacattcgc
acggagatggacgagatccgcaagaacctgggcatgtgcccccagcacaacgtgctcttc
gaccggcttacggtggaggagcacctctggttctactcgaggctcaagagcatggcccag
gaggagatccgcaaggagatggacaagatgatcgaggacctggagctctccaacaagcgg
cactcgctggtgcagacactgtccggcggcatgaaacgcaagctctccgtggccatcgcc
tttgtgggcggctcccgtgccatcatcctggatgagcctacggccggcgtggacccctac
gcacgccgcgccatctgggacctcatcctgaagtacaagccaggccgcaccatcctcctg
tccacccaccacatggacgaggccgacctgcttggggatcgcattgccatcatctcccac
gggaagctcaagtgctgtggctccccgctgtttctcaagggtgcttacggggatggctac
cgcctcacgctggtcaagcggcctgccgagcccggggacccccaagagccagggcagaca
gccagccccccaggtcgggcccagctgagcagctgctccgagccccaggtttcccagttc
atccgcaaacatgtggcctcctgcctgctggtctcggacaccagcaccgagctctcttac
atcctgcccagcgaggccgccaagaagggagcctttgagcgcctctttcagcacctggag
cgcagtctggatgccctgcacctgagcagctttgggctgatggacacgacactggaggag
gtgttccttaaggtatcggaggaggaccagtcgctggagaacagcgaggcagacgtgaaa
gagtccaggaaagatgtgctgcctggggccgtggactcattgtcgagggagggtcacgct
ggcaacctggcccggtgcgcagagctggcacagtcacaggtgtcgctgcagtctgcgtcc
tcggtgggctctgcccgtggtgacgagggggccggctacaccgatgtctgtggcgactac
cgccccctctgtgagaacttgcaggaccctgacaacgtcagcttgcaagaggccgaggcg
gagaccctcttgcgggtcggccagggcagccgcaagctggagggctggtggctgaaggtg
cgccagttccacgggctcctggtgaagcgcttccactgtgcccgccgcaactccaaggcg
ctgtcctctcagatcctgctacctgccttcttcgtctgcgtggctatgacggtggcactc
tccgtcccggagatcggcgacctgcccccgctggtcctgtctccctcccagtaccacaac
tatacccagccccgcggcaacttcatcccctatgccaacgaggagcgccgggagtaccga
ttgcggctgtcccccgacgccggaccccagcagctggtgagcactttccggctgccgtca
ggcgtgggcgccacgtgtgtgctcaagtctccggctaacggctcgctggggcccacgctg
aacctgagcagtggtgagtcgcgcctgctggccacgcggttcttcgacagcatgtgcctc
gagtccttcacgcaggggctgccgctgtccaacttcgtgccgcccccaccctcgcctgcc
ccatctgactcccccgtgtccctggacgaggacccgccgcaggcctggaacacctccctg
ccgcccacctcctcgccagagaactggacgtcggcaccctccctgccacgcctggtgcgg
gagcccgtccgctgcacctgctccgggcagggcaccggcttctcctgtcccggcagtgtg
ggcgggcacccgccccagatgcgggtggtcacgggtgacatcctgaccgacatcaccggc
cacaatgtctctgagtacctgctgtttacctccgaccgcttccggctgcaccggtacggg
gccatcaccttcggcaacgtccagaagtccatcccagcctcgtttggcgcccgggccccc
gccatggtgcggaggatcgcggtgcggcgggcagcccaggttttctacaacaacaagggc
taccacagcatgcccacctacctcaacagcctcaacaatgccatcctgcgtgccaacttg
cccaagagcaagggcagccctgcggcctatggcatcaccgtcaccaaccaccccatgaac
aagacgagcgctagcctctccctggattacctgctgcagggcacggatgtggtcatcgcc
atcttcatcatcgtggccatgtccttcgtgccggccagcttcgtggtctttctggtggct
gagaagtccaccaaggccaagcacctgcagtttgtcagcggctgcaaccctgtcatctac
tggctggctaactacgtgtgggacatgctcaactacctggtcccggccacctgctgtgtc
atcatcctatttgtgtttgacttgccggcctacacgtcacccaccaacttccccgccgtg
ctctccctcttcctgctctacgggtggtccatcacccccgtcatgtacccggcctccttc
tggttcgaggtccccagctcagcctacgtgtttcttatcgtcatcaaccttttcatcggc
atcacggccaccgtggccaccttcctactgcagctctttgagcatgacaaggacctgaag
gttgtcaacagttacctgaaaagctgcttcctcatcttccccaactacaacctgggccac
gggctcatggagatggcctacaacgagtacatcaatgagtactacgccaagatcggccag
tttgacaagatgaagtccccgttcgagtgggacattgtcaccaggggcctggtggccatg
acggtcgagggcttcgtgggcttcctgctcaccatcatgtgtcagtacaacttcctgcgg
cagccgcagcgcatgcccgtgtcgacaaagcccgtggaggacgacgtggacgtggccagc
gagcggcagcgagtgctgcggggcgacgctgacaacgacatggtcaaaatcgagaacctg
accaaggtgtacaagtcgcggaagatagggcgcatcctggctgtggaccgcctgtgcctg
ggcgtgcgtcctggcgagtgctttggcctcctgggcgtcaatggcgcgggcaagaccagc
accttcaagatgctgacgggcgacgagagcacgacggggggcgaggcctttgtcaatggg
cacagcgtgctcaaggagctgctccaggtgcagcagagcctgggctactgcccacagttc
gacgccctgttcgatgagctcacggcccgggagcacctgcagctgtacacgcggctccgc
ggcatcccctggaaggatgaggcccgggtggtgaagtgggccctggagaagctggagttg
accaagtacgcggacaagcctgccggtacctacagcggaggcaacaagcggaagctgtcg
acagccattgccctcatcgggtaccctgcattcatcttcctggacgagcctaccacaggc
atggaccctaaggctcggcgcttcctctggaacctcattttggacctcatcaagacaggg
cgctcggtggtgctcacttcgcacagcatggaggagtgcgaggcgctgtgcacgcggctg
gccatcatggtgaacgggcgcctgcgctgtctgggcagcatccagcatctgaagaaccgg
ttcggggacggctacatgatcacggtgaggaccaagggcagccagaacgtgaaggacgtg
gtgcggttcttcagcaggaacttcccggaggccgtgctcaaggagcggcaccacacaaag
gtgcagtaccagctcaagtcggagcacatctcgctggcgcaggtgttcagcaagatggag
caggtggtgggcgtgctgggcctcgaggactactcagtcagccagaccaccctggacaac
gtgttcgtgaacttcgccaagaagcagagcgacaacctggagccgcaggagacagagcca
ccctcggcgctgcggtccccgctgggccgcctactcagctttttccggcctcggcccccc
accactgagctgcgggcgctcgtggccgacgagcccgaggacctggacacggaggacgag
ggcctcgtcagcttcgaggaggagagggcccagctctccttcaacacggacacgctctgc
tga
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integrated database retrieval system
