Phocoena sinus (vaquita): 116755428
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Entry
116755428 CDS
T07759
Symbol
TOPORS
Name
(RefSeq) E3 ubiquitin-protein ligase Topors isoform X1
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psiu04121
]
116755428 (TOPORS)
03036 Chromosome and associated proteins [BR:
psiu03036
]
116755428 (TOPORS)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
psiu03037
]
116755428 (TOPORS)
Enzymes [BR:
psiu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116755428 (TOPORS)
Ubiquitin system [BR:
psiu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116755428 (TOPORS)
UBL E3 ligases
116755428 (TOPORS)
Chromosome and associated proteins [BR:
psiu03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
116755428 (TOPORS)
Cilium and associated proteins [BR:
psiu03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
116755428 (TOPORS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-rbx1
zf-RING_5
zf-C3HC4_4
zf-ANAPC11
RING_XB3-XBAT31
Rad50_zn_hook
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
116755428
NCBI-ProteinID:
XP_032490770
Ensembl:
ENSPSNG00000002196
UniProt:
A0A8C9B9R4
LinkDB
All DBs
Position
6:complement(80467502..80478479)
Genome browser
AA seq
1044 aa
AA seq
DB search
MGSQQPPGSPLSREEGEAPLPTPAPEGRRRSRRVRLRGSCRHRPSFLGRRELATSSPAGP
ALVSSEIMASAAKEFKMDNFSPKAGTSKLQQTVPADASPDSKCPICLDRFDNVSYLDRCL
HKFCFRCVQEWSKNKAECPLCKQPFDSIFHSVRAEDDFKEYVLRPSYNGSFATPDVRRFR
YRTTMTRERSASIYSPNSTMNRRTTTPPDSGVIFEGLGISARPRDGEIPPFMRQIAIRRP
ATADERSLRKIQEQDIINFRRTLYRAGARVRNIEDGGRYRDISAEFFRRNPACLHRLVPW
LKRELTVLFGAHGSLVNIVQHIIMSNVTRYDLESQAFVSDLRPFLLNRTEHFIHEFISFA
RSPFNMAAFDQHANYDCPAPSYEEGSHSDSSVITISPDEAETQELDVSVATVSQAPWDDE
TPGPSYSSSEQVHAAMSSLLNTSDSSDEELVTGRATSQMQAVQTSDDINNDSDSSSDNCV
IVGFVKPLAERTPELVELSSDSEELGSYEKMETVKAQEQEQSYSSGDSDVSRCSSPHSVL
GKDEQINKGHCDSGTRIKSKKEEKQSVSLSSPRDLSSSIRGDRVYSPYTRRHRRRGRSRS
SDSCSQSRNGHDQKNHRKHHGKKRMKSRRSRSRESSRPRGRRDKKRSRTRDSSWSRRSQT
LSLSSESTSRSRSRSSDRGKRRSRSRNRDRYYLRNNYGSRYKWEYTYYSRNKDRDGYESS
YRRRTLSRAHYSRQSSSPEFRIQSFSERTNARKKNNHSERKYYYYERHRSRSLSSTRSKT
ASTGPDRVRNEKPGGKRKYKTRHLEGSNDVAQPSREFASKVKEGHYSKSSSKLDGSYKNE
SDSFSDSRSSDRETKHKRRKRTRSLSVEIVYEGKATDTTRHHKKKKKKHKRKHKKQHGDN
ASRSPVVITIDSDSDKDSEVKEDTECDLSGPQDPLQNEFLVPSLGPFETKDVVTIEDEFG
VLGKECDITTLNNNLNNANKTVDNISPQAASIEQTLDVREESTFASDLESQPSNVSYQTE
SSRRLPSPRISLMSVSLGRDHDMS
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atggggtcgcagcagccgccggggtctccgctctctcgcgaggagggtgaagcgcccctg
cctactcccgctcctgagggccggcggagaagtcgccgggttcgccttcgcggctcctgc
cgtcaccgacccagctttctgggccgtcgggagcttgccacgagctccccagccgggcct
gcgctggtatcctccgagataatggcatcagccgctaaggaatttaaaatggacaacttt
tcacctaaagctggcactagcaaattgcaacagacagtaccagctgatgcatctcctgat
tctaagtgtcctatatgcttggataggtttgataatgtgtcttacttagatcgctgttta
cataagttctgttttcgctgtgtacaggagtggtcaaaaaacaaagctgaatgtccacta
tgtaaacagccctttgattctattttccattctgtgagggcagaagatgactttaaggag
tatgtcctaaggccttcatacaatggttcttttgctacccctgatgttcgacgattccgc
tatcgtacaactatgacaagggaacgaagtgcttctatttattcacctaatagtaccatg
aatagaagaacaacaactccaccagatagtggagtaatatttgaagggttaggcatttca
gcaagacctagagatggtgaaattcctccatttatgagacagattgcaatacggaggcca
gctactgcagatgaaagatctttgcggaaaattcaagaacaggatattattaattttagg
cgaactctctatcgtgctggtgctcgagttagaaatattgaagatggtggccgctatagg
gatatttcagctgaatttttccgtagaaatccggcttgccttcacagattagtcccctgg
ttaaaacgtgaactcacagttctctttggagctcatggatcattagtgaatattgtccag
catatcatcatgagtaatgttactcgctatgacttggagagtcaggcgtttgtgtctgat
ttaaggccatttttacttaatcggactgagcattttatacacgaatttatcagttttgcc
cgatctccatttaacatggcagcctttgaccagcatgcaaattatgattgtcctgctcct
tcatatgaagaaggtagccattctgattcttcggtcataacaatatctcccgatgaagca
gagacccaagagctggatgttagtgtagctactgttagtcaggcaccatgggatgatgaa
actccagggccatcttattcaagctcagagcaggtacatgctgccatgtcttccctttta
aatacttccgacagttcagatgaagaacttgtaacaggaagagccacatctcagatgcaa
gcagtacaaaccagtgatgacataaataatgacagtgattcttcttcagataattgtgtc
attgttgggtttgttaaaccactagctgagaggaccccagaacttgttgaactgtcctct
gattctgaggagttaggttcctatgagaaaatggagaccgtgaaggcgcaagaacaagag
cagtcttacagttctggtgatagtgatgttagtagatgttcatctccacactctgtcctt
ggaaaggatgaacaaataaataaaggtcattgtgattctggtacaagaatcaaatcaaag
aaggaagagaaacagtctgtatcattgtcctctcccagagacctgagctcatccatcaga
ggagacagagtatattccccatatacccgcagacacagaaggaggggaagatccagaagt
tcagattcatgttcccagagtaggaatgggcatgatcagaagaatcataggaagcatcat
gggaagaaaagaatgaaaagcagacgatccagaagcagggagagtagcagacctagaggt
agaagagacaaaaagagatcaagaactagagatagcagttggtcaagaagaagccaaact
ctatctctaagtagtgaaagcacaagcagatcaagatctcgtagcagtgatcgtggtaaa
agaaggtcacggagcagaaatcgagatcgttactatttaagaaataattatggaagcaga
tacaagtgggagtatacttactatagtagaaacaaggacagggatggctatgaatcatct
tacaggaggaggactctgtccagagctcattattccagacaatcttcaagtccagaattt
agaattcagtctttttctgaaagaacaaatgccagaaaaaaaaataatcacagtgaaagg
aaatattactactatgaaaggcatagatcaaggagcctatctagtactagatcaaagact
gcatctacagggcctgaccgggtgagaaatgaaaagcctggtgggaaacgaaaatacaaa
acacggcatttggagggttctaacgatgtggctcaaccatctcgggaatttgcttctaaa
gtaaaggaaggtcattactcaaaatcttcatcaaaattggatggaagctacaaaaatgag
agtgacagcttttcagatagccgatcatcagacagagagacaaagcacaagagaagaaaa
aggacccggagcctaagtgtagagatagtttatgaagggaaagctaccgatacaactaga
caccataaaaagaaaaagaaaaaacataagaggaagcataagaaacaacatggcgataat
gcttcacgttccccagttgtgattaccattgacagtgacagtgataaggattctgaagta
aaggaggatacagaatgtgaccttagtggtcctcaagaccctctacaaaacgaatttttg
gttccttccttgggaccatttgaaactaaagatgtagttacaatagaagatgaatttggt
gtcctgggcaaggagtgtgacattaccacacttaataacaacttgaataatgccaacaaa
actgtagataatatttcaccccaggcagcttcaattgaacagactcttgatgtaagagaa
gagagcacctttgcctctgatttggagagccagcccagtaatgtctcttatcaaactgag
tcatcaaggcgattgccatctccacggatatcattaatgtcagtgtctcttggtagagac
catgatatgtcttaa
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integrated database retrieval system
