KEGG   Phocoena sinus (vaquita): 116755446
Entry
116755446         CDS       T07759                                 
Symbol
KDM4C
Name
(RefSeq) lysine-specific demethylase 4C isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
psiu  Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:psiu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:psiu03036]
    116755446 (KDM4C)
Enzymes [BR:psiu01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     116755446 (KDM4C)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     116755446 (KDM4C)
Chromosome and associated proteins [BR:psiu03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    116755446 (KDM4C)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN PHD LBR_tudor Rad9_Rad53_bind Tudor_5 DUF7141 SLX1_C
Other DBs
NCBI-GeneID: 116755446
NCBI-ProteinID: XP_032490811
Ensembl: ENSPSNG00000021418
UniProt: A0A8C9EBS2
LinkDB
Position
6:57317034..57745338
AA seq 1053 aa
MEVAKVESPLNPSCKIMTFRPCMEEFREFNKYLAYMESKGAHRAGLAKVIPPKEWKPRQC
YDDIDNLLIPAPIQQMVTGQSGLFTQYNIQKKAMTVKEFRQLANSGKYCTPRYLDYEDLE
RKYWKNLTFVAPIYGADINGSIYDEGVDEWNIAHLNTVLDVVEEECGISIEGVNTPYLYF
GMWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAQGFFPSSSQGCDAFL
RHKMTLISPSVLKKYGIPFDKITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATVRWID
YGKVAKLCTCRKDMVKISMDIFVRKFQPDRYQLWKQGKDIYTIDHTKPTPESTPEVKAWL
QRRRKVRKASRSFQCTGSHSKRPKNEEDEEVLATVDGAEGPTPDPDPDELKDSEKPEEAV
KLANTEAPSEEEASASRMQLDHNLSDNIRFAGNVCLSTSVAEKIKTEADQTCATIPPSNP
SDADDSMSSGHVMSKESEPPKLPWPKSPESCSSVVESNSALTEGEESDVESHGVGLEPGE
VPEVPSGERNGFKVPSRIEGETKTAKSWRHPLSKPPARSPMTLVKQQATSDEELPEVPSI
EEEVEETESWAKPLVHLWQTKSPNFVAEQEYNAAMGRMEPHCAICALLMPYYKPDSSNEE
NDSRWETKLDEVVTSGGKTKPLIPEMCFIYSEENIEYSPPNAFLEEDGTSLLISCAKCRV
RVHASCYGIPSHEICDGWLCARCKRNAWTAECCLCNLRGGALKETKNNKWAHVMCAVAVP
EVRFTNVPERTQIDVGRIPLQRLKLKCMFCRHRVKKVSGACIQCSYGRCPASFHVTCAHA
AGVLMEPDDWPYVVNITCFRHKVNPHVKSKAGEKGIAVGQTVITKHRNTRYYSCRVIAVT
AQTFYEVVFDDGSFSRDTFPEDIVSRDCVRLGPPAEGEVVQVKWPDGKLYGAKYLGSNVA
HMYQVEFEDGSQIAMKREDIYTLDEELPKRVKARFSTASDMRFEDTFYGTDIIQGEKKRQ
RVLSSRFKNEYVDDPVYRTFLKSSFQKKCQKRQ
NT seq 3162 nt   +upstreamnt  +downstreamnt
atggaggtggccaaggtggagagtccactcaaccccagctgtaagatcatgaccttcaga
ccctgcatggaggaattccgggagttcaacaaatacctcgcatacatggagtctaaagga
gcccatcgagcgggtcttgcaaaggttattcctcctaaggagtggaagccaaggcagtgc
tatgatgacattgacaatttgcttattccagcaccaattcagcagatggtcacagggcag
tcaggactgttcactcaatacaacatccagaaaaaagccatgacagtgaaggagttcagg
cagctggccaacagtggcaagtattgtactccgagatacttggattatgaagatttggag
cgcaagtactggaagaacttaaccttcgtggcacctatctatggtgcagacattaatggg
agcatatatgatgagggtgtggatgaatggaacatagctcacctaaacacagtcttggat
gtggttgaggaagagtgcggtatttctattgagggtgtaaatactccttatctctatttt
ggcatgtggaaaaccacatttgcgtggcacaccgaggatatggacctctacagcattaat
tatctccactttggagagcccaagtcttggtatgcaatacccccagagcatggaaaacga
ctggaaagactagctcaaggttttttcccaagcagttctcaagggtgtgatgcatttctt
cgccacaagatgacactgatatctccctcagtattgaagaaatatggtattccctttgac
aagatcacccaggaggctggcgaatttatgatcactttcccatatggctaccatgctggt
tttaatcatggtttcaactgtgcagaatctacaaattttgctactgtcagatggattgac
tatgggaaggttgctaaattgtgcacttgcaggaaagacatggtgaaaatttcaatggat
atctttgtgaggaaatttcagccagacagataccagctttggaaacaaggaaaggatata
tataccattgatcacacgaagcctactccagaatccacccctgaagtaaaagcatggctg
cagaggaggaggaaagtaagaaaagcatccaggagcttccagtgcactggttctcactct
aagaggcctaagaatgaggaagatgaggaagtgttagctacagttgatggggcagagggc
cccactcctgacccagacccagatgagctcaaggacagtgaaaagccagaagaagcagtg
aaactagcaaacacagaagcaccttcagaggaagaggcctctgctagcaggatgcagctg
gatcacaatttatcagataatatcagattcgcaggaaacgtctgcctaagcacatctgtg
gcagagaaaatcaaaactgaggctgaccaaacctgtgccacaattccaccttcaaatccc
agtgatgctgacgattccatgtctagtggccatgttatgtctaaggaatcagagccaccc
aagcttccatggccaaagtcacctgagtcgtgctcctctgtggtggagagtaacagtgct
ttgacagagggagaagagagtgatgtggagagccatggggtaggccttgaacctggggaa
gtcccagaggtccccagtggagagagaaatggcttcaaagtccccagtagaatagaagga
gaaaccaaaactgctaaaagttggcgccatccacttagtaagcctccagcaagatcccca
atgactctggtgaaacagcaggcaacgagtgatgaagagttgcccgaggttccatcgatt
gaggaggaagtggaagaaaccgagtcttgggcaaagcctctggtccacctttggcagacg
aagtccccaaactttgtggccgagcaagagtataatgcagccatgggcagaatggagccg
cactgtgccatctgtgctctgctcatgccctactacaagccagatagcagcaatgaagaa
aatgattctagatgggagacaaaattagacgaagtggttacttcaggaggaaagactaag
cccctcattccagagatgtgttttatttatagcgaggaaaatatagaatattctccacct
aacgccttcctggaagaggatggaacaagtcttctgatttcctgtgcaaagtgccgcgta
cgggttcatgcaagttgttacggtatcccttctcatgagatctgtgatggatggctatgt
gcccggtgcaaaagaaatgcatggacagccgagtgctgtctctgcaatttgagagggggt
gctcttaaggaaactaagaacaataagtgggcccatgtcatgtgcgccgtcgcggtccca
gaagtccgattcactaatgttccagaaaggacacagatagatgtaggcagaataccttta
caaaggttaaaattgaaatgcatgttctgcaggcaccgggttaagaaggtctctggagcc
tgcatccagtgttcctatggccgatgcccagcctcattccacgtcacctgtgctcatgct
gctggggtgctgatggagcctgacgattggccgtatgtggtgaacatcacgtgctttcga
cataaagtcaacccacacgtgaagtccaaggctggcgagaagggcatcgctgtggggcag
acggtcatcacgaagcatcgcaacacccggtactacagctgcagggtgattgctgtgacg
gcgcagaccttctatgaggtcgtgtttgatgacggctccttcagcagagacacattcccc
gaggatatcgtgagccgagactgtgtgaggctaggccctcctgccgagggagaagtcgtt
caagtcaagtggcctgatggcaaactctacggggcaaaatatctcggatcaaatgttgcc
cacatgtaccaggttgaatttgaagatggatcccagatagcaatgaagagagaggacatc
tacactttagatgaagagttacccaagagagtgaaagctcgtttttccacagcctctgat
atgcgatttgaagacacattttatggaacggacataatccaaggggagaaaaagagacag
agagtgctgagctccaggtttaagaacgaatatgtggatgaccccgtctaccgcacgttt
ttgaagagctctttccagaagaagtgtcagaagaggcaatag

DBGET integrated database retrieval system