Phocoena sinus (vaquita): 116755484
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Entry
116755484 CDS
T07759
Symbol
TNC
Name
(RefSeq) tenascin isoform X1
KO
K06252
tenascin
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04151
PI3K-Akt signaling pathway
psiu04510
Focal adhesion
psiu04512
ECM-receptor interaction
psiu05165
Human papillomavirus infection
psiu05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
116755484 (TNC)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116755484 (TNC)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116755484 (TNC)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
116755484 (TNC)
09172 Infectious disease: viral
05165 Human papillomavirus infection
116755484 (TNC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
psiu00536
]
116755484 (TNC)
Glycosaminoglycan binding proteins [BR:
psiu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
116755484 (TNC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
EGF_TEN
Fibrinogen_C
EGF_Teneurin
EGF_2
EGF_Tenascin
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Fn3_Dep-1_2nd
NDNF
DUF4998
fn3_2
EGF
Motif
Other DBs
NCBI-GeneID:
116755484
NCBI-ProteinID:
XP_032490917
Ensembl:
ENSPSNG00000007222
UniProt:
A0A8C9BXQ9
LinkDB
All DBs
Position
6:19088287..19182404
Genome browser
AA seq
2201 aa
AA seq
DB search
MGVVTRLLAGIFLALLALPAEGGVLKKVIRHKRQSGVNVTLPEENQPVVFNHVYNIKLPV
GSQCSVDLESASGEKDLVPLSEPRESFQEHTVDGENQIVFTHRINIPRRACGCAAAPDIK
ELLSRLEELENLVSSLREQCTLGAGCCFQPAEGHLDTKPFCSGRGNFSTEGCGCVCEPGW
KGPNCSEPECPGNCHLRGQCLDGQCVCDKGFTGEDCGQLACPSDCNDQGKCMNGTCVCFE
GYSGVDCSQEPCPVPCSEEHGRCVDGRCVCQDGFAGEDCNEPLCLHNCHGRGSCVENECV
CDEGFTGDDCGELVCPNDCFDRGRCVNGTCYCDEGFAGEDCGQLACPNACHGRGRCDEGQ
CVCDEGFAGADCSEKRCPSDCHDRGRCLDGHCECDDGFTGADCGELRCPRDCSGHGRCVN
GQCVCDEGRTGEDCGQLRCPNDCHGRGRCVQGLCECELGFQGYDCGEMSCPHDCHQHGRC
LNGMCICDDAYMGEDCRELRCPRDCSQRGRCVDGRCVCEDGFAGPDCADLSCPGDCHGRG
RCVDGQCVCHEGFTGKDCGQRRCPDDCHGQGRCVDGQCVCHEGFTGLDCGQRSCPNDCSN
WGQCVSGRCICNEGYAGEDCSQVSPPKDLIVTEVTEETINLAWENEMRVTEYLIVYTPTH
EDGLEMQFRVPGNQTSTTIQELEPGVEYLIRVFAVLENKKSIPVSARVATYLPTPEGLKF
KSIKETSVEVEWDPVDIAFETWEVIFRNMNKEDEEEITKSLRRPETTYRQTGLAPGQEYE
ISLHIVKNNTRGPSLKRVTTTRLDSPSQIEVKDITDTTALITWSKPLAEIDSIELTYGIK
DVPGDRTSIDLTHEENQYSIGNLKPDTEYEVSLISHRADMSSSPARETFTTGLDAPRNLR
RISQTDNSITLEWRNVKAATDSYRIKYAPISGGDHAEVEVPRRQQTTTKTTLTGLRPGTE
YGIGVSAVKGDKESDPATVNAATDLDAPRDLRVSEPTETSLTLLWQTPLAKYDRYRLNYS
LPSGQPVEVQLPRGTTSYVLKGLEPGQEYTILLTAEKGRHKSKPARVQASTDHAPEMEKL
TVTEAGWDGLKLNWTTADQAYEHFVIQVQEANRVEAAQNLTVPGSLRAADIRGLKAATPY
RVTIYGVIRGYRTPMLSAEASTGEAPHLGEVTVSEVGWDALKLHWTAPEGAYEQFLIQVQ
ETDTEEAAQNLTVPGGLRSVDLPGLKADTHYSVTIRGVTRDFSTTPLSVEVLTEEVPDLG
NLTVTEVSWDALRLDWTSPDGIYEQFVIEIQEADQTQEAHSLTVPGSLCSVEIPGLRAGT
PYTITLRGEVRGRSTQPLAVEVITAELPQLGHLAVTEAGWDGLKLNWTTADQAYEHFVIQ
VQEANRVEAAQNLTVPGSLRAADIRGLKAATPYRVTIYGVIRGYRTPMLSAKASTAGEPE
IGNLNVSDITPESFNLSWTATDGAFKTFTIEIIDSNRFLETMEYNISGAERTAHISGLRP
NNDFIVYLSGLTPSIRTKTISATATTEALPLLENLTISDINPYGFTVSWMALKNAFDRFL
VTVVDSGKLLDPQEFTLSGTQRKLELRGLITGIGYEVMVSGFTQGHQTKPLRAEIVTEAE
PEVDNLLVSDATPDGFRLSWTADEGVFDSFVLKIRDTKKQSEPLEITLLAPERTRDITGL
REATEYEIELYGISRGKLSQPVSAIATTAMGSPKEIVFSDITENSATVSWKAPTTQVESF
RVTSVPTAGGTPSVVTVDGTKTQTRLLRLLPGVEYLVSVIALKGFEESTPVSGMLTTALD
GPSGLVTANITDSEALAMWQPAIAPVDNYVISYTGEREPETTRKVSGNTVEYALTNLEPA
TEYTLRIFAEKGPQKSSTITTKFMTDLDSPRDFTATEVQSETAILTWRPPRASVTGYLLV
YESVDGTTKEVVVDPDTTSYSLAELSPSTHYMAKIQALNGPLRSKIIKTTFTTTGVLYPF
PRDCSQAMLNGDTTSGVYTVYLNNDKTQRQEVFCDMTSDGGGWIVFLRRKNGREDFYRNW
KAYTAGFGDLKEEFWLGLDTLNKITAQGQYELRVDLRDHGQSAYAVYDKFSVGDARTRYR
LKVEGYSGTAGDSMAYHNGRSFSTFDKDTDSAITNCALSYKGAFWYKNCHRVNLMGRYGD
NNHSQGVNWFHWKGHEYSIQFAEMKLRPSNFRNLEGRRKRA
NT seq
6606 nt
NT seq
+upstream
nt +downstream
nt
atgggggtcgtgactcggctgttggcaggcatcttcctagctctgcttgcccttcctgcc
gaaggtggcgtcctcaagaaagtcatccggcacaagcgacagagtggggtgaatgtcacc
ctgccagaggagaaccagccggtggtgtttaatcacgtctacaacatcaagctgcctgtg
gggtcccagtgctcggtggatctggaatcagccagtggggagaaagacttggtcccactg
tcagagcccagggagagcttccaggagcacacggtagatggggaaaaccagatcgtcttc
acacaccgcatcaacatcccccgccgggcctgtggttgtgccgctgctcctgacatcaag
gagcttctgagcagactggaggagctagagaacctggtgtcttccctgcgggagcagtgc
accttgggagcaggctgctgcttccagcctgccgaaggccacctggacaccaaacccttc
tgcagcggccggggcaacttcagcactgaaggctgtggctgtgtgtgtgaaccgggctgg
aaaggccccaactgctctgagcctgaatgtccaggcaactgtcacctgcgaggccagtgc
ctggacgggcagtgcgtgtgtgacaagggcttcacgggggaggactgcggccagctggcc
tgccccagcgactgcaatgaccagggcaagtgcatgaacgggacctgcgtctgcttcgaa
ggctattcgggggtggactgcagccaggagccctgcccggtgccctgtagcgaggagcac
ggccgctgcgtggacggccgctgtgtgtgccaggacggcttcgccggcgaggactgcaac
gagcccctgtgtctgcacaactgccacggccgcgggagctgcgtggagaacgagtgcgtg
tgcgatgagggcttcacgggcgacgactgcggcgagctcgtctgccccaacgactgcttc
gaccgcggccgctgcgtcaacggcacctgctactgcgacgagggcttcgcgggtgaggac
tgcggccagctcgcctgccccaacgcctgccacggccgcggccgctgcgacgagggccag
tgcgtgtgcgacgagggcttcgcgggtgcggactgcagcgagaagcgctgtccctctgac
tgccacgaccgcggccgctgcctggacgggcactgcgagtgcgacgacggcttcacgggc
gcggactgcggcgagctccggtgtccccgcgactgcagcggccatggccgctgcgtcaac
gggcagtgcgtgtgcgacgagggtcgcaccggggaggactgcgggcagctgcggtgcccc
aacgactgtcacggccgcgggcgctgcgtgcaggggctgtgcgagtgcgaactcggcttc
cagggctatgactgtggcgagatgagctgcccccatgactgtcaccagcacggccgctgc
ctgaatggcatgtgtatctgtgacgatgcctacatgggtgaggactgccgggagctgcgc
tgccctcgggactgcagccagcggggccgctgcgtggacgggcggtgtgtgtgcgaggac
ggcttcgccggccccgactgcgcagacctctcctgtcccggcgactgccacggccggggc
cgctgcgtggacggccagtgcgtgtgccacgagggcttcacgggcaaggactgtgggcag
cgcaggtgtcccgacgactgtcacggccagggccgctgcgtggacggccagtgcgtgtgc
cacgagggcttcactgggttggactgcgggcagcgctcctgccccaacgactgcagcaac
tgggggcagtgcgtctccggccgctgcatctgcaatgagggctacgccggagaagactgc
tcccaagtgtcccctcccaaagacctcatcgtgacagaagtgacagaagagaccataaac
ctggcctgggaaaatgagatgcgggtcacagagtacctcatcgtgtacacgcccacccac
gaagacggcctagaaatgcagttccgcgtccctggaaaccagacgtccaccaccatccag
gagttggagcctggcgtggagtaccttatccgcgtgtttgccgtcctggagaacaagaag
agcattcctgtcagcgccagggtggccacttacctgcctacacctgaaggtctaaaattc
aagtccatcaaggagacatctgtggaagtggagtgggatcctgtggacatcgcttttgaa
acgtgggaggtcatcttccggaatatgaataaagaagatgaggaagagatcaccaaaagc
ctgcggaggccggagaccacgtaccggcaaactggcctggctcccgggcaagagtatgag
atatctctgcacatcgtgaaaaacaatacccggggcccaagcctgaagagggtgacaaca
acccgcttggactcccccagccagatcgaagtgaaagacattacggacaccactgctctg
atcacctggtccaagcccctggccgagatcgacagcattgagctcacatacgggatcaaa
gatgtgccaggcgaccgaaccagcatcgacctcacacatgaggagaaccagtactccatc
gggaacctgaagccagacacagagtacgaggtttccctcatctcccacagggccgacatg
tctagcagccccgcgagagagaccttcacaacaggcctggatgcgcccagaaatctccgc
cgcatctcccagacagacaacagcatcaccctggagtggaggaacgtcaaggcggccacc
gacagttacagaattaagtacgcacccatctccggaggtgaccatgccgaggtagaagtc
cccaggaggcaacaaaccacaaccaaaactacactcacaggtctgaggccaggaaccgaa
tatggtattggagtgtctgccgtgaagggggacaaggagagtgacccagccaccgtcaat
gcggccacagacctggacgcgcccagggaccttcgggtttctgaacctacagagaccagc
ttgaccctgctctggcagacgccactggccaagtatgaccgttaccgcctaaactacagt
cttccctcgggccagccagtggaggtgcagctccccagaggcaccacctcctacgtcctg
aaaggcctggaacctgggcaggaatacaccatcctcctcacagcagagaagggcaggcac
aagagcaagcctgcacgggtacaggcatccacagaccacgcccctgaaatggaaaagctc
accgtgaccgaggctggctgggacggcctcaaactcaactggaccacagctgaccaggcc
tatgagcattttgtcattcaggtgcaggaggccaacagggtggaggcagctcagaacctc
acggtgcccggcagcctgcgggctgcggacatccggggcctcaaggccgccaccccttac
agagtcaccatctacggggtgatccggggctatagaacaccaatgctctctgctgaggcc
tccacaggagaagctccccatttgggagaggtcacggtgtccgaggtgggctgggatgcc
ctaaaactccactggacagctccggaaggagcctacgagcagtttctcattcaggtgcag
gaaactgacacagaggaggcagcccaaaacctcactgtcccgggaggactgaggtccgtg
gacctgcctgggctcaaggcagacactcactatagcgtcaccatccgcggggtgactcgg
gacttcagcacaacccctctctctgttgaagtcttgacagaggaggttccagatctgggg
aacctcaccgtgactgaggttagctgggatgccctcagactggactggaccagcccagat
gggatctatgagcagtttgtcattgagatccaggaggctgaccagacccaagaagctcac
agtctcacggttcctggcagcctgtgctccgtggaaatcccaggcctcagggctggtacc
ccttatacaattaccctgcgcggcgaggtcaggggccgcagcactcagccccttgctgtg
gaggtcatcacagcggagctcccccagctgggacacttagccgtgactgaggctggctgg
gacggcctcaaactcaactggaccacagctgaccaggcctatgagcattttgtcattcag
gtgcaggaggccaacagggtggaggcagctcagaacctcacggtgcccggcagcctgcgg
gctgcggacatccggggcctcaaggccgccaccccttacagagtcaccatctacggggtg
atccggggctacagaacaccaatgctctctgctaaggcctccacagccggagaacctgaa
atcggaaacttaaatgtttccgacatcactcctgagagcttcaatctctcctggacagct
accgatggggccttcaagacctttaccattgaaattattgattccaataggttcctggaa
acgatggaatataacatctctggtgctgaacgaactgctcacatctcagggctccgccct
aataatgattttattgtctacctctctggactcactcccagcatccggaccaaaaccatc
agtgccacggccaccacagaggccctgccccttctggaaaacctaaccatttccgacatt
aatccctacgggttcacagtttcctggatggcattgaagaatgcctttgacagattccta
gtaacggtggtggattctgggaagctgctggacccccaggaattcacactttcaggaacc
cagaggaagctggagcttagaggcctcataaccggcattggctatgaggtcatggtctct
ggcttcacccaagggcaccaaaccaagcccttgagggctgagattgttacagaagccgag
ccagaagttgacaaccttctggtttcagatgccaccccagacggtttccgtctgtcctgg
acagctgatgaaggggtcttcgacagctttgtcctcaaaatcagagataccaaaaagcag
tctgaaccactggaaataaccctacttgcccccgaacgtaccagggacataacaggtctc
agagaggccactgaatacgaaattgaactctatggaataagccgtggaaagctatcccag
ccagtcagtgctatagcaacaacagccatgggctccccgaaggaaatcgttttctcagac
atcactgaaaactcagccactgtcagctggaaggcacccactacccaggtggagagcttc
cgggttacctctgtacccactgcaggaggtacaccctcagtggtaactgtggatgggacc
aagactcagaccaggctgctgagactcttacctggagtggagtacctcgtcagcgtcatc
gccctgaagggctttgaagaaagcacgcctgtctcgggaatgctcaccacagctctggat
ggcccatctggcctggtgacagccaacatcaccgactcagaagccttggccatgtggcag
ccggccatcgcccctgtggacaattatgtcatctcctacacaggggagagagagccagaa
actacccgcaaggtgtccgggaacacggtggagtatgcgctgaccaacctcgagcctgcc
acggaatacacgctgaggatctttgcagagaaagggccccaaaagagctcaactatcacc
accaagttcatgacagacctcgattctccaagagacttcactgctactgaggttcagtcg
gaaactgccattctcacctggagacctccccgggcatctgtcactggttacctgttggtg
tatgaatctgtggacggtacaaccaaggaggttgttgtggatccagacaccacttcttat
agcctggcagagctgagcccatccacccactacatggccaagatccaggcactgaatggg
cccctgagaagcaagatcatcaagaccaccttcaccacaactggagtcctgtacccattc
cccagggactgctcccaagccatgctgaatggagacacgacctctggcgtctacaccgtt
tatctgaacaacgacaagacccaaaggcaggaagtcttctgtgacatgacctctgacggg
ggtggatggatcgtgttcctgagacgcaaaaatggacgtgaggatttctatcgaaactgg
aaggcctacactgctggatttggggacctaaaagaagaattctggcttgggctggacacc
ctgaacaaaatcacagcccaagggcagtacgagctccgggtggacctgcgggaccacggg
cagtcagcctatgccgtctacgacaagttcagcgtgggagacgcccggactcgctaccgg
ctgaaggtggaggggtacagcgggacagcaggtgactccatggcctaccacaacggcaga
tccttctccacctttgacaaggacacagactcggccatcaccaactgtgccctgtcctac
aagggggctttctggtacaagaactgccaccgcgtcaacctgatggggagatacggggac
aataaccacagtcagggtgttaactggttccactggaagggccacgagtattcaatccag
tttgctgagatgaagctgagacccagcaacttccgaaacctcgaaggcaggcgcaaacgg
gcgtaa
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integrated database retrieval system
