KEGG   Phocoena sinus (vaquita): 116755535
Entry
116755535         CDS       T07759                                 
Symbol
WHRN
Name
(RefSeq) whirlin isoform X1
  KO
K21879  whirlin
Organism
psiu  Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:psiu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:psiu03037]
    116755535 (WHRN)
Cilium and associated proteins [BR:psiu03037]
 Primary cilia and associated proteins
  USH complex and associated proteins
   116755535 (WHRN)
SSDB
Motif
Pfam: PDZ PDZ_6 PDZ_2 CCM2_C HHD_RTEL1 USH1C_N
Other DBs
NCBI-GeneID: 116755535
NCBI-ProteinID: XP_032491026
Ensembl: ENSPSNG00000007772
UniProt: A0A8C9BI61
LinkDB
Position
6:19619675..19708054
AA seq 919 aa
MNAHLDGLSVSSSSTGSLGSAAGAGGGGGGAGLRLLSANVRQLHQALTALLSEAEREQFT
HCLNAYHARRNVFDLVRTLRVLLDSPVKRRLLPMLRLVIPRSDQLLFDQYTAEGLYLPAT
SSYRQPTWGGPDGAGPGEVRLVSLRRAKAHEGLGFSIRGGSEHGVGIYVSLVEPGSLAEK
EGLQVGDQILRVNDKSLARVTHAEAVKALKGSKKLVLSVYSTGRIPGGYVTNHIYTWVDP
QGRSISPPSGLPQPHGSTLRQHEGDRRSTLHLLQGGDEKKVNLVLGDGRSLGLTIRGGAE
YGLGIYITGVDPGSEAESSGLKVGDQILEVNGQSFLNILHDEAVRLLKSSQHLILTVKDV
GRLPRARTTVDKTKWIASSRIGDPATNSIGFPGDLTAEGTNKLGFYKGPAGSQVTLSSLG
NQTRVLLEAQARHLLSAQERATMAYYLEEYRGGSVSVDALVMALFELLNTHAKFLLLSEV
RGTISPQDLDRFDHLVLRREIESMKARQPPSPVAGDTYSMVSCSDTGSSTGSHGTSTTVS
SARERLLWLIDLMENTLDLEETGEAVQGNMNTLSDVSLDDVKSTSKGLPSYKPPPPPSPL
PQSHDHLITQTRKPGREDLQPPSSASSHAGIVFSAPRNRSPPAGTSPAPEASSAQDSPSS
PIYASISPANPGSKRPLDAHLALVNQHPIGPFPRVQSPPHLKSPPAEATLAGGSLPPPSP
SGHPDQTGTNQHFVMVEVHRPDSEPDVNEVRALPQTRTASTLSQLSDSGQTLSEDSGVDA
GEAEASAPGRGRQVVSAKSRSSKETPRNERTTEGAAKPPGLLEPTSTLVRVKKSAATLGI
AIEGGANTRQPLPRIVTIQRGGSAHNCGQLKVGHVILEVNGATLRGKEHREAARIIAEAF
KSKERDYIDFLVTEFNVML
NT seq 2760 nt   +upstreamnt  +downstreamnt
atgaacgcgcatctggacggcctgtcggtgagctcgtcctccaccggctcgctgggctcc
gcggccggggcgggcggcggcggcgggggcgcggggctgcgactgctgtctgccaacgtg
cgccagctgcaccaggcgctgacggcgctgctgagcgaggcggagcgggagcagttcacg
cactgtctgaacgcctaccacgcgcgccgcaacgtcttcgacctggtgcgcaccctgcgc
gtgctgctggacagcccggtcaagcggcgtctgctgcccatgctgcggctggtcatcccg
cgctctgaccagctgctcttcgaccaatacactgccgagggtctctacctgcccgccacc
tcctcctacaggcaacccacctggggcggccccgacggcgcggggcccggggaggtgcgc
ctagtgagcctacggcgcgccaaggcccacgagggcttgggcttcagcatccgtgggggc
tcggagcatggcgtgggcatctatgtgtcgctggtggagccaggctctctggccgagaag
gaagggctgcaagtcggggaccagattctgcgtgtcaacgacaaatccctggcccgggtg
acccacgctgaggccgtcaaggctctcaagggctccaagaagctggtgctgtcggtgtac
tcaacggggcgcatccctggcggctacgtcaccaaccatatctacacctgggtagacccc
caaggccgcagcatctctccgccctcgggcctgccccaaccccatggcagtaccctacgg
cagcacgagggtgaccggaggagcaccctacacctcctgcaaggcggggatgagaaaaag
gtgaacctggtgctgggggatggccggtccctgggcctcaccatccgtgggggagccgag
tacggcctgggcatttacatcactggcgtggacccgggctctgaagcggaaagcagcggg
ctcaaggttggggaccagattctggaggtgaatgggcagagctttctcaacatcctgcac
gacgaagcggtcaggttgctcaagtcatcccagcacctcatcctgacagtgaaggatgtc
gggaggctgccccgtgcccgaaccaccgtggacaagaccaagtggattgccagttcccgg
atcggggaccccgccacgaactcaataggctttcctggggatctcacagcagaggggacc
aacaagctggggttttacaaggggccagccggctcccaggtgaccctgagcagcctgggg
aaccagacgcgggtgctgctggaggcgcaggcgcggcacctgctgagcgcgcaggagcgt
gccaccatggcctactacctggaggagtaccgcggcggcagcgtgtccgtggacgccctc
gtcatggccctgtttgagctgctcaacacccatgccaagttcttgctcctgtctgaggtg
agaggtaccatctccccccaagacctggaccgcttcgaccacctggtgctgaggcgggag
atcgagtcaatgaaggcacggcagccccccagccctgtggccggggacacctactccatg
gtctcctgcagcgacacaggctcatccacgggcagccacggcacctccaccactgtcagc
tcagccagggagcggctgctgtggcttatagacctgatggagaacactctggacctggag
gagactggggaggctgtccagggcaatatgaacaccctctcagacgtttccctggatgat
gtcaagtccacctccaagggactgcctagctacaagccaccgcctcccccatcacctttg
ccccaaagccacgaccacctgatcacccagacgaggaagccaggcagagaggacctccag
ccgccttcctccgcgtcttcccacgcgggcatcgtcttctctgctccgcggaaccgcagc
ccgccggcgggcacctcccccgccccagaggcctcctcagcacaggactcgccctcctcc
cccatctacgcctccatctccccggccaaccccggctccaagaggccgctggacgcccat
ctggccctggtcaaccagcaccccattggtcccttcccgcgggtccagtcacccccgcac
ctgaaaagcccccctgcagaggccacgctggcggggggcagccttccaccaccctccccc
tccggccacccagaccagacgggcacgaaccagcactttgtcatggtggaggtgcaccgc
ccagacagcgagcccgacgtgaatgaagtgagggcgctgccccagacacgcacagcctcc
acactctcccagctctcggacagcgggcagaccctgagtgaggacagtggcgtggacgcc
ggcgaggcagaagccagcgccccgggccgaggcagacaggtggtgtccgccaagagtagg
agtagcaaggagacgcctcggaacgagaggaccaccgagggggctgccaaaccgcccgga
ctcctggagcccacctccaccctggtccgcgtgaagaaaagtgcagccaccctgggcatc
gccatcgagggcggcgccaacacccgccagcccctgcctaggatcgtcacgattcagcga
ggcggctcagcccacaactgcgggcagctcaaggtgggccacgtgatcctggaggtgaac
ggggcgacgcttcggggcaaggagcaccgcgaggccgcgcgcatcatcgcagaggccttc
aagagcaaggagcgtgactacatcgactttctggtcaccgagttcaatgtgatgctctag

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