Phocoena sinus (vaquita): 116755535
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Entry
116755535 CDS
T07759
Symbol
WHRN
Name
(RefSeq) whirlin isoform X1
KO
K21879
whirlin
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
psiu03037
]
116755535 (WHRN)
Cilium and associated proteins [BR:
psiu03037
]
Primary cilia and associated proteins
USH complex and associated proteins
116755535 (WHRN)
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Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
CCM2_C
HHD_RTEL1
USH1C_N
Motif
Other DBs
NCBI-GeneID:
116755535
NCBI-ProteinID:
XP_032491026
Ensembl:
ENSPSNG00000007772
UniProt:
A0A8C9BI61
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Position
6:19619675..19708054
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AA seq
919 aa
AA seq
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MNAHLDGLSVSSSSTGSLGSAAGAGGGGGGAGLRLLSANVRQLHQALTALLSEAEREQFT
HCLNAYHARRNVFDLVRTLRVLLDSPVKRRLLPMLRLVIPRSDQLLFDQYTAEGLYLPAT
SSYRQPTWGGPDGAGPGEVRLVSLRRAKAHEGLGFSIRGGSEHGVGIYVSLVEPGSLAEK
EGLQVGDQILRVNDKSLARVTHAEAVKALKGSKKLVLSVYSTGRIPGGYVTNHIYTWVDP
QGRSISPPSGLPQPHGSTLRQHEGDRRSTLHLLQGGDEKKVNLVLGDGRSLGLTIRGGAE
YGLGIYITGVDPGSEAESSGLKVGDQILEVNGQSFLNILHDEAVRLLKSSQHLILTVKDV
GRLPRARTTVDKTKWIASSRIGDPATNSIGFPGDLTAEGTNKLGFYKGPAGSQVTLSSLG
NQTRVLLEAQARHLLSAQERATMAYYLEEYRGGSVSVDALVMALFELLNTHAKFLLLSEV
RGTISPQDLDRFDHLVLRREIESMKARQPPSPVAGDTYSMVSCSDTGSSTGSHGTSTTVS
SARERLLWLIDLMENTLDLEETGEAVQGNMNTLSDVSLDDVKSTSKGLPSYKPPPPPSPL
PQSHDHLITQTRKPGREDLQPPSSASSHAGIVFSAPRNRSPPAGTSPAPEASSAQDSPSS
PIYASISPANPGSKRPLDAHLALVNQHPIGPFPRVQSPPHLKSPPAEATLAGGSLPPPSP
SGHPDQTGTNQHFVMVEVHRPDSEPDVNEVRALPQTRTASTLSQLSDSGQTLSEDSGVDA
GEAEASAPGRGRQVVSAKSRSSKETPRNERTTEGAAKPPGLLEPTSTLVRVKKSAATLGI
AIEGGANTRQPLPRIVTIQRGGSAHNCGQLKVGHVILEVNGATLRGKEHREAARIIAEAF
KSKERDYIDFLVTEFNVML
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgcatctggacggcctgtcggtgagctcgtcctccaccggctcgctgggctcc
gcggccggggcgggcggcggcggcgggggcgcggggctgcgactgctgtctgccaacgtg
cgccagctgcaccaggcgctgacggcgctgctgagcgaggcggagcgggagcagttcacg
cactgtctgaacgcctaccacgcgcgccgcaacgtcttcgacctggtgcgcaccctgcgc
gtgctgctggacagcccggtcaagcggcgtctgctgcccatgctgcggctggtcatcccg
cgctctgaccagctgctcttcgaccaatacactgccgagggtctctacctgcccgccacc
tcctcctacaggcaacccacctggggcggccccgacggcgcggggcccggggaggtgcgc
ctagtgagcctacggcgcgccaaggcccacgagggcttgggcttcagcatccgtgggggc
tcggagcatggcgtgggcatctatgtgtcgctggtggagccaggctctctggccgagaag
gaagggctgcaagtcggggaccagattctgcgtgtcaacgacaaatccctggcccgggtg
acccacgctgaggccgtcaaggctctcaagggctccaagaagctggtgctgtcggtgtac
tcaacggggcgcatccctggcggctacgtcaccaaccatatctacacctgggtagacccc
caaggccgcagcatctctccgccctcgggcctgccccaaccccatggcagtaccctacgg
cagcacgagggtgaccggaggagcaccctacacctcctgcaaggcggggatgagaaaaag
gtgaacctggtgctgggggatggccggtccctgggcctcaccatccgtgggggagccgag
tacggcctgggcatttacatcactggcgtggacccgggctctgaagcggaaagcagcggg
ctcaaggttggggaccagattctggaggtgaatgggcagagctttctcaacatcctgcac
gacgaagcggtcaggttgctcaagtcatcccagcacctcatcctgacagtgaaggatgtc
gggaggctgccccgtgcccgaaccaccgtggacaagaccaagtggattgccagttcccgg
atcggggaccccgccacgaactcaataggctttcctggggatctcacagcagaggggacc
aacaagctggggttttacaaggggccagccggctcccaggtgaccctgagcagcctgggg
aaccagacgcgggtgctgctggaggcgcaggcgcggcacctgctgagcgcgcaggagcgt
gccaccatggcctactacctggaggagtaccgcggcggcagcgtgtccgtggacgccctc
gtcatggccctgtttgagctgctcaacacccatgccaagttcttgctcctgtctgaggtg
agaggtaccatctccccccaagacctggaccgcttcgaccacctggtgctgaggcgggag
atcgagtcaatgaaggcacggcagccccccagccctgtggccggggacacctactccatg
gtctcctgcagcgacacaggctcatccacgggcagccacggcacctccaccactgtcagc
tcagccagggagcggctgctgtggcttatagacctgatggagaacactctggacctggag
gagactggggaggctgtccagggcaatatgaacaccctctcagacgtttccctggatgat
gtcaagtccacctccaagggactgcctagctacaagccaccgcctcccccatcacctttg
ccccaaagccacgaccacctgatcacccagacgaggaagccaggcagagaggacctccag
ccgccttcctccgcgtcttcccacgcgggcatcgtcttctctgctccgcggaaccgcagc
ccgccggcgggcacctcccccgccccagaggcctcctcagcacaggactcgccctcctcc
cccatctacgcctccatctccccggccaaccccggctccaagaggccgctggacgcccat
ctggccctggtcaaccagcaccccattggtcccttcccgcgggtccagtcacccccgcac
ctgaaaagcccccctgcagaggccacgctggcggggggcagccttccaccaccctccccc
tccggccacccagaccagacgggcacgaaccagcactttgtcatggtggaggtgcaccgc
ccagacagcgagcccgacgtgaatgaagtgagggcgctgccccagacacgcacagcctcc
acactctcccagctctcggacagcgggcagaccctgagtgaggacagtggcgtggacgcc
ggcgaggcagaagccagcgccccgggccgaggcagacaggtggtgtccgccaagagtagg
agtagcaaggagacgcctcggaacgagaggaccaccgagggggctgccaaaccgcccgga
ctcctggagcccacctccaccctggtccgcgtgaagaaaagtgcagccaccctgggcatc
gccatcgagggcggcgccaacacccgccagcccctgcctaggatcgtcacgattcagcga
ggcggctcagcccacaactgcgggcagctcaaggtgggccacgtgatcctggaggtgaac
ggggcgacgcttcggggcaaggagcaccgcgaggccgcgcgcatcatcgcagaggccttc
aagagcaaggagcgtgactacatcgactttctggtcaccgagttcaatgtgatgctctag
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