Phocoena sinus (vaquita): 116755573
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Entry
116755573 CDS
T07759
Symbol
F11R
Name
(RefSeq) junctional adhesion molecule A isoform X1
KO
K06089
junctional adhesion molecule 1
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04514
Cell adhesion molecule (CAM) interaction
psiu04517
IgSF CAM signaling
psiu04530
Tight junction
psiu04670
Leukocyte transendothelial migration
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
116755573 (F11R)
04517 IgSF CAM signaling
116755573 (F11R)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
116755573 (F11R)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
116755573 (F11R)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
psiu04515
]
116755573 (F11R)
04090 CD molecules [BR:
psiu04090
]
116755573 (F11R)
Cell adhesion molecules [BR:
psiu04515
]
Immunoglobulin superfamily
CTX family
116755573 (F11R)
CD molecules [BR:
psiu04090
]
Proteins
116755573 (F11R)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
V-set
C1-set
C2-set_2
V-set_CD47
Ig_6
Adeno_E3_CR1
Ig_C17orf99
Invasin_D3
DUF5626
Big_3
Motif
Other DBs
NCBI-GeneID:
116755573
NCBI-ProteinID:
XP_032491113
Ensembl:
ENSPSNG00000008651
LinkDB
All DBs
Position
1:complement(118175317..118219252)
Genome browser
AA seq
299 aa
AA seq
DB search
MLGTKAKVGRKQLLLFTSMILCSLALGRGAVQTSEPVVQVAENKPAKLSCSYSGFSSPRV
EWKFAHGDITSLVCYNNKITASYEDRVTFSDSGITFHSVTRKDTGMYTCMVSEEGGNTYG
EVTVQLIVLVPPSKPTISVPASATIGTRVVLTCSETDGSPPSEYFWFKDGVLMPTEPKNN
RAFSNSSYSLNHKTGELIFDPVSASDAGDYTCEAQNGYGSPMKSDTVHMDAVELNVGGIV
AAVLVTLILLGVLIFGIWFAYNRGYFDRAKKGTSNKKVIYSQPTARRDGEFRQTSSFLV
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgttggggacgaaggcgaaagtcgggaggaaacagttgcttctcttcacatcgatgatc
ctgtgctcactggcattgggcaggggtgcagtgcaaacttctgaaccagtagtccaagtt
gctgagaataaacctgccaagttgtcctgctcctactccggcttctcctctccccgcgtg
gagtggaagtttgcccatggcgacatcaccagcctcgtttgctataacaacaagatcaca
gcttcctatgaggaccgagttactttttcggacagtggcatcaccttccattctgtgacc
cggaaagacacggggatgtacacttgtatggtctctgaagaaggcggcaacacctatggg
gaagtcactgtccagctcattgtgcttgtgcctccatccaagcctacaatcagtgtcccc
gcctctgctaccatcgggacccgagtggtgctgacctgctcagagacagacggttcccca
ccttctgaatacttttggttcaaggatggggtactgatgcctacggaacccaagaacaac
cgtgctttcagcaactcttcctatagcctgaaccataagacaggggagctgatctttgac
cccgtgtcggcctctgatgctggagattacacttgtgaggcgcagaatgggtatgggtca
cccatgaagtcagacactgtgcacatggatgctgtggagctgaatgtagggggcatcgtg
gcagctgtccttgtaacactcattctccttggagtcttgatttttggcatctggttcgcc
tataaccgaggctactttgacagagcaaagaaagggacctcgaataagaaggtgatttac
agccagcccactgctcgaagagatggggaattcagacagacctcatcattcttggtgtga
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