KEGG   Phocoena sinus (vaquita): 116755715
Entry
116755715         CDS       T07759                                 
Symbol
NEFM
Name
(RefSeq) neurofilament medium polypeptide
  KO
K04573  neurofilament medium polypeptide (neurofilament 3)
Organism
psiu  Phocoena sinus (vaquita)
Pathway
psiu05014  Amyotrophic lateral sclerosis
psiu05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:psiu00001]
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    116755715 (NEFM)
   05022 Pathways of neurodegeneration - multiple diseases
    116755715 (NEFM)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:psiu04812]
    116755715 (NEFM)
Cytoskeleton proteins [BR:psiu04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Type IV
     116755715 (NEFM)
SSDB
Motif
Pfam: Filament Filament_head ATG14 DUF1664
Other DBs
NCBI-GeneID: 116755715
NCBI-ProteinID: XP_032491451
Ensembl: ENSPSNG00000003914
UniProt: A0A8C9BCW0
LinkDB
Position
6:102668358..102672913
AA seq 858 aa
MSYTLDSLGNPSAYRRVTDTRSSFSRVGGSPSSGFRSQSWSRGSPSTVSSSYKRSALAPR
LTYSSAMLSSAESSLDFSQSSSLLNGGSGPGGDYKLSRSNEKEQLQGLNDRFAGYIEKVH
YLEQQNKEIEAEIQALRQKQASHAQLGDAYDQEIRELRATLELVNHEKAQVQLDSDHLEE
DIHRLKERFEEEARLRDDTEAAIRALRKDIEESSLVKVELDKKVQSLQDEVAFLRSNHEE
EVADLLAQIQASHITVERKDYLKTDISSALKEIRSQLECHSDQNMHQAEEWFKCRYAKLT
EAAEQNKEAIRSAKEEIAEYRRQLQSKSIELESVRGTKESLERQLSDIEERHNHDLSSYQ
DTIQQLENELRGTKWEMARHLREYQDLLNVKMALDIEIAAYRKLLEGEETRFSTFAGSIT
GPLYTHRQPSITISSKIQKTKVEAPKLKVQHKFVEEIIEETKVEDEKSEMEEALTAIAEE
LTVSMKEEVKEEEAEEKKEKKEAEEEVVAAKKSPVKATAPELKGEEEEAKEEEEEEEGAK
SDQAEEGGSEKEVSSEKEEGEQEEEGETEAEGEGEEAAEAKEEKKMEAKGEEVAPKEELV
AEAKVEKPEQAKSPVPKSPVEEVKPKAEAAADKGEQKEEEGKVEEAKKEEAKEAPKEEKG
EKKEEKPKDMPEKKKAESPVKEEVVEEVVAKSVKVSLEKDAKEEEKPQQQEKEKEKEKEK
EKAEEVGKKEEGALKDSRKEDIAINGEVEGKDEVEPEAKEKGSGGEEKKGVVTNGLDLSP
ADEKKGGDRGEEKAVVAKMVEKTTSEGGDGATKYITKSVTVTQKVEEHEETFEEKLVSTK
KVEKVTSHAVVKEVTQSD
NT seq 2577 nt   +upstreamnt  +downstreamnt
atgagctacacgctggactcgctgggcaacccgtccgcctaccggcgggtaaccgacacc
cgctcgagcttcagccgcgtcggcggctccccgtccagcggcttccgctcgcagtcatgg
tcccgcggctctcccagcaccgtgtcctcctcctacaagcgcagcgcgctggccccgcgc
ctcacctacagctcggccatgctcagctctgccgagagcagcctcgacttcagccagtcc
tcgtccctgcttaacggcggctctgggccgggcggcgactacaagctgtcccgctccaat
gagaaggagcagctgcaggggctgaacgaccgcttcgcgggctacatcgagaaagtgcac
tacctggagcagcagaacaaggagatcgaggcggagatccaggcgctacggcagaagcag
gcctcgcacgcccagctgggcgacgcgtacgaccaggagatccgcgagctgcgcgccacc
ctggagctggtgaaccacgagaaggctcaggtacagctggactcggaccacctggaagag
gacatccaccggctcaaggagcgcttcgaggaggaggcacggctgcgcgacgacaccgag
gcggccatccgcgcgctgcgcaaagacatcgaagagtcgtcgctggtcaaggtggagctg
gacaagaaggtgcagtcgctgcaggatgaggtggccttcctgcggagcaatcacgaggag
gaggtggccgacctgctggcccagatccaggcgtcacacatcaccgtggagcgcaaagac
tacctgaagacagacatctcgtcggcgctgaaggagatccgctcccagctcgaatgccac
tcggaccagaacatgcaccaggccgaagaatggtttaagtgccgctacgccaagctcacc
gaggcagccgagcagaacaaggaggccatccgttccgccaaggaagagatcgccgagtac
cggcgccaactgcagtccaagagcatcgagctcgagtcggtgcgcggcaccaaggaatcc
ctggagcggcagctcagcgacatcgaggagcggcacaaccacgaccttagcagctaccag
gacaccatccagcagttggaaaatgagcttcggggcacaaagtgggaaatggctcgtcat
ttgagagaataccaggatctcctcaacgtcaagatggctctagatatcgagatagcagca
tacaggaaactcctggagggtgaagagaccagatttagcacatttgcaggaagcatcact
gggccgctgtatacacaccgacaaccctccatcacaatatccagtaagattcagaaaacc
aaggtagaggctcccaagctaaaggtccaacacaaatttgtcgaggagatcatagaggaa
accaaggtggaagatgagaaatcagaaatggaagaagccctgacggccattgcagaggaa
ttgacagtttccatgaaagaagaggtcaaggaagaagaggctgaagaaaagaaagagaaa
aaagaagccgaagaagaagttgtagccgccaaaaagtctccagtgaaagctactgcacct
gaacttaaaggagaggaggaagaggccaaagaggaagaggaggaagaggaaggagctaaa
tcagaccaagctgaggaaggaggatctgagaaggaagtttctagtgaaaaagaggaaggt
gagcaggaagaggaaggagaaacagaggctgaaggtgaaggagaggaagccgccgaagct
aaggaggaaaagaaaatggaggccaagggtgaagaagtggctcccaaggaggagctcgtg
gcagaagccaaggtggagaagccggagcaagccaagtccccggtgccaaagtcaccagtg
gaagaggtgaagcccaaagcagaagctgcagccgacaaaggagaacagaaggaggaggaa
gggaaagtggaggaagcaaagaaggaagaagcaaaggaagctcccaaggaagagaaggga
gagaaaaaggaggagaagccaaaggacatgccagagaagaagaaggctgaatccccagtg
aaggaggaagtcgtggaggaggtggtcgccaaatcagtaaaggtgagcttggagaaggat
gccaaagaggaggaaaagccacagcagcaggagaaggagaaagagaaggagaaggagaag
gagaaagcggaagaggtggggaagaaggaggagggagctttgaaggattccaggaaggaa
gacatagccatcaacggggaggtggaaggaaaagacgaggtagagccggaagctaaggag
aagggcagtgggggagaagagaagaaaggggttgtcaccaatgggctagacttgagccca
gcagatgaaaagaagggtggtgatagaggtgaggagaaagcggtggtggccaaaatggta
gaaaaaaccaccagtgaggggggagatggtgctaccaagtatatcaccaaatctgtaacc
gtcactcaaaaggtcgaagagcacgaagagacctttgaggagaagttagtgtctactaaa
aaggtagagaaggtcacttcacacgccgtagtaaaggaagtcacccagagtgactaa

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