Phocoena sinus (vaquita): 116755721
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Entry
116755721 CDS
T07759
Symbol
RNF20
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1A isoform X1
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psiu04121
]
116755721 (RNF20)
Enzymes [BR:
psiu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116755721 (RNF20)
Ubiquitin system [BR:
psiu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
116755721 (RNF20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE1B
CC_Bre1
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_5
zf-RING_2
zf-RING_UBOX
zf-rbx1
Toxin_SdpC
Motif
Other DBs
NCBI-GeneID:
116755721
NCBI-ProteinID:
XP_032491465
Ensembl:
ENSPSNG00000007983
UniProt:
A0A8C9E1G7
LinkDB
All DBs
Position
6:complement(30726446..30751605)
Genome browser
AA seq
1050 aa
AA seq
DB search
MSGIGNKRAAGEAGTSVPPEKKTAVEDSGTTVETIKLGSVSSTEELDIRTLQAKNRKLAE
MLDQRQAIEDELREHIEKLERRQATDDASLLIVNRYWSQFDENIRIILKRYDLEQGLGDL
LTERKALVVPEPEPDSDSNQERKDDRERGEGQEPAFSFLATLASSSSEEMESQLQERVES
SRRAVSQIVTVYDKLQEKVELLSRKLNSGDNLIVEEAVQELNSFLAQEDMRLQELTDLLQ
EKHCTMSQECRGFPHGAVVESPPADAGDRGSCPGPGRSHMSRSSWAREPWLLSLRVRSLC
SATGEATTVRGPRTTHTKKNSSAKFAKLQSKVETAESRVSVLESMIDDLQWDIDKIRKRE
QRLNRHLVEVLERVNSKGYKVYGAGSSLYGGTITINARKFEEMNAELEENKELAQNRHCE
LEKLRQDFEEVTTQNEKLKVELRSAVEEVVKETPEYRCMQSQFSVLYNESLQLKAHLDEA
RTLLHGTRGTHQRQVELIERDEVSLHKKLRTEVIQLEDTLAQVRKEYEMLRIEFEQTLAA
NEQAGPINREMRHLISSLQNHNHQLKGEVLRYKRKLREAQSDLNKTRLRSGSALLQSQSS
TEDPKDEPAELKQDPEDLSAQSTASKASQEEVNEIKSKRDEEERERERREKERERERERE
KEKEREREKQKLKESEKERDSAKDKEKGKHDDGRKKEAEIIKQLKIELKKAQESQKEMKL
LLDMYRSAPKEQRDKVQLMAAEKKSKGELEDLRQRLKDLEDKEKKENKKMADEDALRKIR
AVEEQIEYLQKKLAMAKQEEEALLSEMDVTGQAFEDMQEQNIRLMQQLREKDDANFKLMS
ERIKSNQIHKLLKEEKEELADQVLTLKTQVDAQLQVVRKLEEKEHLLQSNIGTGEKELGL
RTQALEMNKRKAMEAAQLADDLKAQLELAQKKLHDFQDEIVENSVTKEKDMFNFKRAQED
ISRLRRKLETTKKPDNVPKCDEILMEEIKDYKARLTCPCCNMRKKDAVLTKCFHVFCFEC
VKTRYDTRQRKCPKCNAAFGANDFHRIYIG
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggaattggaaataaaagagcagctggagaggctggcacatctgtgcctccggag
aagaagacagctgttgaagactcagggaccacggtggaaacaattaagctcgggagtgtc
tcttcaacggaggagttagacattcgaacactgcaagccaaaaatcgcaaactggcagaa
atgctggatcaacggcaagccattgaagatgagctccgtgagcacattgaaaaactggaa
cgaagacaggccaccgatgatgcctcactattgatcgtcaaccggtactggagtcagttt
gatgaaaacatccgtatcatccttaaacgttatgatctggagcagggtttgggagaccta
ctcacagaaagaaaagcccttgttgtgcctgagccggaaccagactctgatagcaatcag
gagcggaaagatgaccgagagagaggggaagggcaagagccagctttctctttccttgct
actttggccagcagttccagtgaagagatggaatctcagctgcaggagcgcgtggagtcc
tcccgccgagctgtgtcgcagattgtgactgtctatgataaactgcaagaaaaagtggag
ctcttatcacggaagctgaacagtggagataatctgatagtggaggaagcagtgcaggag
ctgaattccttccttgcacaagaggacatgaggctacaagaattgacagacctccttcag
gagaagcattgcaccatgtctcaggagtgccggggcttccctcatggcgcagtggttgag
agtccacctgctgatgcaggggacaggggttcatgccccggtccaggaagatcccacatg
tcgcggagcagctgggcccgtgagccatggctgctgagcctgcgtgtccggagcctgtgc
tccgcaacgggagaggccacaacagtgagaggcccgcgtaccacacacacaaaaaaaaac
tccagtgccaagttcgccaagttgcagagtaaagtggagacagctgagtcacgagtatct
gtcctggagtccatgattgatgacctgcagtgggatattgacaaaattcgaaagagggaa
cagcgactcaatcgacacttagtagaagtcctagaacgggtgaattcaaaaggttataaa
gtatacggtgcagggagcagtctctatggcggcacaatcactatcaatgcccggaagttt
gaggaaatgaacgcagaacttgaggagaacaaagagttggctcagaaccgtcactgtgag
ctggagaaacttcggcaagactttgaggaggtcactacgcaaaatgaaaagctgaaggtg
gaattacggagtgctgtggaggaagtggtcaaggagactccagaatatcgctgcatgcag
tcacagttctctgtcctgtacaacgagagcctgcagttgaaagcccacttggatgaggct
cggaccctacttcatggcaccaggggtacccaccaacgccaagttgagctcattgagcga
gatgaggttagtcttcataagaagctgaggaccgaagtgatccagctagaagatacactg
gcccaggtccgcaaggagtatgaaatgctgaggatagaatttgagcagacccttgctgcc
aatgaacaagcaggccccataaaccgggagatgcgccacctcatcagtagcctccagaat
cacaatcaccagctgaaaggggaggtcctaaggtataagcggaaactgagagaagcccag
tctgacctgaacaagacacggctgcgcagtggcagtgccctcttgcagtctcagtccagt
actgaggaccctaaggacgagcctgcagagctaaaacaagatcctgaggacttgtctgcc
cagtccaccgcatcgaaggcatctcaggaggaagtcaacgaaattaagtccaaacgcgat
gaggaagagcgagaacgagaaaggagggagaaagagagggagcgagaaagagagcgggag
aaggaaaaggagagagaacgagagaaacagaaactaaaagagtcagaaaaagagagagat
tctgctaaggataaagagaaagggaaacatgatgatggaaggaagaaggaagcagaaatt
atcaaacaattgaagattgaactcaagaaggcacaggagagccaaaaggagatgaaacta
ttgctagatatgtaccgctctgccccaaaggaacagagagacaaggttcagctaatggca
gctgaaaagaagtctaagggagagttggaagatttaaggcaaagactcaaagatctggag
gataaggagaaaaaagagaacaagaaaatggctgacgaagatgccctgaggaagatccgg
gcagtagaggagcagatagaatacctgcagaagaagctggccatggccaagcaggaggaa
gaagctctcctctctgagatggacgtcacaggccaggcctttgaagacatgcaggagcaa
aatatccgtttgatgcagcagttgagggagaaggatgatgcaaatttcaagctcatgtca
gaacgtatcaagtccaatcagatccataagctgctgaaagaagagaaggaggagctggca
gaccaggttttgactctgaagactcaggttgatgcccagttacaggtagtgaggaaactg
gaagagaaggagcatctgttacaaagcaacattggcacaggggagaaggagctgggtctt
aggacccaagccttagagatgaataaacgcaaggcaatggaggcagcccagcttgcagat
gacctcaaagcacagttggagttggctcagaagaagctacatgattttcaggatgagatt
gtggagaacagcgtcaccaaagaaaaagatatgttcaatttcaaacgggcccaggaggac
atctctagacttcgaaggaagctggagaccacaaagaaaccagacaatgtacccaaatgt
gatgagattctgatggaggagattaaggattacaaggcacgcctgacctgtccatgttgc
aacatgcgtaaaaaggatgctgtacttaccaagtgttttcatgttttctgctttgagtgt
gtgaagacccgctatgacacccgccagcgcaaatgtcccaagtgtaatgctgcttttggt
gccaatgatttccatcgcatctacattggttga
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