Phocoena sinus (vaquita): 116755743
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Entry
116755743 CDS
T07759
Symbol
LINGO2
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psiu04131
]
116755743 (LINGO2)
Membrane trafficking [BR:
psiu04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
116755743 (LINGO2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_1
ig
Ig_2
LRRNT
V-set
LRR_9
Ig_C17orf99
LRR_LRWD1
Sp38
Ig_6
C2-set_3
Motif
Other DBs
NCBI-GeneID:
116755743
NCBI-ProteinID:
XP_032491502
Ensembl:
ENSPSNG00000002038
UniProt:
A0A8C9B3A0
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Position
6:complement(76455203..76457203)
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AA seq
606 aa
AA seq
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MLHTALSCWQPFLGLAVVLIFMGSTIGCPARCECSAQNKSVSCHRRRLIAIPEGIPIETK
ILDLSKNRLKSVNPEEFISYPLLEEIDLSDNIIANVEPGAFNNLFNLRSLRLKGNRLKLV
PLGVFTGLANLTKLDISENKIVILLDYMFQDLHNLKSLEVGDNDLVYISHRAFSGLLSLE
QLTLEKCNLTAVPTEALSHLRSLISLHLKHLSINNMPVYAFKRLFHLKHLEIDYWPLLDM
MPANSLYGLNLTSLSITNTNLSVVPFLAFKHLVYLTHLNLSYNPISTIEAGMFSDLIRLQ
ELHIVGAQLRTIEPHSFQGLRFLRVLNVSQNLLETLEENVFSSPRALEVLSINNNPLACD
CRLLWILQRHPTLQFGGQQPMCAGPDTIRERSFKDFHSTALSFYFTCKKPKIRERKLQHL
LVDEGQTVQLECNADGDPQPVISWVTPRRRFITAKSNGRATVLGDGTLEIRFAQDQDSGM
YVCIASNAAGNDTFTASLTVKGFTSDRFLYANRTPMYMTDSNDTVSNGTNANTFSLDLKT
ILVSTAMGCFTFLGVVLFCFLLLFVWSRGKGKHKNSIDLEYVPRKNNGAVVEGEVAGPRR
FNMKMI
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgcttcacacggccttatcatgttggcagccattcctgggtctggctgtggtcttaatc
ttcatgggatccaccattggctgccctgctcgctgcgagtgctcagcccagaacaaatct
gttagctgccaccgaaggagattgatcgccatcccagagggcattcccatcgagaccaaa
atcttggacctcagcaagaacaggctgaaaagtgtcaaccctgaagaattcatctcatac
cctctgctggaggagatagacttgagtgacaacatcatcgccaatgtggagccaggagca
tttaacaacctcttcaacctgcgttccctccgcctgaagggcaatcgcctgaagttggtc
cctctgggggtcttcacgggcctcgccaacctcaccaagcttgacattagtgaaaataag
attgtcattttactggactacatgttccaggatttgcataacctgaagtctctagaagtg
ggggataatgatttggtttatatatcacatagggccttcagtgggctgcttagcttggag
cagctcaccctggagaaatgcaacctaacagcggtaccaacagaagccctctcccatctc
cgcagcctcatcagcctgcatctgaagcatctcagtatcaacaacatgcccgtgtatgcc
tttaaaagactgttccacctgaaacatctagagattgactattggcctttactggatatg
atgcctgccaatagcctctatggtctcaacctcacatccctctcaatcacgaacaccaac
ctgtccgttgtacccttccttgcctttaaacacctggtctatctgacccaccttaacctc
tcctacaatcccatcagcactatcgaagcaggcatgttctcggacctgatccgccttcag
gagcttcatatagtgggggcccagctccgcaccattgagcctcactccttccaagggctc
cgcttccttcgtgtgctcaatgtgtctcagaacctactggaaactttggaagagaatgtc
ttctcctcccctagggctttggaggtcctgagcattaataacaacccactggcctgtgac
tgccgccttctctggatcctgcagcgtcaccccaccctgcagttcggtggccagcagccc
atgtgtgctggcccagacaccattcgtgagaggtcattcaaggatttccacagcactgcc
ctttctttttactttacctgcaaaaaacccaaaatccgtgaaaggaagttgcagcatctg
ctagtggatgaggggcagacggtccagctagaatgcaatgcagatggagacccacagcct
gtgatttcctgggtgacacctcgaaggcgtttcatcaccgccaagtccaatggaagagcc
actgtgttgggcgatggcaccttggaaatccgttttgcccaggatcaggatagcgggatg
tatgtttgcatcgctagcaacgccgctgggaatgacaccttcacagcctccttaactgtg
aaaggattcacttcagaccgcttcctttatgcaaacaggacccctatgtacatgaccgac
tccaatgacaccgtttccaatggcaccaatgccaatactttttccctggaccttaaaacc
atactggtgtctacagccatgggctgtttcacattcctgggagtggtcttattttgtttt
ctcctcctttttgtgtggagccgagggaaaggcaaacacaaaaacagcattgaccttgag
tatgtaccccgaaaaaacaatggtgctgttgtggaaggggaggtggctggacccaggagg
ttcaacatgaaaatgatttga
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