KEGG   Phocoena sinus (vaquita): 116755747
Entry
116755747         CDS       T07759                                 
Symbol
NVL
Name
(RefSeq) nuclear valosin-containing protein-like isoform X1
  KO
K14571  ribosome biogenesis ATPase
Organism
psiu  Phocoena sinus (vaquita)
Pathway
psiu03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:psiu00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    116755747 (NVL)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:psiu03009]
    116755747 (NVL)
Ribosome biogenesis [BR:psiu03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    116755747 (NVL)
SSDB
Motif
Pfam: AAA Nucleolin_bd AAA_lid_3 RuvB_N AAA_16 AAA_5 AAA_14 AAA_22 TIP49 AAA_2 AAA_28 AAA_33 nSTAND3 NPHP3_N Mg_chelatase RNA_helicase AAA_18 AAA_17 ABC_tran Zeta_toxin NACHT nSTAND_NTPase5 AAA_3 IstB_IS21 Rad17 NB-ARC TsaE Vps4_C Viral_helicase1 ATPase Sigma54_activat Parvo_NS1 Sigma54_activ_2 DUF3540 DUF4473
Other DBs
NCBI-GeneID: 116755747
NCBI-ProteinID: XP_032491523
Ensembl: ENSPSNG00000000479
LinkDB
Position
1:164036789..164140588
AA seq 856 aa
MKPRPARFVDNKLKQRVIQYLTSNRCGKYVDTGVLASDLQRMYSIDYGRRKRNAFRIQVE
KVFSIISSEKELKDLPELEDEHLAKRARHGEEDNEYNESYSDDDSNMEDYPDPQSANQMN
SSLLSLYRKGNPDSVSSTPDMERRETTISTPRITSKTGSIPLRSPARGSEGGWFIDKIPG
GKKDSFFSDLSDEKSNDKKPISEIENSKDSSLLESNKKRKGRLNSKRGKRKKEDLQEVDG
EIEAVLQKKAKARGLELQISKVKFEDVGGNDTTLKEVCKMLIHMRHPEVYHHLGVIPPRG
VLLHGPPGCGKTLLAHAIAGELDLPILKVAATEIVSGVSGESEQKLRELFEQAVSNAPCI
LFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNDMAATARVLVIGATNRPDSLDPAL
RRAGRFDREICLGIPDEASRERILQTLCRKVRLAETFHFRHLAHLTPGFVGADLMALCRE
AAMCAVNRVLMKLQEQQQKNPEIEGLPSEGGQEERIGPEPTSKTQDELQRLLGLLRNQDP
LSEEQLQGLCLELNDFIVALSSVQPSAKREGFVTVPNVTWADIGALEDIREELTMAILAP
VRNPDQFKALGLETPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESE
RAVRQVFQRAKNSAPCVIFFDEVDALCPRRSVRETGASVRVVNQLLTEMDGLETRQQVFI
MAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTKPPLDADVNLEAVA
GDLRCDCYTGADLSALVREASICALKQEMARQKSGSEKGELKISHKHFEEAFKKVKSSVS
KEDQAMYEALQWSLSR
NT seq 2571 nt   +upstreamnt  +downstreamnt
atgaagcccaggcccgcgaggtttgtggataataagctgaagcagcgcgtcatccagtac
ctcaccagtaaccgatgtggcaaatatgtggacactggagtcttagcatccgatttacaa
agaatgtacagtatagactatggtcgaagaaaaagaaatgcttttaggattcaggtagaa
aaagtatttagcataattagtagtgagaaggaacttaaggatctaccagaattagaagat
gaacatctggctaaaagagcaagacacggtgaagaggataatgagtataatgaaagctat
tctgatgatgattcaaatatggaagattacccagatccacagtcagcaaatcagatgaac
agttccctgctctccttatatcggaaaggaaatcctgattctgtttcaagtactcctgac
atggagcgaagagaaaccacgatttcaacaccacggataacttccaaaacaggctccatt
cctttgaggtcccctgccagaggttctgaaggaggatggtttattgacaaaatcccgggt
gggaagaaagacagttttttctcagacctatcagatgagaaaagtaatgataagaagccg
atctctgagatagagaattcaaaagattcttctcttctggagagtaataaaaaaagaaaa
ggcaggctaaacagcaaaagaggcaaaaggaagaaagaagatcttcaggaagtagatgga
gaaatagaggctgtcctgcaaaagaaagctaaagccagagggctagaattacagatctcc
aaggtgaagtttgaagatgttggaggcaatgatacgacattaaaagaggtctgcaagatg
ctcatacacatgcgtcacccagaggtgtaccaccacctgggcgtcatacccccacgcgga
gttcttcttcatggaccacctggctgtgggaagacgttgcttgcccatgcaattgctggg
gaacttgaccttccaatattgaaagtagctgctacagagattgtatctggagtatctgga
gaatcggaacagaagctgagagagctatttgaacaagctgtgtcaaatgcaccatgtatc
ctttttattgatgaaattgatgctattacccccaaaagagaagttgcttcaaaagatatg
gaacgaagaattgtagcccagctcctaacctgcatggacgatctgaatgacatggccgct
acagctcgggtcctagtcatcggagctactaaccgaccagactccttagaccctgctttg
agacgtgcaggaaggttcgaccgagagatatgcctaggtatcccagatgaagcatccagg
gaaagaatacttcaaactttgtgcagaaaagtaagacttgccgaaacttttcattttcgt
cacttagcacacctaacaccgggctttgttggtgctgacctgatggcactctgccgagag
gcagccatgtgtgcagtcaacagggtcttaatgaagctgcaggagcagcagcagaagaat
cctgagattgaaggtttgccctctgaaggaggccaggaagaaaggattggacctgaaccc
acttctaaaacacaggatgaattgcaaaggctcttggggttgctgaggaaccaagatccc
ctctcagaggagcagctgcaagggctgtgccttgagttgaatgatttcattgttgctcta
tcctctgtccaaccctctgctaaaagggaaggctttgtcactgtccctaatgtgacatgg
gcggatattggtgccctggaagacattagagaggagctcaccatggcaatattggcaccg
gtacgtaacccagatcagttcaaagctcttgggttggagactccagctggagtcctcctt
gctggtccccctggctgtgggaaaactctgctggcaaaggctgttgcaaatgagtctggg
ttaaattttatatctgtcaaggggcctgagttactaaatatgtatgttggtgaaagcgag
cgtgctgtgcgacaggtttttcagcgagccaagaattcagcaccctgcgtgatattcttt
gatgaagtggatgccttatgtcctcgaagatcagtccgagagacaggggcaagtgtccgg
gtggtaaatcagctacttacagagatggatggtctggaaacacgtcagcaggtttttatt
atggcagccactaacagaccagatatcattgaccctgcaatcctgcgcccaggccgcctg
gacaaaacactctttgtgggtttgccacccccagcagatcgtctcgccatcttaaaaact
atcacaaaaaatggcaccaaacccccactggatgcagatgtaaatttggaagcagttgct
ggtgaccttcgctgtgattgctatacgggtgcagatctctctgctttggtacgggaggct
tctatctgtgccttgaagcaggaaatggcaagacagaagagtgggagtgaaaaaggtgaa
ctcaagattagtcacaagcactttgaagaagctttcaagaaagtaaagtcatctgtatca
aaagaggatcaagcgatgtatgaagctctgcagtggtccctcagccggtga

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