Phocoena sinus (vaquita): 116755775
Help
Entry
116755775 CDS
T07759
Symbol
SPTLC1
Name
(RefSeq) serine palmitoyltransferase 1
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu00600
Sphingolipid metabolism
psiu01100
Metabolic pathways
psiu04071
Sphingolipid signaling pathway
Module
psiu_M00094
Ceramide biosynthesis
psiu_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
116755775 (SPTLC1)
09130 Environmental Information Processing
09132 Signal transduction
04071 Sphingolipid signaling pathway
116755775 (SPTLC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
psiu01007
]
116755775 (SPTLC1)
Enzymes [BR:
psiu01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
116755775 (SPTLC1)
Amino acid related enzymes [BR:
psiu01007
]
Aminotransferase (transaminase)
Class II
116755775 (SPTLC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-GeneID:
116755775
NCBI-ProteinID:
XP_032491581
Ensembl:
ENSPSNG00000001133
UniProt:
A0A8C9AX21
LinkDB
All DBs
Position
6:complement(96303644..96377690)
Genome browser
AA seq
473 aa
AA seq
DB search
MATVAEQWVLVEMVQALYEAPAYHLILEGILILWIIRLLFSKTYKLQERSDLTVKEKEEL
IEEWQPEPLVPPVSKDHPALNYNIVSGPPSHNIVVNGKECINFASFNFLGLLDNPRLKAA
ALASLKKYGVGTCGPRGFYGTFDVHLDLEDRLAKFMKTEEAIIYSYGFATIASAIPAYSK
RGDIVFVDKAACFAIQKGLQASRSDIKLFNHNDMDDLDRLLKEQEIEDQKNPRKARVTRR
FIVVEGLYMNTGTICPLPELVKLKYKYKARIFLEESLSFGVLGEHGRGVTEHFGIDIDDI
DLISANMENSLASIGGFCCGRSFVIDHQRLSGQGYCFSASLPPLLAAAAIEALNIMEENP
DIFAVLKEKCKRIHNALQGISGLKVVGESISPAFHLQLEESTGCRERDVKLLQEIVTQCM
DRGIALTQARYLEKEEKYLPPPSIRVVVTVEQTEEELEKAATTISKVAQTVLL
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggtcgcggagcagtgggtgctggtggagatggtacaggcgctctacgaggct
cctgcttatcatcttattttggaaggaattttaatactctggataatcagacttcttttc
tctaaaacttacaagttacaagaacgatctgatcttacagtcaaggaaaaggaagaattg
attgaagagtggcaaccagaacctcttgttcctcctgtctcaaaagaccatcctgctctc
aactacaacatcgtttcaggccctccaagccataacattgtggtgaatggaaaagaatgt
ataaactttgcctcattcaattttcttggattgttggataaccctaggctcaaggcagca
gctttggcatctctaaagaagtatggtgtgggaacttgtggacctagaggattttatggc
acatttgatgtgcacttggatttggaagaccgcctggcaaaatttatgaagacagaagaa
gccattatatactcatatgggtttgccaccatagccagtgctattcctgcttactctaag
agaggggacattgtgtttgtagataaagctgcctgctttgctattcagaagggattacag
gcatcacgtagtgacattaagctgtttaaccataatgatatggatgacctggatcgactg
ttgaaggaacaagaaattgaagatcaaaagaatcctcgcaaggctcgtgtaactcgacgt
ttcattgtagtcgaagggttgtatatgaatactggaactatttgccctcttccagaattg
gttaagttaaaatacaaatataaagcaaggatctttctggaggaaagcctttcgtttgga
gtcctgggggagcatggccgaggagtcactgaacattttggaatcgatattgatgatatt
gatcttatcagtgccaacatggagaattcacttgcttctattgggggtttctgctgtggc
aggtctttcgtaattgaccatcagcgactttccggccagggatactgcttttcagcttca
ttacctcccctcttagctgctgctgcaattgaggccctcaacatcatggaagaaaatcca
gatatttttgcagtgttgaaggaaaagtgcaaacgaattcataacgctttacaaggcatt
tctggattaaaggtggtgggtgagtccatttctccagcatttcacctccagctggaagag
agcactgggtgtcgagaaagagatgttaaactacttcaggaaatagtaactcaatgcatg
gacagaggcatcgcgttaactcaggcgcgctacctggagaaagaagagaagtatctccct
cctccaagcattagggttgtggtcacagtggaacaaacagaagaggaactagagaaagct
gcgaccacaatcagcaaggtggcccagaccgtgctgctttag
DBGET
integrated database retrieval system