Phocoena sinus (vaquita): 116755798
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Entry
116755798 CDS
T07759
Symbol
SMC2
Name
(RefSeq) structural maintenance of chromosomes protein 2 isoform X1
KO
K06674
structural maintenance of chromosome 2
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psiu03036
]
116755798 (SMC2)
Chromosome and associated proteins [BR:
psiu03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
116755798 (SMC2)
Condensin II
116755798 (SMC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
BRE1
Motif
Other DBs
NCBI-GeneID:
116755798
NCBI-ProteinID:
XP_032491626
Ensembl:
ENSPSNG00000007798
UniProt:
A0A8C9BQQ1
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All DBs
Position
6:complement(28761242..28813899)
Genome browser
AA seq
1191 aa
AA seq
DB search
MHIKSIILEGFKSYAQRTEVNGFDPLFNAITGLNGSGKSNILDSICFLLGISNLSQVRAS
NLQDLVYKNGQAGITKASVSITFDNSDKKQSPLGFEIHDEITVTRQVVIGGRNKYLINGV
NANNTRVQDLFCSVGLNVNNPHFLIMQGRITKVLNMKPPEILSMIEEAAGTRMYEYKKIA
AQKTIEKKEAKLKEIKMILEEEITPTIQKLKEERSSYLEYQKLMREIEHLSRLYIAYQFL
LAEDTKERSAEELKEMQDKIVKLQEELSENDKKIKALSHEIEELEKRKDKEIGGILRSLE
DALAEAQRVNTKSQSAFDFKKKNLASEENKRKELEKNMVEDSKTLAAKEKEVKKMTDGLS
ALQEASNKDAEALAAAQQHFNAVSAGLSSNEDGAEATLAGQMMACKNDISKVQTEAKQAQ
MKLKHAQQELETKQTEIKKMDGGYRKDQEALEAVKKLREKLEAEMKKLNYEENKEECLLE
RHRQLSRDISRLKETYEALLARFPNLRFAYRDPEKNWNRNCVKGLVASLFSVKDTSATTA
LELVAGDRLYNVVVDTEVTGKKLLEKGELKRRYTIIPLNKISARCIAPETLRVAQNLVGP
NNVHVALSLVEYKPELQKAMEFVFGTTFVCDNMDNAKKVAFDKRIMTRTVTLGGDVFDPH
GTLSGGARSQAASILTKFQELKHVQDELRIKENELRALEEELAGLKNTAEKYRQLKQQWE
MKTEEADLLQTKLQQSSYHKQQEELDALKKIIEESEETLKNTKEIQKKAEEKYEVLENKM
KNAEAERERELKDAQKKLDCAKTKADASTKKMKEKQQEVEAITLELEELKREHASNEQQL
EAVNEAIKSYEGQIAVMAAEVAKNKELVNKAQEEVTKQKEVITAQDSIVKAKYAEVAKHK
EQNNESQLKIKELDHNISKHKREAEDAAAKVSKMLKDYDWINAEKHLFGQPNSTYDFKTN
NPKEAGQRLQKLQEMKEKLGRNVNMRAMNVLTEAEERYNDLMKKKRIVENDKSKILATIE
DLDQKKNQALNIAWQKVNKDFGSIFSTLLPGANAMLAPPEGQNVLDGLEFKVALGNTWKE
NLTELSGGQRSLVALSLILSMLLFKPAPIYILDEVDAALDLSHTQNIGQMLRTHFTHSQF
IVVSLKEGMFNNANVLFKTKFVDGVSTVARFTQCQNGKVPKETKSKAKGPK
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atgcacattaagtcaatcattcttgagggattcaagtcctatgctcagaggactgaagtc
aatggttttgaccccctcttcaatgctatcactggtttaaatggtagtgggaaatccaac
atattggactccatctgctttttgctgggcatctccaacctgtctcaggttcgggcttct
aatttacaagatttagtttacaaaaatgggcaggctggtattaccaaagcctccgtgtca
atcacctttgataattctgacaaaaagcagagtcctttaggatttgagattcatgatgaa
attacagtaacaaggcaggtggttattggtggcagaaataaatatttaatcaatggagta
aatgcaaacaataccagagtacaggatctcttttgttctgttggccttaatgttaacaac
cctcactttctcatcatgcagggccgaattacaaaagtgttgaatatgaaacctccagag
attttgtccatgatagaagaagcagctggaaccaggatgtatgaatacaaaaagatagct
gcccagaagactatagaaaaaaaggaggctaagctgaaagaaattaagatgatacttgaa
gaagaaattactccaaccattcagaaattaaaagaggaaagatcttcctacttggagtac
caaaagctaatgagagaaatagaacatttgagtcgtttatatattgcttatcagtttttg
ctggctgaagataccaaagaacgctcagctgaggagttaaaagaaatgcaggataaaatt
gtgaagcttcaagaagaattgtctgaaaatgataaaaaaataaaagcacttagtcatgaa
atagaagagttggaaaaaagaaaagataaggaaattggaggtatactccgatctttagaa
gatgctcttgcagaagctcagcgagttaatactaaatctcagagtgcctttgatttcaag
aagaaaaatctggcaagtgaagagaacaaacgcaaagagctggaaaaaaatatggtagag
gattctaaaactttagcagcaaaggaaaaagaggttaaaaagatgacagatgggctgagt
gcccttcaagaagcaagtaataaagatgctgaagccttggctgctgcacagcagcacttc
aatgctgtttccgccggcctgtccagtaatgaagatggagcagaagcaactcttgctggt
caaatgatggcctgtaaaaatgacataagtaaagttcagacagaagccaaacaggctcag
atgaagttgaaacatgcccaacaagaattagagactaaacaaacagaaattaagaagatg
gatggtggctataggaaggatcaagaagctttagaagctgtgaagaaacttagagaaaaa
cttgaagccgaaatgaaaaagctaaattatgaagaaaacaaggaggaatgccttctggaa
aggcacaggcagctatctcgtgatatcagtagattgaaagaaacatatgaagctctcttg
gccagatttcccaatcttcgatttgcctacagggatccagagaagaactggaatagaaat
tgtgtgaaaggacttgtagcttcactgtttagtgtgaaagatacttctgcaaccacagct
ttagaattggtggctggggaccgactctacaatgttgtagtagacacagaggttactgga
aaaaagctactagaaaagggggaattgaagcgtagatacactataattccactcaataaa
atttcagccagatgtattgctccagaaactctgagggttgctcagaatcttgttggccct
aataatgttcatgtggctctttccctggttgaatacaaaccagaacttcagaaagcaatg
gaatttgtctttggaacaacatttgtttgtgacaatatggataatgcaaaaaaggtagct
ttcgataaaaggataatgactagaaccgtaactctaggaggtgatgtatttgatcctcac
gggacgttgagtggaggtgctcgatcccaggcagcttctattttaaccaagtttcaagaa
ctcaaacatgttcaagatgagctgagaatcaaggagaatgagctacgggctctagaagag
gaattagcaggtcttaaaaacactgctgaaaagtatcgccaactaaaacagcagtgggag
atgaaaactgaggaggcagatttattacaaaccaagcttcagcaaagctcatatcacaag
caacaggaagaattagatgctcttaaaaaaatcattgaggaaagtgaggagaccttaaaa
aacaccaaagaaattcaaaaaaaagcagaagaaaaatatgaagtattggagaataaaatg
aaaaacgcagaagctgaaagagagagagaactgaaggatgcacagaaaaaactagattgt
gccaaaactaaagcagatgcttctaccaagaaaatgaaagaaaaacaacaggaagttgaa
gctatcaccctggagctagaagagctcaagagagagcatgcatccaatgaacaacagctt
gaagctgtaaatgaagctatcaaatcctatgaaggtcagattgcagtaatggcagctgag
gtggctaaaaataaggagttagtaaataaagctcaagaagaggtgaccaagcaaaaagaa
gtgataacagcccaagacagcatagttaaagctaaatatgcagaagtagcaaaacataag
gagcaaaacaatgaatctcagcttaaaattaaggaactggaccacaacatcagcaaacat
aaacgggaagctgaagatgctgctgcaaaggtgtccaaaatgttgaaagattatgactgg
attaatgcagagaaacacctctttgggcaacccaatagcacctatgatttcaaaactaac
aacccaaaagaagctggccagagacttcagaagttgcaagaaatgaaggagaaactagga
agaaatgtcaatatgagagctatgaatgtactgacagaagctgaagagcggtataatgac
ttgatgaagaagaagagaattgtagaaaatgacaaatccaaaatccttgcaactatagaa
gaccttgaccagaagaaaaaccaagccctaaatattgcttggcaaaaggtgaacaaggac
tttggatctattttttccactcttttgcccggtgctaatgctatgcttgcaccaccagaa
gggcaaaatgtattggatggtctggagtttaaggttgccttaggaaatacttggaaagaa
aacctaactgaacttagtggtggtcagaggtctttagtggctttgtcattaatactgtcc
atgctcctcttcaaacctgccccaatttacatcctggatgaggtagatgcagccttggat
ctttctcatactcagaatattggacagatgctacgtactcatttcacacattctcagttc
attgtggtgtccctaaaggaaggtatgttcaacaatgcaaacgtccttttcaaaaccaag
tttgtggatggtgtttctacagtagccagatttactcagtgtcaaaatggaaaagttcca
aaggaaaccaaatccaaggcaaaaggacccaaatga
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