Phocoena sinus (vaquita): 116755839
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Entry
116755839 CDS
T07759
Symbol
ELP3
Name
(RefSeq) elongator complex protein 3 isoform X1
KO
K07739
elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:
2.3.1.311
]
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psiu03016
]
116755839 (ELP3)
Enzymes [BR:
psiu01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.311 tRNA carboxymethyluridine synthase
116755839 (ELP3)
Transfer RNA biogenesis [BR:
psiu03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
116755839 (ELP3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ELP3_N
Radical_SAM_C
Radical_SAM
Acetyltransf_10
Acetyltransf_7
Acetyltransf_1
Motif
Other DBs
NCBI-GeneID:
116755839
NCBI-ProteinID:
XP_032491731
Ensembl:
ENSPSNG00000012827
LinkDB
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Position
6:105381663..105492617
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AA seq
548 aa
AA seq
DB search
MRQKRKGDLSPAELMMLTIGDVIKQLIEAHEQGKDIDLNKVKTRTAAKYGLSAQPRLVDI
IAAVPPQYRKVLVPKLKAKPIRTASGIAVVAVMCKPHRCPHISFTGNICVYCPGGPDSDF
EYSTQSYTGYEPTSMRAIRARYDPYLQTRHRIEQLKQLGHSVDKVEFIVMGGTFMALPEE
YRDYFIRNLHDALSGHTSNNIYEAVKYSERSLTKCIGITIETRPDYCMKRHLSDMLTYGC
TRLEIGVQSVYEDVARDTNRGHTVKAVCESFHLAKDSGFKVVAHMMPDLPNVGLERDIEQ
FTVSFFENPAFRPDGLKLYPTLVIRGTGLYELWKSGRYKSYSPSDLIELVARILALVPPW
TRVYRVQRDIPMPLVSSGVEHGNLRELAFARMKDLGIQCRDVRTREVGIQEIHHKVRPYQ
VELVRRDYVANGGWETFLSYEDPDQDILIGLLRLRKCSEETFRFELVGGVSIVRELHVYG
SVVPVSSRDPTKFQHQGFGMLLMEEAERIAREEHGSGKIAVISGVGTRNYYRKIGYRLQG
PYMVKNLK
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgaggcagaagcggaaaggagatctcagccctgctgagctgatgatgctgaccatagga
gatgttattaaacaactaattgaagcccacgaacaggggaaagacatcgatctaaataag
gtgaaaaccaggacagctgccaaatatggcctttcagcacagccccgcctggtggatatc
attgctgcagtcccacctcagtatcgaaaggtcttggtccccaagttaaaggcaaaaccc
atcagaactgccagtgggattgctgttgtggctgtcatgtgcaaaccccacagatgtcca
cacatcagttttacaggaaacatatgtgtatactgccctggtggacctgattcagacttt
gaatattcgacccagtcttatactggatatgagccaacctccatgcgagctatccgtgct
aggtatgacccttatctacagacaagacaccgaatagaacagttaaaacaacttggtcac
agtgtggataaagtggaatttattgtgatgggtggaacatttatggcccttccagaagaa
tacagagattattttattcgaaatttacatgatgccttatcaggacatacctccaacaat
atttacgaggcagtcaagtattctgagagaagcctcacaaagtgcatcggaattactatt
gagaccagaccagattattgcatgaagcggcatttaagtgatatgttgacttatggctgc
acaaggctggagattggggtgcagagtgtctatgaggatgtggccagagataccaaccgg
ggccacactgtgaaggcggtatgtgagtcctttcacctggccaaagattctggtttcaaa
gttgtggctcatatgatgcccgatctgccaaatgtgggactagagagagacattgaacag
tttacagtaagtttttttgagaaccctgcttttcgtcctgatggtttgaaactctaccct
accctggtgattcgtggaactgggctttatgagctgtggaaatcgggaagatacaagagt
tattctcccagtgacctgattgaattggtggcccggatccttgccctcgtgcctccgtgg
actcgagtgtaccgagtgcagagagatattccaatgcccttagtcagctcaggagtagag
catggtaacttgagagagctggcattcgcaagaatgaaagaccttggaatacagtgtcga
gatgtgagaaccagagaggttggaatccaagaaattcatcacaaagtgcgtccataccag
gttgaattggtaagaagagattatgttgcaaatggtggctgggagacattcttatcctat
gaagaccccgatcaagacattttgattggcctcctgagattacggaagtgctcagaggag
acattccgtttcgaattggtcggcggggtgtccatagtccgagagctgcatgtgtatgga
agtgtcgtccccgtcagcagtcgggatcccactaaatttcagcatcagggatttggcatg
ctactgatggaggaagcagaaagaatagctagagaagaacatggatctgggaaaatagct
gttatatcaggggttggcaccaggaattattacagaaagattggctacagattgcaaggt
ccgtacatggtaaaaaatctaaaataa
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