Phocoena sinus (vaquita): 116755885
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Entry
116755885 CDS
T07759
Symbol
TTF1
Name
(RefSeq) transcription termination factor 1 isoform X1
KO
K15225
transcription termination factor 1
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04918
Thyroid hormone synthesis
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09150 Organismal Systems
09152 Endocrine system
04918 Thyroid hormone synthesis
116755885 (TTF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psiu03021
]
116755885 (TTF1)
Transcription machinery [BR:
psiu03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription termination factors
116755885 (TTF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-bind_6
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
116755885
NCBI-ProteinID:
XP_032491797
Ensembl:
ENSPSNG00000010461
LinkDB
All DBs
Position
6:4209131..4234273
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AA seq
759 aa
AA seq
DB search
MEGESSRLETHTPVFVKKKTKHSVHKKRHGRHPHESFRGSSLSNEQAHITKGKKKRKDAQ
HLVSSPLKKSEICDETEKAASIPKKSKKRRKGALGVDKETGVACVLVNKENIENTPKNFT
KNVDVVYIDVSKERKSTKGPEADEPHLVTKSHELHDKVREKKQRKHRRKVSSCDAVQESL
GASITLPGSESQEQEPQPPMGQEGEIAQLPVSADQSKSKKRKRKRPSDQEFEALPAPESA
ENIYSEGSQLIGEVGTAGGNQESSGLKKKSKKRKRRSSVDTAVAPGGDFSVLRTNSEDTL
FDSVEGNGTLIEESVKPRPQEEKPQACSEEVQRLEPTNEEESNLESAKDPETKYLSEDSR
DSDNSDVDLDSAVRQLQEFIPDIKERAATTIKRMYRDDLGRFKEFKAQGVAIKFGKFSVK
ENKQLEKNVQEFLSLTGIENADKLLYTDRYPEEKSLITDLKRKYSFRLHIGKGIARPWKL
VYYRAKKMFDVNNYKGRYSKGDTEKLKIYQSLHGNDWKKIGEMVSRSSLSVALKFSQISS
QRNHGAWSKTETQKLIKAVEEVILKKMSPQELNEMDSKLQENPEGRLSVVREKLYKGISW
VEVEAKVETRNWMQCKSKWTEILTKRMTNGRDVYRGVNALQAKINLIERLYEINVEDVNE
IDWEDLASAIGDVPPSYVQTKFYKLKATCVPFWQKKTFPEIIDYLYETSLPLLKEKLEKK
MEKKGTEIQTPATPKPVFLFRDIFYCDDDSEGEDGDEKC
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atggaaggcgaatcaagcagattggaaacccacactccagttttcgtcaagaaaaagact
aagcattctgtacataagaagagacatgggaggcatccccatgaaagtttcagaggctcc
tccctgtcaaatgaacaggctcacataactaagggtaaaaaaaagagaaaggatgcccag
catcttgtttcttctcctttgaaaaaatcagaaatttgcgatgagactgaaaaggccgct
tctatacccaaaaagagtaaaaagagaagaaaaggtgctttgggggtcgataaggaaaca
ggtgtcgcgtgcgtcctggtgaataaagaaaacattgagaacacaccaaagaattttaca
aagaatgtcgatgtcgtttacattgatgtaagcaaggagcgaaagtcaacaaaagggcct
gaagcagatgaaccgcatttagttactaagtcacatgaactgcatgataaagttcgggag
aaaaagcagagaaaacatcggaggaaagtttcatcctgtgatgctgtccaggaaagtctg
ggtgcaagcatcaccctgcccggatcagaatcccaagagcaggaaccccagcctcccatg
ggccaagaaggtgaaattgcacaactaccagtgtctgcagatcaaagcaagtctaagaaa
agaaagaggaagcgtccaagtgaccaggaattcgaggccttgcctgctcctgagagcgct
gagaacatatactcagagggatcgcaactgattggtgaggtcgggactgcagggggcaat
caggaatccagtggcctcaagaaaaagtctaagaaaaggaagagaagatcttctgttgat
actgccgtggcacctggtggtgatttttcagtcctcaggacgaactctgaggacacactc
tttgattcagtggaaggtaatggtaccttgattgaagaaagtgtgaaacccaggccacaa
gaggagaaaccccaggcctgttcggaagaggtgcagagattagaacctacaaatgaagaa
gaaagcaatttggagtcggctaaagatcctgaaaccaagtatttatctgaagattcgaga
gattcagataattcagacgtggatttggattctgctgtgaggcagctccaggagttcatc
cctgatatcaaggagagggctgccactacaattaagcgaatgtatcgggatgacttggga
cgctttaaagaatttaaagcccagggtgtcgctattaaatttggcaagttttccgtcaag
gaaaataagcagttagagaaaaacgtgcaagaatttctgtctctgacaggaatcgagaat
gcagacaagctgctgtacacagacagatacccagaggagaaatctctaatcaccgactta
aaaagaaaatactcgtttagattgcacattggtaagggcattgcccggccctggaaactc
gtatactaccgagcaaagaagatgtttgatgtcaacaattacaaaggcaggtatagcaaa
ggagataccgagaagctaaagatataccagtccctccatggaaacgactggaaaaagatt
ggcgagatggtgtctcgcagtagcctctctgtggccctgaagttctcccagatcagcagt
caaagaaatcatggtgcttggagcaagacggagacccagaaactaatcaaggctgttgaa
gaagtgattctaaagaaaatgtctccccaggagctaaacgagatggattctaaactccaa
gagaatcctgaaggccgcctgtcagttgttcgggaaaaactctacaaaggcatatcctgg
gtagaagtggaggctaaagtggaaaccaggaattggatgcagtgtaaaagtaagtggacg
gaaattctaaccaagaggatgacaaatggtcgggacgtgtaccggggagttaatgcccta
caggccaagatcaacctcattgaaaggttgtatgaaataaatgtggaagatgttaatgaa
atagactgggaagatcttgctagcgccataggggatgttcctccatcttatgtccaaact
aaattttataagctgaaagctacctgtgttcccttttggcagaagaagacttttccagag
attatagactacctttatgagactagtctaccgttgcttaaagaaaaattagagaagaag
atggagaaaaaagggactgagatccagaccccggcaacccccaagccagtcttcctgttt
cgagacatcttttattgtgacgatgacagtgagggagaagatggagatgaaaaatgttaa
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