Phocoena sinus (vaquita): 116755886
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Entry
116755886 CDS
T07759
Symbol
TUBB4B
Name
(RefSeq) LOW QUALITY PROTEIN: tubulin beta-4B chain
KO
K07375
tubulin beta
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04145
Phagosome
psiu04517
IgSF CAM signaling
psiu04540
Gap junction
psiu04814
Motor proteins
psiu05010
Alzheimer disease
psiu05012
Parkinson disease
psiu05014
Amyotrophic lateral sclerosis
psiu05016
Huntington disease
psiu05020
Prion disease
psiu05022
Pathways of neurodegeneration - multiple diseases
psiu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
116755886 (TUBB4B)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
116755886 (TUBB4B)
09144 Cellular community - eukaryotes
04540 Gap junction
116755886 (TUBB4B)
09142 Cell motility
04814 Motor proteins
116755886 (TUBB4B)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
116755886 (TUBB4B)
09164 Neurodegenerative disease
05010 Alzheimer disease
116755886 (TUBB4B)
05012 Parkinson disease
116755886 (TUBB4B)
05014 Amyotrophic lateral sclerosis
116755886 (TUBB4B)
05016 Huntington disease
116755886 (TUBB4B)
05020 Prion disease
116755886 (TUBB4B)
05022 Pathways of neurodegeneration - multiple diseases
116755886 (TUBB4B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psiu03036
]
116755886 (TUBB4B)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
psiu04812
]
116755886 (TUBB4B)
04147 Exosome [BR:
psiu04147
]
116755886 (TUBB4B)
Chromosome and associated proteins [BR:
psiu03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
116755886 (TUBB4B)
Cytoskeleton proteins [BR:
psiu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
116755886 (TUBB4B)
Exosome [BR:
psiu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
116755886 (TUBB4B)
Exosomal proteins of colorectal cancer cells
116755886 (TUBB4B)
Exosomal proteins of bladder cancer cells
116755886 (TUBB4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Misat_Tub_SegII
Tubulin_3
Tubulin_2
Motif
Other DBs
NCBI-GeneID:
116755886
NCBI-ProteinID:
XP_032491802
LinkDB
All DBs
Position
6:complement(636224..638710)
Genome browser
AA seq
445 aa
AA seq
DB search
MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV
PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV
EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
RFPGQLNADLRKLAVNMVPFPXLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM
AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATAEEEGEFEEEAEEEVA
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgagggagatagtgcacctgcaggccggccagtgcggcaaccaaatcggcgcaaagttt
tgggaggtgatcagcgatgagcatggcatcgatcctaccggcacctaccacggggacagc
gacctgcagctggagcggatcaacgtgtactacaacgaggccacgggtggcaagtacgtg
ccccgcgccgtgctcgtggatctggagccgggcaccatggactccgtgcgctcggggccc
ttcgggcagatattcaggccagacaacttcgtcttcggtcagagcggtgccgggaacaac
tgggccaaggggcactacacagaaggtgcggagctggtggactcggtgctggatgttgtg
aggaaggaagcggagagctgcgactgcctgcagggcttccagctgacccactcgctgggg
ggcggcaccgggtccgggatgggcacccttctcatcagcaagattcgcgaggagtaccca
gacagaatcatgaacactttcagcgtggtgccctcgcccaaggtatcggacaccgtggtg
gagccctacaacgccaccctctctgtccaccagctcgtagaaaacacagacgagacctac
tgcattgataacgaggctctctatgacatctgcttcagaaccctgaagttgaccacgccc
acctatggtgacctgaaccacctggtgtcggccaccatgagtggggtcaccacctgcctg
cgcttcccaggccagctcaatgctgacctgcgaaagctggctgtcaatatggtccccttc
cccngtctgcacttcttcatgcccggcttcgccccactgaccagccggggcagccagcag
taccgggcgctgacggtgcccgagctcacccagcagatgtttgatgccaagaacatgatg
gcggcctgtgacccccgccatggccgctacctgaccgtggccgccgtgttccggggccgc
atgtccatgaaggaggtggacgagcagatgctcaacgtgcagaacaagaacagcagctac
ttcgtcgagtggatccccaacaacgtgaagacggccgtgtgcgacatcccgccccgcggg
ctcaagatgtcggccaccttcatcggcaacagcacggccatccaggagctgttcaagcgc
atctcggagcagttcacggccatgttccgccgcaaggccttcctgcactggtacacgggc
gagggcatggacgagatggagttcaccgaggccgagagcaacatgaacgacctggtgtcc
gagtaccagcagtaccaggacgccacggccgaggaggagggggagtttgaggaggaggcc
gaggaggaggtggcctag
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