Phocoena sinus (vaquita): 116755948
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Entry
116755948 CDS
T07759
Symbol
TMOD1
Name
(RefSeq) tropomodulin-1 isoform X1
KO
K10370
tropomodulin
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
116755948 (TMOD1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
psiu04812
]
116755948 (TMOD1)
Cytoskeleton proteins [BR:
psiu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Capping proteins
116755948 (TMOD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomodulin
Motif
Other DBs
NCBI-GeneID:
116755948
NCBI-ProteinID:
XP_032491947
Ensembl:
ENSPSNG00000011410
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Position
6:complement(34396405..34476958)
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AA seq
367 aa
AA seq
DB search
MGTESSSTMSYRRELEKYRDLDEDEILGALTEEELRTLENELDELDPDNALLPAGLRQKD
QTTKAPTGPFKREELLDHLEKQAKEFKDREDLVPYTGEKRGKVWVPKQKPMDPVLESVTL
EPELEEALANASDAELCDIAAILGMHTLMSNQQYYQALGSSSIVNKEGLNSVIKPTQYKP
VPDEEPNATDLDETLERIKSNDPKLEEVNLNNIRNIPIPTLKAYAEALKENSYVKKFSIV
GTRSNDPVAFALAEMLKVNKVLKTLNVESNFISGAGILGLVEALPYNTSLVELKIDNQSQ
PLATRVEMEIVSMLEKNATLLKFGYHFTQQGPRLRASNAMMNNNDLVRKRRLADLTGPII
PKCRSGV
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgggaacagaaagttcttctacgatgtcgtacagacgagaactagagaaataccgtgac
ctggatgaagatgaaatccttggagcccttacagaagaagagctgaggaccctggaaaat
gagctggatgagctggaccctgataatgcactgctgcctgcgggcctgaggcagaaggat
cagaccaccaaggcgcccacgggcccctttaaaagggaggagctcttggatcacttggaa
aagcaagcaaaggagtttaaggaccgagaagatctggtcccctacacaggggagaagcga
ggaaaagtctgggtccccaagcagaagccgatggaccccgtgctggaaagtgtgacactg
gagccagagctggaggaggccctggcaaatgcctcggatgcggaactctgtgacatcgca
gctatcctgggcatgcacacgctcatgagcaaccagcagtactaccaggccttgggcagc
agctccatcgtgaacaaggagggactcaacagtgtgatcaaacctacacaatacaagcct
gtgcctgatgaagaaccaaatgcaacagacttggatgaaacgctggagcggataaagagc
aacgaccccaaacttgaagaggtcaacctcaacaacatccggaatatccccatacccact
ctcaaggcgtatgcagaagccctgaaagagaactcgtatgtgaagaagttcagcatcgtg
gggacacggagcaatgaccccgtggcatttgcccttgctgagatgctcaaggtgaacaag
gtgttgaagacactgaacgtggagtccaacttcatttccggagccgggatcctgggcctg
gtggaagctcttccatacaacacttctctggtggaactgaagatcgataaccagagccag
cccctggcaacaagggtggaaatggagatcgtgagcatgttggaaaaaaatgcaacactt
ctcaaattcggctaccacttcactcagcaggggccccggctgcgggcgtccaacgcgatg
atgaacaacaacgaccttgtgaggaagaggaggctggcagacttgaccgggcccatcatt
cccaagtgccggagtggcgtctag
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