KEGG   Phocoena sinus (vaquita): 116756045
Entry
116756045         CDS       T07759                                 
Symbol
RORB
Name
(RefSeq) nuclear receptor ROR-beta
  KO
K08533  RAR-related orphan receptor beta
Organism
psiu  Phocoena sinus (vaquita)
Pathway
psiu04710  Circadian rhythm
Brite
KEGG Orthology (KO) [BR:psiu00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04710 Circadian rhythm
    116756045 (RORB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:psiu03000]
    116756045 (RORB)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:psiu03310]
    116756045 (RORB)
Transcription factors [BR:psiu03000]
 Eukaryotic type
  Zinc finger
   Cys4 thyroid hormone receptor-like
    116756045 (RORB)
Nuclear receptors [BR:psiu03310]
 1. Thyroid hormone like
  1F. RAR-related orphan receptor
   116756045 (RORB)
SSDB
Motif
Pfam: zf-C4 Hormone_recep DUF7217
Other DBs
NCBI-GeneID: 116756045
NCBI-ProteinID: XP_032492135
Ensembl: ENSPSNG00000021397
UniProt: A0A8C9EBM4
LinkDB
Position
6:complement(45538641..45728202)
AA seq 459 aa
MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQRLQEQRQQQSGEAEALAR
VYSSSISNGLSNLSNEASGTYANGHVMDLPKSEGYYNVDSGQPSPDQSGLDVTGIKQIKQ
EPIYDLTSVPNLFTYSSFNNGQLAPGITMTEIDRIAQNIIKSHLETCQYTMEELHQLAWQ
IHTYEEIKAYQSKSREALWQQCAIQITHAIQYVVEFAKRITGFMELCQNDQILLLKSGCL
EVVLVRMCRAFNPLNNTVLFEGKYGGMQMFKALGSDDLVNEAFDFAKNLCSLQLTEEEIA
LFSSAVLISPDRAWLIEPRKVQKLQEKIYFALQHVIQKNHLDDETLAKLIAKIPTITAVC
NLHGEKLQVFKQSHPDIVNTLFPPLYKELFNPDCATVCK
NT seq 1380 nt   +upstreamnt  +downstreamnt
atgcgagcacaaattgaagtgataccatgcaaaatttgtggcgataaatcctctgggatc
cactacggagtcatcacgtgtgaaggctgcaagggattctttagaaggagccagcagaac
aatgcctcttactcctgcccgaggcagagaaactgtttaattgacagaaccaacagaaac
cgttgccaacactgccgactgcagaagtgtcttgccctaggaatgtcgagagatgcggtg
aagtttgggaggatgtccaagaagcagagggacagcctgtatgctgaggtgcagaagcac
cagcagcggctgcaggagcagcggcagcagcagagtggggaggcggaagccctcgccagg
gtgtacagcagcagcatcagcaatggcctcagcaacctgagcaacgaggccagtggcact
tacgccaacggacacgtcatggacctgcccaagtccgagggttattacaacgtggattcc
ggccagccgtcccctgatcagtcaggacttgacgtgactggaatcaaacagataaagcaa
gaacctatctatgacctcacatccgtacccaacttgtttacctatagttctttcaacaac
gggcagttagcaccagggataaccatgactgaaatcgatcgaattgcgcagaacatcatt
aagtcccatctggagacatgtcagtacaccatggaggagctacaccagctggcatggcag
atccacacatatgaagaaattaaagcgtatcaaagcaagtccagggaagcactgtggcag
caatgtgccatccagatcactcatgccatccaatatgtggtagagtttgcaaagcgaata
acaggcttcatggaactctgtcaaaatgatcaaatcctacttctgaagtcaggttgcttg
gaagtggttttagtgagaatgtgccgtgccttcaacccattaaacaacactgttctgttt
gaaggaaaatatggaggaatgcaaatgttcaaggccttaggttctgatgacctagtgaat
gaagcatttgactttgcaaagaatttgtgttccttgcagctgactgaagaagagattgct
ttgttctcatctgctgttctgatatctccagaccgagcctggctgatagaaccaaggaag
gtccagaagcttcaggaaaaaatttattttgcacttcaacatgtgattcagaagaatcac
ctggatgatgagaccttggcaaagttaatagccaagataccaaccatcacggcagtttgc
aacttgcacggggagaaactgcaggtatttaagcaatcgcatccagacatagtgaataca
ctctttcctccgttatacaaggagctctttaatcctgactgtgccaccgtctgcaagtga

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