Phocoena sinus (vaquita): 116756082
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Entry
116756082 CDS
T07759
Symbol
LAMC3
Name
(RefSeq) laminin subunit gamma-3
KO
K06247
laminin, gamma 3
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04151
PI3K-Akt signaling pathway
psiu04510
Focal adhesion
psiu04512
ECM-receptor interaction
psiu05145
Toxoplasmosis
psiu05146
Amoebiasis
psiu05165
Human papillomavirus infection
psiu05200
Pathways in cancer
psiu05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
116756082 (LAMC3)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116756082 (LAMC3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116756082 (LAMC3)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
116756082 (LAMC3)
09162 Cancer: specific types
05222 Small cell lung cancer
116756082 (LAMC3)
09172 Infectious disease: viral
05165 Human papillomavirus infection
116756082 (LAMC3)
09174 Infectious disease: parasitic
05146 Amoebiasis
116756082 (LAMC3)
05145 Toxoplasmosis
116756082 (LAMC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
Laminin_B
F5_F8_type_C
XhlA
MPS2
PqqD
Motif
Other DBs
NCBI-GeneID:
116756082
NCBI-ProteinID:
XP_032492208
Ensembl:
ENSPSNG00000011907
LinkDB
All DBs
Position
6:complement(5326798..5387250)
Genome browser
AA seq
1577 aa
AA seq
DB search
MAAVAALLLGLALLTPRAAGAGMGACYDDVGRPQRCLPVFENAAFGRLAEASHTCGRPPE
DFCPHVGAQGAGAQCQRCDAADPERHHNASYLTDFHSQDDSTWWQSPSMAFGVQYPTSVN
ITLNLGKAYEITYVRLKFHTSRPESFAIYKRTQAGGPWEPYQYYSASCQTTYGKPEGQYL
RPGEDERMAFCTSEFSDISPLSGGNVAFSTLEGRPSAYNFEESPVLQDWVTSTEFLISLD
RLNTFGDDIFKDPKVLQSYYYAVSDFSVGGRCKCNGHASECGPNEEGRLVCRCQHNTVGT
DCERCLPFFQDRPWARGTAEAASECLPCNCSGRSEECMFDRELFRSSGHGGRCLHCRDHT
AGPRCERCRENFYRWKPQMPCQPCDCHPAGSLHLQCNDSGTCTCKPTVTGWKCDRCLPGF
HSLSEGGCRPCTCNPAGSLGTCDPRSGRCPCKENVEGNLCDRCRPGTFSLQSHSPAGCSS
CFCYGHSRACAAAAHFREHHVLSDFRRGAEGWRTRSMGGPEHPAQWSPRGLLLDPEGKEE
LTAPEKFLGDQRFSYGQPLTLTFRGPPRASPIPVRLRLEGAGLTLTLRHSSSPSPLDARQ
PGEVQLKFLLQETSEDVDPPLPPFHVQRLLTNLTALRIQASGHSASPAGPVFLTEVRLTS
ARRGLSPPASWVETCSCPRGYTGQFCESCALGYKRETPLGGPYASCVPCTCNQHGTCDPN
TGICLCDHHTEGPSCERCLPGFYGNPFTGQADDCQPCPCPAQSACMTIPESREVVCTHCP
PGQRGWRCEICDDGFFGDPLGLSGAPQPCQLCQCSGNVDPNAVGNCDPLSGHCLRCLHNT
TGAHCESCEEGFYGSALSPRPADKCVSCSCDQAGSVGEQRPCDPVTGQCTCLPHVTGRDC
GHCSPGFYDLQPGGGCRSCKCHPLGSQENQCHPKTGQCPCRPGVEGQACDRCQLGFFGFS
IEGCRACRCSPLGAASAQCHENSTCVCRPGFVGYKCDLCQDNFFLTAGGTHCQECPSCYA
LVKKEAAKLKARLTLMEGWLQGSNCGRPWGPLDILQGEAPRGDVYQGHPLLQGAQEDFLE
QVTGLEGAVKAAQEQLQALSRKAHCAQARAEKTCIQLADLEAVLESSEEEILHAATILAS
LAMPQEGLGQPTNWSHLAIEARALARSHRDTTTRIEATARRALLTSNSSYALLWSLVEGR
TALEAQQELEDRYQEVHAAQRALGTAVAEVLPEAERVLAAVQQVGADAAQRLASPAAPAA
PPQKSQARTLGLKVQALEKTVTSRERVVTEAARALQATAQAVLHKTEPLTQLHREARAAL
TRASSSVRAAMVTVTGARTLLADLEGMKPRFPRPKDQAALRRQAAIVQDRLLAESKKKTR
QVERMLGNAASISSSAKKKGREAELLAKDSAKLAKALLREGKQERRRAGRLSSQTQSMLQ
QASQQVLASEARRQQLEAADQVGAGLSEMEKQIRESRTSLEKDIKALSELLARLGSLDTL
GAPARALNETQRALERLRLQLGPPGVLPGKLRLLEQESEQQQLQIQSFESNLAEIRADKQ
NLEAILHSLPESCASWQ
NT seq
4734 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtggctgcgctcctgctgggtctggcgctcctgacgccgcgggcggccggc
gcgggcatgggcgcgtgttacgacgacgtggggcgcccgcagcgctgcctgcccgtgttc
gagaacgcggcgttcggccggctagccgaggcctcccacacgtgcggccgcccgcccgag
gacttctgtccgcacgtgggcgctcagggagccggggcgcagtgccagcgctgcgacgcc
gccgaccccgagcgccaccacaacgcctcctacctcaccgacttccacagccaggacgac
agcacctggtggcagagcccgtccatggcctttggggtgcagtaccccacctcggtcaac
atcactctcaacctggggaaagcttacgagatcacctacgtgcggctgaagttccacacc
agccgccctgagagcttcgccatctacaagcgcacccaggccggcggtccctgggagccc
taccagtactacagcgcctcctgccagacgacctacggcaagcccgagggccagtacctg
cgccccggcgaggacgagcgcatggccttctgcacctccgagttcagcgacatctccccg
ttgagcggcggcaacgtggccttctccaccctggagggccggcccagtgcctacaacttt
gaggagagccccgtgttgcaggactgggtcaccagcaccgagttcctcatctccctagac
cggctcaacacgtttggggatgacatcttcaaggaccccaaggtgctgcagtcctactac
tacgctgtgtccgacttctctgtgggcggcaggtgcaagtgcaacgggcacgccagcgag
tgtggccccaacgaggagggccggctggtctgccgatgccagcacaacaccgtgggcacg
gactgcgagcgctgcctgcccttcttccaggaccgcccgtgggcccggggcacagccgag
gcggccagcgagtgtctgccttgcaactgcagcggccgctctgaggagtgcatgtttgac
cgggagctcttccgcagctcgggccatggtgggcgttgcctccactgccgtgaccacaca
gccgggccacgctgtgagcgctgccgggagaacttctatcgctggaagccacagatgcca
tgccagccctgtgactgccacccagcaggctctctgcacctccagtgcaatgactctggc
acctgcacgtgcaagcccacggtgacgggctggaagtgtgaccgctgcctgcccgggttc
cactcgctcagtgagggcggctgcagaccctgtacctgcaatcccgctggcagcctgggc
acctgtgatccccgcagtggccgctgtccctgcaaagagaatgtggaaggcaacctgtgt
gacagatgtcgcccgggcacatttagcctgcagtcccacagtccagccggctgcagcagc
tgcttctgctacggccactccagggcgtgtgcggccgctgcccacttccgggagcaccac
gtcctctccgacttccgccgaggagccgagggctggcggaccagaagcatggggggccca
gagcatcctgcacagtggagcccgagagggcttctcctggacccagagggcaaggaggag
ctcacagcaccagagaagttcctgggagaccagcggttcagctatgggcagcccctcaca
ctgacattccggggcccccccagggcctcccccatccctgtgaggctgaggctggaaggg
gcgggtctgaccttgactctgcggcattccagctcgcccagccccctggacgccaggcag
ccgggggaggtacagctcaagttcctgttgcaagagacctccgaggacgtggaccctccg
ttgccgcccttccacgtccagcggctgctcaccaatctgactgctctgcgcatccaggcc
agtggccacagtgccagccctgccggcccagtgttcctgactgaggtccggctcacgtcg
gcccggcggggactctccccgccagcctcctgggtggagacttgctcgtgtcccaggggc
tacacgggccagttctgtgagtcctgtgctctgggatacaagagggagacaccactgggg
ggtccctatgccagctgtgttccctgcacctgtaaccagcatggcacctgtgaccccaac
acagggatctgcctatgcgaccaccacaccgagggcccgtcctgtgagcgctgcttgcca
ggtttctatggcaaccccttcacaggccaagccgatgactgccagccctgtccgtgccct
gcacagtcggcctgcatgaccatcccagagagcagagaggtggtgtgtacccactgcccc
ccgggccagagagggtggcgctgtgagatctgtgatgatggcttttttggggacccgctg
gggctctctggggccccccagccttgccagctgtgtcagtgcagtgggaacgtggacccc
aacgcagtgggcaactgtgaccccctgtctggccactgcctgcgatgcctacacaacacg
acaggtgcccactgtgagagctgtgaggaaggcttctacgggagcgccctgtcccctcgg
cccgcagacaaatgcgtgtcctgcagctgcgaccaggcgggctcagtcggcgagcagaga
ccctgtgacccagtgaccggccagtgcacctgcctgcctcatgtgaccggacgggactgt
ggccactgcagccctggcttctacgacctccagcctggcgggggctgccggagctgcaag
tgccacccgctgggctcccaggagaaccagtgccaccccaagaccgggcagtgcccctgc
cgtccaggcgtcgagggccaggcctgcgacagatgccagctgggtttcttcggcttctcc
atcgagggctgccgggcctgcaggtgctccccgctgggcgccgcctcggcccagtgtcac
gagaacagcacgtgtgtgtgcaggcccggcttcgtgggctacaagtgtgacctctgccag
gacaacttcttcctcacggccggcggcacacactgccaggagtgcccgtcctgctacgcc
ctggtgaagaaggaggctgccaagctaaaggccagactgaccctgatggaagggtggctg
caggggtcaaactgtggcaggccctggggaccactggacattctacagggagaggcccca
cggggggacgtctaccagggccaccccctgctgcaaggggcccaggaagacttcctggag
caggtgacaggccttgagggtgctgtgaaggctgcccaggagcagctgcaggcactgagc
aggaaagcccactgtgcccaggccagagctgagaagacctgcatccagctggcagaccta
gaggcggtgctggagtcctcagaagaggagattctgcatgcagccaccatccttgcatct
ctggcgatgcctcaggaagggctcggccagcccaccaactggagccatctggccatagag
gcccgtgccctcgccaggagtcacagggacaccaccaccaggattgaggccactgctcgg
agggccctgctcacctccaacagcagttatgcgcttctctggagtctggtggaggggaga
acagccctggaggcccagcaggagctagaggacaggtaccaggaggtacacgcggcccag
agggcgctgggcacggctgtggcagaggtgctgcccgaagctgagagggtgctggccgcc
gtgcagcaagtcggcgcggatgcagcccagcgcctggcctcaccggctgcccctgcagca
ccgcctcagaagtcccaggccaggaccctgggcctgaaggtgcaggccctggagaagacg
gtcacatcgagagagcgcgtggtcaccgaggctgcccgggccctccaggccaccgcccag
gccgtgctgcacaagacagaaccccttacgcagctgcaccgggaagccagagctgctctg
acccgggcttcctcatctgtccgggctgccatggtgactgtcacaggagccaggactctg
ctggctgacctagaaggaatgaagccaaggtttcctcggcccaaggaccaggccgcactg
aggaggcaggcagccatcgtccaggacaggctccttgcagagtccaaaaagaagaccagg
caggtggagaggatgctgggaaatgcggcatctatctcctccagtgccaagaagaagggc
agggaagccgagctgttggccaaggacagtgccaagctcgccaaggccttgctgagggag
gggaagcaagagcgccgccgggctggccggctctctagccagacgcagtcgatgctccaa
caggcctcccagcaggtgctggcctcagaagcacgcagacagcagctagaagcagctgat
caggtgggtgccgggctgagcgagatggagaagcagatccgggaatcacgcacctctctg
gagaaggacatcaaagccttgtcggagctgcttgccaggctgggatcactggacaccctc
ggagcccccgcccgggccctgaatgagacccagcgggcgctggagcgcctgaggctgcaa
ctgggcccaccaggggtgctgccagggaaactgaggctcttggagcaggagtctgaacag
cagcagctgcagatccagagcttcgagagcaaccttgctgagatccgtgctgacaagcag
aatctggaggccattttgcatagcctgcccgagagctgtgccagctggcagtga
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