Phocoena sinus (vaquita): 116756100
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Entry
116756100 CDS
T07759
Symbol
DCAF10
Name
(RefSeq) DDB1- and CUL4-associated factor 10
KO
K11802
DDB1- and CUL4-associated factor 10
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psiu04121
]
116756100 (DCAF10)
Ubiquitin system [BR:
psiu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
116756100 (DCAF10)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WDR55
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_EML
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Beta-prop_VPS8
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
WD40_like
Beta-prop_DCAF4
Beta-prop_Vps41
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
116756100
NCBI-ProteinID:
XP_032492259
Ensembl:
ENSPSNG00000012332
UniProt:
A0A8C9C5Q6
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Position
6:complement(35200857..35256314)
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AA seq
564 aa
AA seq
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MFPFGPGSPGGDRAAGAGAEEPAPHARQAAAAGPLPSPPPSLQPGADAAPPPSPCGSPRH
PCAPSQPQTGRAGELRPPGALKSSAASAQGEQSPPSPPRRQPGPDCRAGSRGRHCLSARL
GGPGAQLFGWLRERSLGRGLFVDPARDNFRTMTNLYGSIHPADSVYLSTRTHGAVFNLEY
SPDGSVLTVACEQTEVLLFDPISSKHIKTLSEAHEDCVNNIRFLDNRLFATCSDDTTIAL
WDLRKLNSKVCTLHGHTSWVKNIEYDTNTRLLVTSGFDGNVIIWDTNRCTEDGCPHKKFF
HTRFLMRMRLTPDCSKMLISTSSGYLLILHDLDLTKSLEVGSYPILRARRTTSSSDLTTL
SSSSGPRVSGSPSHHSDSNSSSEKHMSRASQREGISPRNSLEVLTPEVPGERDRGNCITS
LQLHPKGWATLLRCSSNTDDQEWTCVYEFQEGAPVRPVSPRCSLRLTHYIEEANVGRGYI
KELCFSPDGRMISSPHGYGIRLLGFDKQCSELIDCLPKEASPLRVIRSLYSHNDVVLTTK
FSPTHCQIASGCLSGRVSLYQPKF
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgtttcccttcgggcccggtagccccggaggggacagggcggccggagccggggctgag
gagccggcaccccacgcgagacaggctgcagctgccgggccgctcccttctccgcccccg
tcgctacagccgggggctgacgcagcccctcctccgtcgccctgcgggagccctcgccac
ccctgcgccccttcgcagccccagactgggcgcgcgggggagctccggccgcccggagct
ctaaagtcctcagccgcttccgcccagggagagcagtcaccgccctccccgccgcgccgg
caacccgggcctgactgcagggccgggagccggggccggcactgcctcagcgcccgcctg
ggcggccctggcgctcagctgttcgggtggctgagagagcgcagcctgggccgcgggctg
ttcgtggatccggcacgagacaatttccgcaccatgactaacctctatggttccatccat
cccgcggactcggtgtacctcagcacccgcacccatggggccgtcttcaacctcgagtac
tcgcccgacgggtcagtgctgacagttgcttgtgaacagactgaagttctgctttttgat
cctatatcttcaaagcacataaaaacactttctgaagctcatgaagactgtgtaaataat
ataaggtttcttgataaccggctgtttgctacctgctctgatgacactacaatagcacta
tgggatctgagaaaactgaacagcaaagtatgcactttacatggtcacactagctgggtg
aagaacatcgaatatgatactaatacaagactcttagtaacgtcaggatttgatggaaat
gtcattatttgggacaccaacaggtgtacagaagatgggtgtccacataagaaattcttt
cacacacgttttctcatgcgaatgagattaacaccagattgttccaaaatgttgatctca
acgtcctctggatatctcttgattttgcatgatcttgacttaaccaagtctttagaagta
ggcagctatcccattctgagagcaagaagaacaacatcaagttcagatcttaccactttg
tcgagttcatccggtcctagagtttctggttcaccttctcatcatagtgattctaattca
tcttctgagaaacacatgtcacgagcctcgcaaagagaaggaatttcaccacgaaatagt
cttgaagtcttaacccctgaagttcctggtgagagagaccgtggaaattgcatcacatca
ttacagctgcacccaaaaggctgggccactcttcttcggtgctcaagcaacactgatgat
caggagtggacttgtgtctatgaattccaagaaggagctcccgtgcgaccagtctcacct
cgctgttctctacgactgactcattacattgaagaagccaacgtaggcaggggttatatc
aaagaactttgcttcagccctgatgggcgaatgatttcttccccacatggctacgggatt
cgcttgttgggatttgacaaacagtgcagtgaacttattgactgtttgcccaaagaagcc
agtcccctacgggtgatccgttctctgtactctcataatgatgtggtactgacgacaaag
ttctctccaacacattgtcagatcgcctccgggtgccttagtggacgggtttctttgtat
cagccaaagttttag
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