KEGG   Phocoena sinus (vaquita): 116756429
Entry
116756429         CDS       T07759                                 
Symbol
KDM4A
Name
(RefSeq) lysine-specific demethylase 4A
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
psiu  Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:psiu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:psiu03036]
    116756429 (KDM4A)
Enzymes [BR:psiu01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     116756429 (KDM4A)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     116756429 (KDM4A)
Chromosome and associated proteins [BR:psiu03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    116756429 (KDM4A)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 PHD_2 JmjN zf-HC5HC2H PHD DUF7141 Tudor_5 53-BP1_Tudor LBR_tudor Herpes_pp85 DUF4537
Other DBs
NCBI-GeneID: 116756429
NCBI-ProteinID: XP_032492681
Ensembl: ENSPSNG00000003123
LinkDB
Position
1:35963336..36005543
AA seq 1069 aa
MASESETLNPSARIMTFYPTMEEFRNFSRYIAYIESQGAHRAGLAKVVPPKEWKPRASYD
DIDDLVIPAPIQQLVTGQSGLFTQYNIQKKAMTVREFRKIANSDKYCTPRYSEFEELERK
YWKNLTFNPPIYGADVNGTLYEKHVDEWNIGRLKTILDLVEKESGITIEGVNTPYLYFGM
WKTSFAWHTEDMDLYSINYLHFGEPKSWYSVPPEHGKRLERLAKGFFPGSAQSCEAFLRH
KMTLISPLMLKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATRRWIEYG
KQAVLCSCRKDMVKISMDVFVRKFQPERYKLWKAGKDSTVIDHTLPTPEAAEFLKESELA
PRARKEEECPEEDDVEGVEDGEEGDLKKSLAKHRIGTKRHRVCLEIPQEVSQSELFPREE
LGSGQYDMAECQAALAPVRPTHSSVRQVEDGLTFPDYSDSTEVKFEELKNVKLEEEDEEE
EEDQEAAALDLSVNPVSFGGRLVFSGSKKKSSSSLGSGSSRDSISSDSETSEPLSCRAQG
QTGVLTVHSYTKGDDRVTAGESCTRKKGGATRSINERELAEVWVLASQPMVWRRVKKSIG
RRQPLSKLPRHHPLVLQDCVSDDDVSEQGTPEEEAEETEAWAKPLSQLWQNRPPNFEAEK
EFNEAMAQQAPHCAVCMIFQTYHQVEFGSLSQNCGSAPDLAPQKQRTKPLIPEMCFTSTG
CSTDINLSTPYLEEDGTSILVSCKKCSVRVHASCYGVPPAKASEDWMCSRCSANALEEDC
CLCSLRGGALQRANDDRWVHVSCAVAILEARFVNIAERSPVDVSKIPLPRFKLKCVFCKK
RRKRAAGCCVQCSHGRCPTAFHVSCAQAAGVMMQPDDWPFVVFITCFRHKIPNLERAKGA
LQSITAGQKVISKHKNGRFYQCEVVRLTTETFYEVNFDDGSFSDNLYPEDIVSQDCLQLG
PPAEGEVVQVRWTDGQVYGAKFVASHPIQMYQVEFEDGSQLVVKRDDVYTLDEELPKRVK
SRLSVASDMRFNEIFTEKEVKQEKKRQRVINSRYREDYIEPALYRAIME
NT seq 3210 nt   +upstreamnt  +downstreamnt
atggcttctgaatctgaaaccttgaatcccagtgctcggataatgaccttttacccgact
atggaggagttccggaacttcagtcgttatattgcctacattgaatcccaaggagctcat
cgggctgggctggctaaggttgttcctccaaaggagtggaagccacgagcgtcctatgat
gatattgatgacctggtcattcctgcccccatccagcagctagtgactgggcagtctggc
ctctttactcagtacaacatacagaagaaagccatgactgttcgagagttccgcaagatt
gccaatagcgataagtactgtaccccacgctatagtgaatttgaagagcttgaacggaaa
tactggaaaaatctcacattcaatcccccaatctatggtgcagatgtgaatggcactctc
tatgaaaagcatgttgatgagtggaatattggtcgcctgaaaacaatcctggacttggtg
gaaaaggagagcgggatcaccattgagggcgtgaacaccccatacctgtacttcggcatg
tggaagacatcctttgcctggcacactgaagacatggacctgtacagcatcaattacctg
cacttcggagaacccaaatcctggtactccgtcccgcctgagcacggaaagcggctggag
cgcctggccaaaggctttttcccgggcagtgctcagagctgtgaggcttttctccgccat
aagatgaccttgatttcgcctttaatgctgaagaaatacggaattccctttgacaaggtg
actcaggaagctggagaatttatgatcactttcccttacgggtaccatgccggctttaac
catggcttcaactgtgctgagtccactaattttgctacccggcggtggatcgagtatggc
aaacaagctgtgctgtgctcctgcagaaaggacatggtgaagatctccatggacgtgttt
gtgaggaagttccagccagaaaggtacaaactctggaaagctgggaaggacagcaccgtc
atcgaccacactctgcccacgccagaagcggccgagtttctcaaggagagtgaactggcc
ccgagagcccggaaggaggaggagtgcccggaggaggatgacgtggagggggtcgaggat
ggagaggagggtgacctgaagaagagcctggccaagcaccgtatcgggacaaagaggcac
cgagtttgtcttgaaatcccacaggaggtgagtcagagcgagctcttccccagggaggag
ctgggctctggacagtacgatatggcggagtgccaggctgcccttgctcctgtgaggccc
acccacagctccgtgcgccaagttgaggacggtctcaccttcccagattattccgactcc
actgaagtcaaatttgaagagcttaaaaatgtcaagctggaagaggaggatgaggaggag
gaggaggaccaggaagcggccgccttggacctttctgtgaatccggtttcttttgggggt
cgcctcgtcttctcaggctccaaaaagaagtcatcttccagcctgggctctggttcttca
cgggattctatttcttccgattcagaaaccagtgagcctctgtcctgccgagcccaaggg
caaacgggagtcctcactgtgcacagctacaccaagggggacgacagggtcaccgcagga
gagtcatgcacgaggaagaaagggggcgccaccaggagcatcaacgagcgggagctggct
gaggtgtgggtgctggcctcgcagcctatggtctggaggagagttaagaagtccataggc
cgtcgtcagcccttaagcaagctcccccgccaccacccgctcgtgttgcaggattgcgtc
agcgatgatgatgtatcagaacaggggacccccgaggaggaggctgaggagacggaggcc
tgggccaagcccctgagccaactgtggcagaaccgacctccaaactttgaggccgaaaag
gaattcaacgaggccatggcccagcaggcccctcattgcgccgtctgcatgatctttcag
acttaccatcaggtggagtttggaagccttagtcagaactgcggcagtgctccagattta
gcgccccagaagcagaggaccaagccactgattccagaaatgtgcttcacctcgactggg
tgtagcacggacatcaacctgtccaccccttacctagaggaggacggcaccagcatccta
gtgtcctgcaagaagtgcagcgtccgggtccatgccagttgctacggggtgccccctgca
aaggcttctgaagactggatgtgttctcggtgttcggccaatgccctggaagaggactgc
tgcttgtgctcattgcgaggaggagccctgcagagagccaatgacgacaggtgggtccat
gtctcgtgtgcggtggcgattctggaagcgagatttgtcaacattgcagaaagaagtcca
gtggatgtgagcaaaattcccctgccccgcttcaaactgaaatgtgtcttctgtaagaag
cggaggaaaagagctgctggctgctgtgtgcagtgttctcatggccgttgcccaactgcc
ttccacgtgagctgtgctcaggctgcaggagtgatgatgcagccagatgactggcctttt
gtcgtctttatcacctgctttcggcacaagatccctaatttggagcgtgccaagggggcc
ttgcagagcatcactgcgggccagaaggtcattagcaagcacaagaatgggcgcttctac
cagtgtgaggtggtaaggctcaccaccgagaccttctatgaagtcaactttgacgacggc
tccttcagcgacaatctctatcccgaggacatagtgagtcaggactgtctccagttgggt
cctcctgctgaaggggaagtagtccaagtgagatggacagacggccaagtctatggagcc
aagttcgtggcctctcaccccatccagatgtaccaggtggagtttgaggatggctcacag
cttgtggttaagagagatgacgtgtacacgctggatgaagagcttcccaagagagtcaag
tctagactgtcagtagcctcagacatgcgcttcaatgagattttcacggagaaagaggtt
aagcaggaaaagaaacggcaacgagttatcaactcaagataccgggaagattacattgag
cctgcactataccgggccatcatggagtag

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