KEGG   Phocoena sinus (vaquita): 116756499
Entry
116756499         CDS       T07759                                 
Symbol
CCNT2
Name
(RefSeq) cyclin-T2 isoform X1
  KO
K15188  cyclin T
Organism
psiu  Phocoena sinus (vaquita)
Pathway
psiu03250  Viral life cycle - HIV-1
psiu05202  Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:psiu00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    116756499 (CCNT2)
 09160 Human Diseases
  09161 Cancer: overview
   05202 Transcriptional misregulation in cancer
    116756499 (CCNT2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:psiu03021]
    116756499 (CCNT2)
Transcription machinery [BR:psiu03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     116756499 (CCNT2)
    Brd4/P-TEFb complex
     116756499 (CCNT2)
    7SK RNP complex
     116756499 (CCNT2)
SSDB
Motif
Pfam: CycT2-like_C Cyclin_N
Other DBs
NCBI-GeneID: 116756499
NCBI-ProteinID: XP_032492804
Ensembl: ENSPSNG00000017589
LinkDB
Position
7:complement(95615435..95663782)
AA seq 742 aa
MASGRGASSRWFFTREQLENTPSRRCGVEADKELSYRQQAANLIQDMGQRLNVSQLTINT
AIVYMHRFYMHHSFTKFNRNGEGGGLKLNIISPTALFLAAKVEEQARKLEHVIKVAHACL
HPLEPLLDTKCDAYLQQTQELVLLETIMLQTLGFEITIEHPHTDVVKCTQLVRASKDLAQ
TSYFMATNSLHLTTFCLQYKPTVIACVCIHLACKWSNWEIPVSTDGKHWWEYVDPTVTLE
LLDELTHEFLQILEKTPSRLKRIRNWRANQAAKKPKVDGQVSETPLLGSSLVQNSILVDS
VTGVPTNPSFQKPSTSTFPAPVPLNSGNISVQDSHASDNLSVLATGMPSTSYGLSSHQEW
PQHQESARTEQIYSQKQETSLSGSQYSINFQQAPSVSLHSGLHHRPDKISDHSSIKQDYT
HKAGSSKHHGPSSATPGVIPQKMSLDKYREKRKLETLDLDARDHYIAAQVEQQHKHVQSQ
AASSSSVTSPIKMKIPITNAEKPEKYMADKKEKSGSLKLRIPIPPTDKSVSKEELKMKIK
VSSSERHSSSDEGSGKSKHSSPHISRDHKEKHKEHPSNRHHPSSHKYTHSYSGSSSGGSK
HSADGIPPAVLRSPVGLSSDGISSSSSSSRKKLHINDASHNHHSKMSKSSKSSGSSSSSS
SSVKQYVSSHNSVFNHPLPPPPPVTYQVGYGHLSTLVKLDKKPVETNGPDVNHEYSTNSQ
HMDYKDTFDMLDSLLSAQGMNM
NT seq 2229 nt   +upstreamnt  +downstreamnt
atggcgtccggccgtggagcttcttctcgctggttctttactcgggaacagctggagaac
acgccgagccgccgctgcggagtggaggcggataaagagctctcgtaccgccagcaggcg
gccaacctcatccaggacatgggacagcgtctcaatgtctctcagcttacgataaacact
gcgattgtttatatgcacaggttttacatgcaccattctttcaccaaattcaatagaaat
ggtgaagggggtggtctcaaattgaatataatatcacctactgcattatttttggctgca
aaagtagaagaacaggctcgaaaacttgaacatgttatcaaagtagcacatgcttgtctt
catcccctagagccactgctggatactaaatgtgatgcttaccttcagcagactcaagaa
ctggttttacttgaaaccataatgctacaaaccctaggttttgagatcaccattgaacac
ccacacacagatgtggtgaaatgtacccagttagtaagagcaagcaaggatttggcacag
acatcctatttcatggctaccaacagtctgcatcttacaaccttctgtcttcagtataaa
ccaacagtgatagcatgtgtatgcattcatttggcttgcaaatggtccaattgggagatt
cccgtgtcaactgatggaaaacattggtgggaatatgtggatcctacagttactctggaa
ttactagatgagctaacacatgagtttctacaaatattggagaaaacgcctagtaggttg
aagaggattcgaaactggagggctaatcaggcggctaagaaaccaaaagtagatggacaa
gtatcagaaacaccacttcttggttcatctttggtccagaattccattttagtagatagt
gttactggtgtgcctaccaacccaagttttcagaaaccatctacatcaacattccctgca
ccagtacctctaaattcaggaaatatttctgttcaagacagccatgcatctgataatttg
tcagtgctagcaacaggaatgccaagtacctcatatggtttgtcatcacaccaagaatgg
cctcaacatcaagagtcggcaaggacagaacagatatattcacagaaacaggagacatct
ttgtctggtagccagtacagcatcaacttccagcaggcaccttctgtatcactgcattca
ggactacatcacagacctgacaaaatttctgaccattcttctattaagcaagattatact
cataaagcaggaagcagtaaacaccatgggccaagttctgctactcctggagtaattcct
cagaaaatgtctttagataaatacagagaaaaacgtaagctagaaacccttgatctggat
gcaagggatcattatatagctgcccaggtagaacagcaacacaaacatgtacagtcccag
gcagccagcagcagttctgtaacctctcccattaaaatgaaaattcccattacaaatgct
gaaaaacctgaaaaatatatggcagataagaaggaaaagagtggatcgctgaaattacgg
attccaataccacccactgataaaagtgtcagtaaagaagaactgaaaatgaagataaaa
gtttcttcctcagaaagacacagctcttctgatgaaggcagtgggaagagcaagcattcc
agcccgcatattagcagggaccataaggagaagcacaaggagcatccttccaaccgccac
caccccagcagtcacaagtatacccactcatacagtggcagcagcagtggtggcagcaag
cacagtgctgatgggataccacccgctgttctgaggagtcctgttggcctgagcagtgat
ggcatttcctctagttccagctcttcaaggaagaagctgcatatcaatgatgcatctcac
aaccatcactccaaaatgagcaaaagttccaaaagttcaggtagttcatctagttcttcc
tcctctgttaagcagtatgtatcctctcacaactctgtttttaaccatcccttaccccct
cctccccctgtcacataccaggtgggctacggacatctcagcaccctcgtgaaactggac
aagaagccagtggagaccaacggtcctgatgtcaatcacgagtacagtacaaacagccag
catatggactacaaagacacattcgacatgctggactcgctgttaagtgcccaaggaatg
aacatgtaa

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