Phocoena sinus (vaquita): 116756569
Help
Entry
116756569 CDS
T07759
Symbol
PSMD1
Name
(RefSeq) 26S proteasome non-ATPase regulatory subunit 1 isoform X1
KO
K03032
26S proteasome regulatory subunit N2
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu03050
Proteasome
psiu05010
Alzheimer disease
psiu05012
Parkinson disease
psiu05014
Amyotrophic lateral sclerosis
psiu05016
Huntington disease
psiu05017
Spinocerebellar ataxia
psiu05020
Prion disease
psiu05022
Pathways of neurodegeneration - multiple diseases
psiu05169
Epstein-Barr virus infection
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
116756569 (PSMD1)
09160 Human Diseases
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
116756569 (PSMD1)
09164 Neurodegenerative disease
05010 Alzheimer disease
116756569 (PSMD1)
05012 Parkinson disease
116756569 (PSMD1)
05014 Amyotrophic lateral sclerosis
116756569 (PSMD1)
05016 Huntington disease
116756569 (PSMD1)
05017 Spinocerebellar ataxia
116756569 (PSMD1)
05020 Prion disease
116756569 (PSMD1)
05022 Pathways of neurodegeneration - multiple diseases
116756569 (PSMD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
psiu03051
]
116756569 (PSMD1)
Proteasome [BR:
psiu03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
non-ATPase subunits
116756569 (PSMD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPN2_N
RPN2_C
PC_rep
HEAT_2
HEAT_EZ
HEAT
Tim54
Motif
Other DBs
NCBI-GeneID:
116756569
NCBI-ProteinID:
XP_032493083
Ensembl:
ENSPSNG00000007893
UniProt:
A0A8C9BS41
LinkDB
All DBs
Position
7:complement(8473389..8579458)
Genome browser
AA seq
954 aa
AA seq
DB search
MITSAAGIISLLDEEEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGFRSRQFA
ALVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAKCIDHYTKQCVENADLPE
GEKKPIDQRLEGIVNKMFQRCLDDHKYKQAIGIALETRRLDVFEKTILESNDVPGMLAYS
LKLCMSLMQNKQFRNKVLRVLVKIYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLVKED
NLLMAYQICFDLYESASQQFLSSVIQNLRTVGTPIASVPGSTNTGTVPGSEKDSDYSMET
EEKTSSVLVGKTPEVSPEPKDQTLKMIKILSGEMAIELHLQFLIRNNNTDLMILKNTKDA
VRNSVCHTATVIANSFMHCGTTSDQFLRDNLEWLARATNWAKFTATASLGVIHKGHEKEA
LQLMATYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLNQLKNASNDIVRHGGSL
GLGLAAMGTARQDVYDLLKTNLYQDDAVTGEAAGLALGLVMLGSKNAQAIEDMVGYAQET
QHEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPILRRSGMYTVAMAYCGSGNNKAI
RRLLHVAVSDVNDDVRRAAVESLGFILFRTPEQCPSVVSLLSESYNPHVRYGAAMALGIC
CAGTGNKEAINLLEPMTNDPVNYVRQGALIASALIMIQQTEITCPKVNQFRQLYSKVIND
KHDDVMAKFGAILAQGILDAGGHNVTISLQSRTGHTHMPSVVGVLVFTQFWFWFPLSHFL
SLAYTPTCVIGLNKDLKMPKVQYKSNCKPSTFAYPAPLEVPKEKEKEKVSTAVLSITAKA
KKKEKEKEKKEEEKMEVDEAEKKEEKEKKKEPEPNFQLLDNPARVMPAQLKVLSMPETCR
YQPFKPLSIGGIIILKDTSEDIEELVEPVAAHGPKIEEEEQEPEPPEPFEYIDD
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgatcacttcagccgctggaataatttctcttctggatgaagaagaaccacagcttaag
gaatttgcactacacaaattgaatgcagtggtcaatgacttctgggcagaaatttctgag
tctgtagacaaaatagaagttttgtatgaagatgaaggtttccggagtcggcagtttgca
gccttagtggcatctaaagtattttatcacctgggggcttttgaggagtctctgaattat
gcacttggagcaggtgacctcttcaatgtcaatgataactctgaatatgtggagactatt
atagcaaagtgcattgatcactacaccaaacagtgtgtggaaaatgcagatttgcctgaa
ggagaaaaaaaaccaattgaccagagattggaaggcattgtgaataaaatgtttcaacga
tgtctagatgatcacaagtataagcaagctatcggcattgctctggagacacgaagactg
gacgtctttgagaagactatacttgagtcgaatgatgtcccaggaatgctggcttatagc
ctcaagctctgcatgtctttaatgcagaataaacagtttcggaataaagtactgagagtt
ctagttaaaatctacatgaacttggagaaacctgatttcatcaatgtttgtcagtgctta
attttcttagatgatcctcaggctgtgagtgatatcttagaaaaactggtaaaggaagac
aacctcctgatggcttatcagatttgttttgatttgtatgaaagcgctagccagcagttt
ttgtcatctgtaatccagaatcttcgaactgttggcacccctattgcttctgtgcctgga
tccaccaatacgggtactgttccaggatcagagaaagacagtgactattcaatggaaaca
gaagaaaagacaagtagtgtacttgtaggaaagacaccagaagtgagtccagagcccaag
gatcagactttgaaaatgattaaaattctaagtggtgaaatggctattgagttacatctg
cagtttttaatacgaaacaataacacagatctcatgattctaaaaaacacaaaggatgcg
gtaaggaactctgtgtgtcacacagcaactgttatagcaaactcttttatgcactgtggg
actaccagtgaccagtttcttagagataacttggaatggttagccagagccactaactgg
gcaaaatttacagccacggccagtttgggtgtaattcataagggtcatgagaaggaggca
ttacagttaatggcaacatatcttcccaaggacacctctccaggatcagcctatcaggaa
ggtggaggtctctatgcactaggtctcattcatgccaatcatggtggtgatataattgac
tatctgcttaaccagcttaagaatgccagcaatgatattgttcgacatggtggcagtctg
ggccttggtttggctgccatggggactgcacgccaggatgtgtatgatttgctaaaaaca
aacctttatcaggatgatgctgtgacaggggaagcagctggcctggccctaggtttggtt
atgttgggctctaaaaatgcccaggctattgaggacatggttggctatgcacaggaaact
caacatgagaagattctacgtggtcttgcagttggcatagcattagtgatgtacgggagg
atggaagaggctgatgctctcattgaatctctctgccgtgataaggatccaattcttcga
cgatctggaatgtataccgtggccatggcttattgtggttcaggtaacaacaaagctatt
cgccgcctgctacacgttgctgtaagtgatgttaatgacgatgtcaggagggcagcagta
gaatcacttgggttcattctcttcaggacccctgaacagtgccccagtgtcgtttcattg
ttgtcagagagttacaatcctcatgtgcgttatggagctgcaatggccctgggcatctgc
tgtgctggtacaggaaacaaggaagcaattaatttgctagaaccaatgacaaatgaccct
gtgaactatgtgaggcaaggagctctcatagcttcggctctcatcatgatccagcagact
gaaatcacttgtcccaaggtgaatcagttcagacagctgtattcgaaagtcatcaatgat
aaacacgatgatgtcatggccaagtttggcgctattctggcccagggcatactggatgca
ggtggacataatgtcacaatctccttgcagtccagaactgggcatacccatatgccttct
gtggttggcgtccttgtctttacccagttctggttctggtttcctctttcacacttcctg
tcattggcttatacccctacctgtgtcattggccttaacaaggacttaaagatgccgaaa
gttcaatataaatcaaactgtaaaccatcaacatttgcatatcctgcccctctggaagta
ccaaaagaaaaagaaaaggaaaaggtttccactgctgtgttatctataactgccaaggct
aaaaagaaggaaaaagaaaaggaaaaaaaggaggaggagaaaatggaagtggatgaggca
gagaaaaaggaagaaaaagagaagaaaaaagaacctgagccaaacttccagttattggat
aacccagcccgagttatgcctgcccaacttaaggtcctaagcatgccagagacctgcaga
taccagcctttcaaaccactgtccattggaggcatcatcattctgaaggataccagtgaa
gacattgaagagctggtggaacctgtggcagcccatggcccaaaaattgaggaagaggag
caagagccagaacccccagaaccatttgagtatattgatgactaa
DBGET
integrated database retrieval system
