Phocoena sinus (vaquita): 116756571
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Entry
116756571 CDS
T07759
Symbol
FARSB
Name
(RefSeq) phenylalanine--tRNA ligase beta subunit isoform X1
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
116756571 (FARSB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
psiu01007
]
116756571 (FARSB)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psiu03016
]
116756571 (FARSB)
Enzymes [BR:
psiu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
116756571 (FARSB)
Amino acid related enzymes [BR:
psiu01007
]
Aminoacyl-tRNA synthetase
Class II (U)
116756571 (FARSB)
Transfer RNA biogenesis [BR:
psiu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
116756571 (FARSB)
Prokaryotic type
116756571 (FARSB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synthFbeta
PhetRS_B1
B5
B3_4
EAD7
Motif
Other DBs
NCBI-GeneID:
116756571
NCBI-ProteinID:
XP_032493086
Ensembl:
ENSPSNG00000014899
UniProt:
A0A8C9CDG3
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Position
7:15500767..15569310
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AA seq
589 aa
AA seq
DB search
MPTVSLKRDLLFRALGRTYTDEEFDELCFEFGLELDEITSEKEIISKEQGNEKAQGASDV
VLYKIDVPANRYDLLCLEGLVRGLRVFKERIKAPMYKRVIPNGEIQKLIITEETAKIRPY
AVVAVLRNIKFTKDRYESFIELQEKLHQNICRKRALVAIGTHDLDTLSGPFTYTAKKPSD
IKFKPLNKTKEYTACELMNIYKTDNHLKHYLHIIENKPLYPVIYDSNGVVLSMPPVINGH
HSKITVNTRNIFIECTGTDFTKAKIVLDIIVTTFSEYCENQFTVEAAEVVFPNGKLHTFP
ELAYRKEMVRADLINKKVGIRETPENLAKLLTRMCLKSEVIGDGNQIEIEIPPTRADIIH
ACDIIEDAAIAYGYNNIQMTLPKTYTIANQFPLNKLTELLRHDMAAAGFTEALTFALCSQ
EDIADKLGLDISATKAVLISNPKTAEFQVARTTLLPGLLKTIAANRKMPLPLKLFEISDI
VIKDSSRDVGARNYRHLCAVYYNKNPGFEIIHGLLDRIMQLLDVPPGEKKGGYVIRASEG
PAFFPGRCAEIFARGQSIGKLGVLHPDVITKFELTMPCSCVEINIEPFL
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgccgactgtcagcctgaagcgcgatttgctcttccgagctctgggccggacctacact
gatgaagaatttgatgaactatgttttgaatttggtctggaacttgatgaaattacatct
gagaaggaaattataagtaaggaacaaggtaatgaaaaggcacagggggcctctgatgtt
gttctctacaaaattgatgtccctgccaatagatatgatctcctgtgtctggaaggattg
gttcgaggacttcgggtcttcaaagaaaggataaaggccccaatgtataaacgggtaata
cctaatggagaaatccagaaattgatcatcacagaagagacagctaaaatacgcccgtat
gctgttgtagcagttctccgaaacataaagtttactaaagatcgatatgaaagcttcatt
gaacttcaggagaagttacatcagaacatttgcaggaaaagagccttggttgctattggt
acccatgacttggacactttgtcaggcccatttacttatactgcgaagaaaccttccgat
atcaaattcaagcctctaaataagaccaaggagtatacagcctgtgaactgatgaacata
tacaagactgacaaccaccttaaacattatttacatataattgaaaataaacctctgtat
ccggttatctatgatagcaatggtgtcgtcctttcaatgcctccagtcatcaatggacat
cattccaaaataacagtaaatactagaaatatatttattgaatgcacagggactgacttt
actaaggcaaaaatagttcttgatatcattgttaccacgttcagtgaatattgtgagaat
caatttacggttgaagcagctgaggtagtttttcctaatggaaaattacatacctttcca
gaactggcttatcgaaaggagatggtgagagctgatctaattaacaaaaaagttgggatc
agagaaactccagaaaatcttgccaagcttctgaccaggatgtgtttaaagtcagaagtc
ataggcgatgggaatcagattgaaattgaaatccctccaacgagagctgacattatccac
gcctgtgatatcatagaagatgcagctattgcttacggatataacaacattcagatgact
ctcccgaaaacatacaccatagctaatcaatttcccctaaataaactcacagaactcctg
agacatgacatggcagctgctggattcactgaggcacttacctttgctctgtgctcccaa
gaagatattgctgataaactgggtttggatatctctgcaacaaaggcagtcctcataagt
aatcctaaaacagctgaatttcaggtggcacgcactacccttcttcctggcctcctaaag
accatagctgcgaatcggaagatgccccttcctctgaaactgtttgaaatctctgacatt
gtaataaaagattctagcagagatgtaggtgcaagaaactacaggcatctctgtgctgtt
tactacaacaagaatcctgggtttgagataatccatgggcttctggacagaatcatgcag
ctacttgatgtgcctcctggcgaaaagaagggaggatatgtgatcagagcatcagaaggc
cctgcattcttccccgggcgatgtgctgagatctttgcccggggtcagagcatcgggaag
ctgggggtccttcatcctgatgttatcaccaaattcgagctgaccatgccctgctcctgc
gtggaaatcaacattgagccgtttttgtga
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