Phocoena sinus (vaquita): 116756594
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Entry
116756594 CDS
T07759
Symbol
TNFRSF1B
Name
(RefSeq) tumor necrosis factor receptor superfamily member 1B
KO
K05141
tumor necrosis factor receptor superfamily member 1B
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04060
Cytokine-cytokine receptor interaction
psiu04061
Viral protein interaction with cytokine and cytokine receptor
psiu04668
TNF signaling pathway
psiu04920
Adipocytokine signaling pathway
psiu05014
Amyotrophic lateral sclerosis
psiu05022
Pathways of neurodegeneration - multiple diseases
psiu05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04668 TNF signaling pathway
116756594 (TNFRSF1B)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
116756594 (TNFRSF1B)
04061 Viral protein interaction with cytokine and cytokine receptor
116756594 (TNFRSF1B)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
116756594 (TNFRSF1B)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
116756594 (TNFRSF1B)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
116756594 (TNFRSF1B)
05022 Pathways of neurodegeneration - multiple diseases
116756594 (TNFRSF1B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
psiu04050
]
116756594 (TNFRSF1B)
04090 CD molecules [BR:
psiu04090
]
116756594 (TNFRSF1B)
Cytokine receptors [BR:
psiu04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
116756594 (TNFRSF1B)
CD molecules [BR:
psiu04090
]
Proteins
116756594 (TNFRSF1B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNFR_c6
DUF4447
DUF6724
Motif
Other DBs
NCBI-GeneID:
116756594
NCBI-ProteinID:
XP_032493164
Ensembl:
ENSPSNG00000012455
UniProt:
A0A8C9E3K2
LinkDB
All DBs
Position
1:9522800..9557077
Genome browser
AA seq
454 aa
AA seq
DB search
MVPTAFWAALAVGLQLWAAGRAVPTQAVFIPYVPEPGSSCRLQEYYNTKVQMCCSKCPPG
YHVQSLCNQTSDTVCDSCESSTYTQLWNSVPACFSCNSHCSSDQLETQACTAKQNRICTC
KPGWYCTLGRQEGCRLCVPLRKCGPGFGVAKPGTATSNVACAPCAPGTFSDTTSSTDTCR
PHRICSSVAIRGTSEMDAVCTSVLPTLKVTPGPALTRSQHMEPTPRSSTAPSTSVRLPMA
PGPPSYPVEGRNTANMSLPIGLIVGVTALGLLIIVLVNCVIMTQKKKKPFCLHGDAKVPH
LPADKARSAPGPEQQRLLTTAPSSSSSSLESSASAADRRAPARPQLQAPGVGKAPASCGS
SAEASSGGHGTQVNVTCIVNVCSGSDHSSQCPSQASSTRDTDTSPSGSPKDEHVPFSKEE
CPFQSQPEAPETLLQSPEEKPLPLGVPDAGMKPS
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggtgcccaccgccttctgggccgcactggccgtcggactgcagctctgggccgcaggg
cgcgccgtgcccacccaggctgtgtttatcccctatgtcccagagcccgggagctcgtgc
cggctgcaagaatactacaacacaaaggtccagatgtgctgcagcaagtgtccaccaggc
taccacgtacaatccttatgcaaccagacctcagacaccgtgtgtgactcctgcgagagc
agcacatacacccagctctggaactcggtccctgcgtgctttagctgtaactcccactgc
agctctgaccagttggaaactcaagcctgcacagcaaaacagaaccgcatctgcacctgc
aagccgggctggtactgcaccctgggaaggcaggaggggtgccggctgtgcgtgccgctg
cgcaaatgtggccctggcttcggcgtggccaaaccgggaactgcaacatcaaatgtggca
tgcgctccctgtgccccagggacgttctccgacacaacgtcatccacggatacttgcagg
ccccaccggatctgtagctcggtggccatccgtggcacctcagagatggatgcagtctgc
acatctgtgctccccaccctgaaagtgaccccgggcccagccctcacaagatcccaacac
atggagccgactccacggtccagcacagctccaagcacctccgtccggctcccgatggcc
ccaggtcctccaagttacccagttgaagggcgcaacacagcaaacatgtctcttcccatc
ggactcattgtgggtgtgacagcattgggcctgctaataatagtcctggtgaactgtgtc
atcatgacccagaaaaaaaagaagcccttctgcctgcacggagacgccaaggtgccacat
ctgccagctgataaggcccgaagtgccccaggccccgagcagcagcgtctgctgaccacg
gcacccagctccagcagcagttccctggagagctcggccagcgccgcggacaggagggcg
cccgccaggccccagctgcaggcgccgggcgtggggaaggccccggccagctgtggcagc
tcagcagaggcatcgtctggtggccacgggacccaggtcaatgtcacctgcattgtcaac
gtttgcagcggctctgaccacagctctcaatgcccctcccaggccagctccacgagggac
acagacaccagcccctctggctccccgaaagatgagcacgtccccttctccaaggaggaa
tgccctttccagtcccagccagaggctccagagactctgctgcagagcccagaggagaag
cccctgcccctcggtgtacctgatgccgggatgaagcccagctaa
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