Phocoena sinus (vaquita): 116756610
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Entry
116756610 CDS
T07759
Name
(RefSeq) LOW QUALITY PROTEIN: heat shock cognate 71 kDa protein-like
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu03040
Spliceosome
psiu04010
MAPK signaling pathway
psiu04141
Protein processing in endoplasmic reticulum
psiu04144
Endocytosis
psiu04213
Longevity regulating pathway - multiple species
psiu04612
Antigen processing and presentation
psiu04915
Estrogen signaling pathway
psiu05020
Prion disease
psiu05134
Legionellosis
psiu05145
Toxoplasmosis
psiu05162
Measles
psiu05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116756610
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
116756610
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116756610
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116756610
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
116756610
09152 Endocrine system
04915 Estrogen signaling pathway
116756610
09149 Aging
04213 Longevity regulating pathway - multiple species
116756610
09160 Human Diseases
09172 Infectious disease: viral
05162 Measles
116756610
09171 Infectious disease: bacterial
05134 Legionellosis
116756610
09174 Infectious disease: parasitic
05145 Toxoplasmosis
116756610
09164 Neurodegenerative disease
05020 Prion disease
116756610
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
116756610
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
psiu01009
]
116756610
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psiu03041
]
116756610
03009 Ribosome biogenesis [BR:
psiu03009
]
116756610
03110 Chaperones and folding catalysts [BR:
psiu03110
]
116756610
04131 Membrane trafficking [BR:
psiu04131
]
116756610
03051 Proteasome [BR:
psiu03051
]
116756610
03029 Mitochondrial biogenesis [BR:
psiu03029
]
116756610
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psiu04147
]
116756610
Protein phosphatases and associated proteins [BR:
psiu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
116756610
Spliceosome [BR:
psiu03041
]
Complex B
Other components
Prp19 complex
116756610
Complex C
Prp19-CDC5 complex
116756610
Ribosome biogenesis [BR:
psiu03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
116756610
Chaperones and folding catalysts [BR:
psiu03110
]
Heat shock proteins
HSP70 / DNAK
116756610
Membrane trafficking [BR:
psiu04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
116756610
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
116756610
Proteasome [BR:
psiu03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
116756610
Mitochondrial biogenesis [BR:
psiu03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
116756610
Exosome [BR:
psiu04147
]
Exosomal proteins
Proteins found in most exosomes
116756610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
DMRL_synthase
Motif
Other DBs
NCBI-GeneID:
116756610
NCBI-ProteinID:
XP_032493219
LinkDB
All DBs
Position
7:53509470..53511359
Genome browser
AA seq
608 aa
AA seq
DB search
MPKGPAVGINLGTTYSCVGAFQHGKVEIIANDQGNQTTPSYVAFTDTERLIGDAAKNQVT
MNLTNTVFDVKRLTGRRFDDAVVQSDMKQWPFMVVNDASRPEVRVEYKGETKSFYPEEVS
SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATRGAGTIAGLNVLRIINKPTAAA
LAYGLDKKVGAEGNVLIFDLCGDTFDVSILTVEDGIFEIQSTDTHLGGEDFDNEMVNRFT
AEFKHKQDISENKRAFRRLHTACEHARCTLSSSTQASTEIDSLCEGVDFYTSITRARLEE
LNADLFRDTLDPVEKALQDAKLDKCHIHDIVLVGGSTHIPKILKLLQPSTDEAVAYGAVI
LSGDKYENVQDLLLLDVTPLSLGIETAGGVMTVLIKHNTTIPTKQTQMQTFTTYSDNQLS
VLIQIYEGERAMTKDNNLLCKFELTGVPPSPHGVPQIEVTFDNDANGILNVSAVGKSTGK
ENKITIINDKGHLSKEDIERMVQEAEKYKTEDEKQRGKVSSKNSLESYAFNVKATVEDEK
LQXDKNQTAEKEESEHQQKELEKVCNPIITKLYQSEGGMLGGMPGGFPGGGAPPSGGASS
GPTIEEVD
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgcctaagggacctgcagttggcattaatcttggcaccacctattcttgtgtgggtgcc
ttccagcatggaaaggtggaaataattgccaatgatcaggggaaccaaactaccccaagc
tatgtcgcctttactgataccgaacgattgatcggtgatgctgcaaagaaccaagtcaca
atgaatctcaccaacacggtttttgatgtcaaacgcctcactggacgaagatttgacgat
gctgttgtccagtctgatatgaagcagtggcccttcatggtggtgaatgatgcaagcagg
cctgaggttcgagtagaatacaagggagagacaaaaagtttctatccagaggaggtgtca
tccatggttttgaccaagatgaaggaaatagcagaagcctaccttgggaagactgttacc
aatgctgttgtcacagtacccgcttactttaatgattctcaacgtcaggctaccagaggt
gctggaactatcgctgggctcaatgtacttagaatcatcaataagccaactgctgctgct
cttgcctacggcttagacaaaaaggtcggagcagaaggaaatgtgctgatctttgattta
tgtggtgacacttttgatgtgtcaattctcactgttgaggatggaatctttgagatccaa
tctacagatacccacttaggtggggaagactttgacaacgaaatggtcaaccgtttcact
gcagagttcaagcacaagcaggacatcagtgagaacaagagggctttccgtcgccttcat
actgcttgtgagcatgctaggtgcactctctcttccagcacccaggccagtactgagatt
gattccctctgtgaaggagttgacttctatacctcaattacccgtgcccgacttgaagaa
ctgaatgctgacctgttccgtgacacactggaccctgtcgagaaagcccttcaggatgcc
aagctagacaagtgtcacatccatgatattgtactggtgggtggttcaacccacatcccc
aagattctgaaacttctacagccttctactgatgaggctgttgcttacggtgcagtcatt
ttatctggagacaaatatgaaaatgttcaagacttgctgctgttggatgtcactcctctt
tcccttggaattgaaactgcgggtggagtcatgactgtcctcatcaagcacaacaccacc
attcccaccaagcagacgcagatgcagaccttcacaacctactctgacaaccagctcagt
gtactcattcagatttatgaaggtgagcgtgccatgaccaaggataacaacttgctttgc
aagtttgaactcacaggcgtacctccttccccccatggtgttcctcagattgaagtcact
tttgataatgatgccaatggcatcctcaatgtctctgctgtgggtaagagcacaggaaaa
gagaacaagattaccatcattaatgacaagggccatttgagcaaggaagacattgaacgc
atggttcaggaagcagagaagtacaaaactgaagatgagaagcagcggggtaaggtgtct
tcgaagaattctcttgaatcctatgctttcaacgtgaaagctactgttgaggatgagaaa
cttcaannggataagaaccagactgcagagaaggaagaatctgaacatcagcagaaggag
ctggaaaaagtctgcaaccccatcattaccaagctgtaccagagtgaaggaggcatgcta
ggaggaatgcctgggggcttccctggtggtggagctcctccatctggtggcgcctcctct
gggcccaccattgaagaggttgattaa
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