Phocoena sinus (vaquita): 116756621
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Entry
116756621 CDS
T07759
Symbol
XRCC5
Name
(RefSeq) X-ray repair cross-complementing protein 5 isoform X1
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
116756621 (XRCC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psiu03400
]
116756621 (XRCC5)
DNA repair and recombination proteins [BR:
psiu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
116756621 (XRCC5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku_N
Ku
Ku_PK_bind
Ku_C
Motif
Other DBs
NCBI-GeneID:
116756621
NCBI-ProteinID:
XP_032493248
Ensembl:
ENSPSNG00000015841
UniProt:
A0A8C9E6N0
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Position
7:complement(21398825..21498286)
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AA seq
780 aa
AA seq
DB search
MARSGNKAAVVLCMDVRFAMSNSVPGEESPFELAKKVVTMFVQRQCAFAFFSRWIVSFQI
GPVINSAEVNWNFLVSCLFVYMCRNFSAVYIPVFAESKDEIALVLFGTDGTENALAGEGQ
YQNITVHRHLMLPDFDLLEDIESKIQPGSQQADFLDALIVCMDLIQQETVGKKFEKRHIE
VFTDLSSPFSRDQLGIIIHNLKKSGISLQFFLPFPVGKEDGTGDRGDGNLLSDHHGSSFP
PKGISEQQKEGIRMVKKVMMSLEGEDGLEEIYSFSESLRQLCVFKKIERRSMPWPCQLTI
GSNLSIKIVAYKSILQERVKKCWTVVDARTQKKEDIQKETVYCLNDDDETEVPREDTIQG
FRYGSDIIPFSKVDEEQMKYKSEGKCFSVLGFCTSSQVHMKYFMGNQVLKVFATKDDEAA
AVALSSLIHALDELDMVAIVRYAYDRRANPQVGVAFPYIRDTYECLVYVQLPFMEDLRQY
MFSSLKNNRKCTPTEAQLSAVDALIDSMSLVKKDEEEGTIEDLFPTSKIPNPQFQRLFQC
LLHRALHPQEPLPPIQQHILNMLDPPTEVTAKCQVPVSKIKTLFPLTEVLKKKDQVTAQD
IFPDNHEEGPISKKLKTEGDEAHFSISSLAEGSVTRVGSVNPAENFRVLVRQKKTSFEEA
SHQLINHIEQFLDTNETLYFMKSMDCIRVFREEAIQFSEEQHFNSFLKALREKVEVKQLN
HFWEIVIQDGITLITKDEASGSSVTAEEAKKFLAPKENPDEDTAAVCEEGGDVDDLLDLI
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggtcggggaataaggcagctgtggtgctgtgtatggatgtgcgttttgccatg
agtaactctgttcctggtgaagaatccccatttgaactagcaaagaaggtggtgaccatg
tttgtgcagcgacagtgtgcttttgcattcttcagtcgatggatagttagttttcagatt
ggccctgttataaacagtgctgaagtgaactggaactttcttgtctcttgcctctttgtg
tacatgtgcaggaacttctctgcagtatatatacctgtgtttgctgagagcaaggatgaa
attgcattagtcctttttggtacagatggcactgagaacgcccttgccggtgagggccag
tatcagaacatcacagtgcacagacacctgatgctaccggattttgacttgctggaggac
attgaaagcaaaatccaaccaggttctcaacaagctgactttctggatgccctcattgtg
tgcatggatttgattcaacaagaaactgtaggaaagaagtttgagaagaggcatattgaa
gtgttcactgacctcagcagcccattcagcagagatcagctgggtattataattcataac
ttgaagaaatctggcatctccctgcagttttttttgcctttcccagttggcaaggaagat
ggaactggggacagaggagatggcaacttgctctccgaccaccatgggtcctcctttcct
ccaaaaggaatcagtgagcagcaaaaagaaggtattcggatggtgaaaaaggtgatgatg
tctttagaaggtgaagatgggctggaggaaatttattccttcagtgagagtctgagacag
ctgtgtgtctttaagaaaattgagaggcgttccatgccctggccctgtcaactgaccatt
ggctccaatttgtctataaagattgtggcttataaatcgattctacaagagagagttaaa
aagtgttggacagttgtggatgcaagaactcaaaaaaaagaagatatacaaaaagaaaca
gtttattgcttgaatgacgatgatgaaactgaagttccaagagaggatactattcaaggg
ttccgctatgggagtgatatcattcctttctctaaagtggatgaggaacaaatgaaatat
aaatcggaggggaagtgcttctctgttttgggattttgtacatcttctcaggtccacatg
aaatattttatgggaaatcaagttctaaaggtctttgcaacaaaagatgatgaggcggca
gcagttgccctttcctccctgattcatgctttggatgaattggacatggtggccatagtt
cgatatgcttatgatagaagagctaatcctcaagttggcgtggcttttccttatatcagg
gacacctatgagtgtttagtgtacgtacagctgcctttcatggaagacttgcggcagtac
atgttttcatccttgaaaaataataggaaatgcactcccacagaggcgcagttgagtgct
gttgatgctttgattgactccatgagcttggtaaagaaagacgaagaggagggcaccatt
gaagacttatttccaaccagcaaaatcccaaatcctcaatttcagagattatttcagtgt
ctgctgcacagagctttacatccccaggagcctctgcccccaattcagcaacacattttg
aatatgctggatccccccactgaggtgacagctaaatgtcaggttcctgtctctaaaata
aagacccttttccctctgactgaagtcctcaagaaaaaggaccaagtgactgctcaggac
attttcccagataaccatgaagagggacccatctctaaaaaactgaagactgagggagat
gaagcccactttagtatttccagcctggctgaaggcagtgtcacccgtgttggaagtgtg
aatcctgctgaaaacttccgtgttctagtgaggcagaagaagaccagctttgaggaagca
agtcaccagttaataaatcacattgagcagtttttggatactaacgaaacactgtatttt
atgaagagcatggactgtatcagagtcttccgggaagaagccattcagttttcagaagag
cagcactttaacagtttcctgaaagcccttcgagagaaagtggaagttaaacaactaaat
catttctgggagattgtcatccaggatggaattactctgatcaccaaagatgaagcctct
ggaagctctgttactgctgaggaagccaaaaagtttctggcccccaaagaaaatccagat
gaagacacagcagctgtatgtgaggaaggtggtgacgtggatgatttgctggacttgata
tag
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