Phocoena sinus (vaquita): 116756644
Help
Entry
116756644 CDS
T07759
Symbol
PGAP1
Name
(RefSeq) GPI inositol-deacylase isoform X1
KO
K05294
GPI inositol-deacylase [EC:3.-.-.-]
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu00563
Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
psiu01100
Metabolic pathways
Module
psiu_M00983
GPI-anchor remodeling
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
116756644 (PGAP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psiu04131
]
116756644 (PGAP1)
Membrane trafficking [BR:
psiu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Post-GPI attachment to proteins factors (PGAP)
116756644 (PGAP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PGAP1
PGAP1_TMD
PGAP1_3rd
PGAP1_2nd
Palm_thioest
DUF676
Abhydrolase_1
Abhydrolase_6
Hydrolase_4
LIDHydrolase
Peptidase_S9
Lipase_3
DUF1749
DUF7379
DUF6341
Motif
Other DBs
NCBI-GeneID:
116756644
NCBI-ProteinID:
XP_032493311
Ensembl:
ENSPSNG00000020691
UniProt:
A0A8C9CY25
LinkDB
All DBs
Position
7:38653349..38745494
Genome browser
AA seq
943 aa
AA seq
DB search
MFLHSVNLWNLAFYALMVFMATLGLWDVFFGFEENKCSMSYMFEYPEYQKIELPKKLAKR
YPAYELYLYGEGSYAEEHKVLPLTGIPVLFLPGNAGSYKQVRSIGSIALRKAEDIDFKYH
FDFFSVNFNEELVALYGGSLQKQTKFVHECIKTILKLYKGQEFAPKSVAIIGHSMGGLVA
RALLTLKNFKQDLINLLITQATPHVAPVMPLDRFITDFYMTVNNYWILNARHINLTTLSV
AGGFRDYQVRSGLTFLPKLSHYTSALSVVSSAVPKTWVSTDHLSIVWCKQLQLTTIRAFF
DLIDADTKQITQNPKKKLSVLNHHFIRHPAKHFEENPSIVSDLTGTSMWVPVKVSKWTYV
AYNESDKIYFTFPLANHRKIYTHVYCQSTMLDTNSWIFGCINSTSMCRQGVDLSWKAELL
PTIKSLTLRLQDYPSLSHLVVYVPSIHGSKFVVDCEFFKKETRSIQLPVTHLFSFGLSSR
KVILNTSGLFYNIELLNFGQIYQAFKVNVVSKCSGVKEEITSIYKLHIPWSYEDSLTIAQ
VPSSTEISVKLHIAQPENDSHVALLKMYTSSDCQYEVTVKTSFSQILGQVVRFHGGALPA
YVISSILLAYGGQLYSLFSTGHCLEYAAMLDKEAKPYKVDPFVIMVKFLLGYKWFKEFWD
MLLLPELDAIVLTSQSMCFPLVSLILFLFGTCTAYWGGLLSSTSVRLLSSLWLTLKRPSE
LPKDMKIISPDLPILTVVLIIVSWATCGAFAILLTYLYYVFKIVHLQASLTTFKNSQTVN
PKHSRRSEKKSNHHKDSTVYQLRLSASDAEDSLRMHSTVINLLTWIVLLSMPSLIYWLKN
LRYYFKLNPDPCKPLAFILIPTMAVLGNTYTASIKSRYSILIFFFLTSVPGLYHTFMSET
CLSFLITWTVPEGKAIIVIMVYVQIQFIWKCIIFVSLIMHFIC
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgttcctccactccgtcaatctctggaacctggcgttttatgccctcatggtcttcatg
gcgaccctggggctgtgggacgtcttcttcggctttgaggaaaacaagtgtagtatgagc
tacatgtttgagtatccggagtatcagaaaatagaacttccaaagaaactggcaaaacgc
tatcctgcctatgaattatatctttatggagaaggatcctatgctgaagaacacaaggtt
ctccctttaacgggtattcctgttctctttcttcccggtaatgctggaagttataagcaa
gttcgttctatcggctctattgcacttagaaaagctgaagacattgacttcaagtaccac
tttgacttctttagtgtgaatttcaatgaagaactggtggcactatatggtggaagtctt
cagaagcagaccaagtttgtgcatgaatgcattaaaacaattctcaagctctataagggt
caagaatttgctccaaaaagtgtggcgataattggtcattctatgggtggccttgttgca
agagcattgcttacattgaaaaattttaagcaggatctgataaatcttcttattacacaa
gcaacacctcatgttgctcctgtgatgccattagatcgtttcattacagatttttatatg
actgtaaacaactattggattctgaatgctagacacataaatttaaccacactgtctgta
gctggaggattccgggattaccaagttcgttcaggactgacttttctaccaaaattaagc
cattataccagtgccttatctgttgtgagttcagcagtgcctaagacctgggtttcaaca
gaccacctctccattgtatggtgtaaacaattacaattgactacaattcgagcattcttt
gatcttattgatgctgatactaaacaaataactcaaaatcccaagaagaaattgtcagtt
ttgaatcaccacttcataagacacccagcaaaacactttgaggaaaatccatcaatagtt
tctgacttaacagggacatctatgtgggttccagtaaaagtgtccaaatggacctatgtg
gcttacaatgaatctgataagatatattttacatttccccttgcaaatcatagaaaaatc
tacactcatgtctattgtcagagcaccatgctggatacaaatagctggatttttggctgc
ataaacagcacttctatgtgccggcaaggggttgatttatcatggaaagctgaactgctg
ccaacaattaagtctctgacgttaagacttcaagactatccatctttgtctcatcttgtt
gtttatgtaccatctattcatggaagtaagtttgttgtagattgtgaattctttaaaaaa
gagacaagatccatacagcttcctgtaactcatcttttttcctttggattgtcttcaagg
aaagtgatattaaatacaagtggcctgttctataatatagagcttctgaactttgggcag
atataccaagcttttaaagtcaacgtggtaagcaagtgctcaggagtgaaagaagaaatt
actagtatctataaacttcatattccctggtcttatgaagattcactaaccattgcacag
gttccatcttccacagaaatttctgtgaaactccatattgctcaaccagaaaatgacagc
catgtagcattattaaaaatgtatacatcatcagactgtcaatatgaggtgacagttaag
acttccttttcacaaatacttggacaggtagttagatttcatggtggagctcttcctgcc
tatgttatatctagtatccttcttgcttatggaggacagttatactctcttttctcaaca
ggtcactgcttagaatatgctgctatgttggataaagaagccaaaccatacaaagttgat
ccttttgtaattatggttaagtttctgttgggatacaaatggtttaaagaattttgggat
atgttattgttaccagaattagatgccatcgttttaactagtcagagtatgtgtttcccc
cttgtatctttgattctttttctgtttggaacatgtactgcctactggggtggcctactc
tcttctacatctgtgagactcctttcttcattgtggctgactttgaaaaggccctctgaa
cttcctaaagatatgaagataatatcaccagacttgcccattttgacagttgttttgatc
atagttagttgggcaacttgtggagcatttgccatccttcttacttatctttactatgtg
tttaagattgttcatctgcaagccagcttaacaacttttaaaaatagccagactgtgaac
cccaaacactctagaagaagtgaaaagaaatccaatcaccataaagactctacagtatac
cagctccgtttatctgccagtgatgctgaagatagtcttcgcatgcacagtaccgtgatt
aacttattaacatggattgtattactcagcatgccatctttaatttattggctgaagaat
cttagatattactttaaacttaatcctgatccgtgtaaacctttggcatttatccttatt
ccaactatggcagttcttggaaatacttacactgcttcaataaaatcaaggtatagtatt
ttaatctttttttttctcacatctgttcctggtctttatcatactttcatgtctgaaaca
tgtctttcattcctaattacttggactgttcctgaaggtaaagctataatagtaattatg
gtttatgtgcaaatacagtttatatggaaatgtattatatttgtgtccttaattatgcat
tttatttgttag
DBGET
integrated database retrieval system
