Phocoena sinus (vaquita): 116756744
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Entry
116756744 CDS
T07759
Symbol
CARF
Name
(RefSeq) calcium-responsive transcription factor
KO
K21595
calcium-responsive transcription factor
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psiu03000
]
116756744 (CARF)
Transcription factors [BR:
psiu03000
]
Eukaryotic type
Other transcription factors
Others
116756744 (CARF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALS2CR8
Motif
Other DBs
NCBI-GeneID:
116756744
NCBI-ProteinID:
XP_032493552
Ensembl:
ENSPSNG00000011886
LinkDB
All DBs
Position
7:complement(33100876..33160536)
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AA seq
721 aa
AA seq
DB search
MEQSVDSLRVNHNDFEESKTNSQHLSCMDSSEPSFGQDGSPRVLPITTAVDNSLTSQNIP
GPLTQTQTLSAEQFHLVDQNGQPIQYELQSLGDSNEQMMIVASPSENGQVLRVIPSTQTG
TTQVIVPQGQLVDVNSPQDVSEEKPSDGNLPTVRVDSLADNNSSYILHPHASLTLPKKTV
TRILEEPFLAPLQPLSSNTPIWACRLRSCEKIGDSYRGYCVSETELESVLTFHKQQTQSV
WGTRQSPSPAKPATRLMWKSQYVPYDGIPFVNAGSRAVVMECQYGPRRKGFQLKKISEQE
SRSCQLYKATCPARIYIKKVQKFPEYRVPTDPKIDRKIIRMEQEKAFNMLKKNLVDAGGV
LRWYVQLPTQQAHQYHELETPCLPLSPSPFPMSSLEEEETAVRDENCTLPSRLHPQVAHK
IQELVSQGIQQVYAVRKQLRKFVERELFKPDEVPERHNLSFFPTVNDIKNHIHEVQKSLR
NGDNVYNSEIIPATLQWTTDSGNILRETVTVTLAEGNSQGEAISSKVETNQTRGSLSPEP
AHLLSSLSSFQPKIFTQLQGLQLQPRFTSSDGSPALISVNNHPSSSPSRLLDSVGSAVMN
NNSLLLGQTHCLQTDACLTQNNSISSTMGNLPGPDQNLVAVDQLVEVGDVEDTENLEGNV
HRILLGNVQTIPIQIIDSHPALIEESPEGTISVNQVKQEPKEPALSMEAKKKLDCKKLSA
T
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggaacagtctgttgattcattaagagtcaaccataatgatttcgaagagtcaaaaacc
aattctcagcatctaagctgtatggactccagtgagccttcttttggacaagatggttcc
cctagagttttacccattactactgcggtggataattcactcacatcacagaatatacca
gggcccctgactcagacacagactctttctgcagagcaattccacctagtggaccaaaat
gggcaacctattcaatatgagcttcagtcattgggggattctaatgagcaaatgatgatt
gttgccagcccatcagaaaacggacaggtgctgcgtgtaattccatctacccagacagga
acgacacaagtgattgtacctcaggggcagcttgtggatgtgaatagtcctcaggatgtc
tctgaagagaaacccagtgacggaaacttaccaactgtaagagtggattctctagcagac
aataacagtagttacattcttcatccacatgcatccctcacattgcccaaaaagacagtg
accagaatacttgaagaaccctttttggctccactccagccactttcttctaacacacct
atatgggcctgtcgtcttaggagctgtgagaaaattggagattcataccgtggctactgt
gtaagtgagactgaattagaaagtgtcctaacatttcacaagcagcaaacacagagtgtt
tgggggacccgccaatctccaagcccagccaagccagctacacgcttgatgtggaaatcc
cagtatgtcccatatgatggaatcccatttgtcaatgcagggagtagagctgtggtaatg
gagtgtcagtatgggccaagaagaaaaggtttccagttaaaaaaaatcagtgagcaggaa
agcaggtcttgtcagctctacaaagctacttgtccagcccggatttacattaaaaaggta
cagaaatttcctgaatatagagttcctacagaccccaaaattgacaggaaaataatccga
atggagcaggaaaaagcctttaacatgctaaagaagaacttggtagatgctggtggtgtt
cttaggtggtatgtacagttacctactcagcaagctcatcagtatcacgaattagagact
ccctgcctccctttatcaccttccccttttcctatgtcttctcttgaagaagaggaaact
gcagttagagatgagaactgtacattaccctcacgtctgcatcctcaagtagcacataaa
attcaagaactagtatcacagggaatacagcaagtgtatgcagtaaggaaacagctaaga
aaatttgtggaaagggaactgttcaaacctgatgaggtacctgaaagacataatttatcc
ttttttccaactgtaaatgatataaaaaatcacatccatgaggtacagaaatccttgaga
aatggagataatgtatataactcagagattattccagcaacgcttcagtggactacagat
agtgggaatattctcagagagactgtgacagttacacttgcagaaggaaattcacaagga
gaagcaatttccagcaaagtggaaacaaatcagacaaggggttctttgtctccagaacca
gcgcacttgctctcctcactttcttcatttcagccaaaaatattcacacaactacagggt
ttgcagttgcaaccaagattcacatcttctgatggatcaccagctctgatatcagtaaat
aatcacccctcctccagtccttcaagacttctggattcagtaggaagtgctgtaatgaat
aataattctctgctgcttggtcaaactcattgccttcaaacagatgcatgcctaacccaa
aacaatagtatttcctctaccatgggtaaccttccaggacccgatcaaaatctggttgca
gtggatcagctggtggaagttggagatgttgaggatacagagaatctggaaggaaatgtt
catcggattctgctgggaaatgttcagaccattccaatacagattatagacagccaccca
gctcttattgaagaaagtccagaaggtaccatttctgtgaaccaagttaagcaagaaccc
aaagaaccagcattatctatggaagcaaaaaaaaaattggactgtaagaaattgtctgct
acataa
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