Phocoena sinus (vaquita): 116756768
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Entry
116756768 CDS
T07759
Symbol
CSF1
Name
(RefSeq) macrophage colony-stimulating factor 1 isoform X1
KO
K05453
macrophage colony-stimulating factor 1
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04010
MAPK signaling pathway
psiu04014
Ras signaling pathway
psiu04015
Rap1 signaling pathway
psiu04060
Cytokine-cytokine receptor interaction
psiu04061
Viral protein interaction with cytokine and cytokine receptor
psiu04151
PI3K-Akt signaling pathway
psiu04380
Osteoclast differentiation
psiu04640
Hematopoietic cell lineage
psiu04668
TNF signaling pathway
psiu05010
Alzheimer disease
psiu05022
Pathways of neurodegeneration - multiple diseases
psiu05323
Rheumatoid arthritis
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116756768 (CSF1)
04014 Ras signaling pathway
116756768 (CSF1)
04015 Rap1 signaling pathway
116756768 (CSF1)
04668 TNF signaling pathway
116756768 (CSF1)
04151 PI3K-Akt signaling pathway
116756768 (CSF1)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
116756768 (CSF1)
04061 Viral protein interaction with cytokine and cytokine receptor
116756768 (CSF1)
09150 Organismal Systems
09151 Immune system
04640 Hematopoietic cell lineage
116756768 (CSF1)
09158 Development and regeneration
04380 Osteoclast differentiation
116756768 (CSF1)
09160 Human Diseases
09163 Immune disease
05323 Rheumatoid arthritis
116756768 (CSF1)
09164 Neurodegenerative disease
05010 Alzheimer disease
116756768 (CSF1)
05022 Pathways of neurodegeneration - multiple diseases
116756768 (CSF1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
psiu04052
]
116756768 (CSF1)
Cytokines and neuropeptides [BR:
psiu04052
]
Cytokines
CSF and other factors
116756768 (CSF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSF-1
Motif
Other DBs
NCBI-GeneID:
116756768
NCBI-ProteinID:
XP_032493576
Ensembl:
ENSPSNG00000013502
UniProt:
A0A8C9E551
LinkDB
All DBs
Position
1:97892022..97912309
Genome browser
AA seq
554 aa
AA seq
DB search
MTARGAAGRCPPTTWLGRLLLLACLLVNRSTTEEVSENCSHMIGNGHLQLLQRLIDSQME
TSCQIAFEFVDQEQLNDPVCYLKKAFLLVQDIMEDTMRFKDNTPNAIVIVNLQELSLRLR
SCFTRDYEGQDKACVRTFYETPLQLLEKIKNVFNETKNLLKKNWNIFSKNCNNSFAKCSS
QDVVTKPDCNCLYPKATPSSDPASVSPQQPLAPSMAPMAGLTWADSEGTEGSSLLPREQA
LRTVDPGSAKQRPPRSTCQSFESPETLGVEDHPTGGSPQPQPSVGAPVTGMEDILDSVLG
TNLDLEEASGEASEGLIPQGTELASRTLWRGSVQAETARTSRLLSAPSPLSGSGKDWQPA
DVTSTPLPTVGPVRATEAWSHTPENADHSSASPRGHQEPGSAGTPALRPHGLSSPSAPSS
QPRLPRSHSRGNVLPLGELEGKRSTRDRRSTAELEGGQASEGAAKPPARFNSVPLTDAGH
ERQHKEPSDPQLPGFVFRLLVPSIILVLLAVGGLLFYRRRRRSHREPQTVDSPVEQPEGS
PLTQDEDRQVELPV
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgcggggcgccgccgggcgctgccctcccacgacatggctgggccgcctgctg
ctgctggcctgtctcctcgtgaacaggagtactaccgaggaggtgtcggagaactgtagc
cacatgattgggaacggacacctgcagttactgcagcggctgattgacagtcagatggag
acctcgtgccaaattgccttcgagtttgtagaccaggagcagttgaacgaccccgtgtgc
taccttaagaaggcatttctcctggtgcaagacataatggaggacaccatgcgcttcaaa
gacaacacccccaatgccattgtcattgtcaatctccaggaactctctctgcggttgagg
agctgcttcaccagggactatgaagggcaggacaaggcctgtgtccgaactttctatgag
acgcctctccagttgctggagaagatcaagaatgtctttaatgaaacaaagaatctcctt
aaaaagaactggaacattttcagcaagaactgcaacaatagttttgctaaatgctccagc
caagatgtggtgaccaagcctgattgcaactgcctgtaccccaaagccacccctagcagt
gacccggcctctgtctcccctcagcagcccctcgccccctccatggcccctatggctggc
ttgacctgggctgactctgaggggacagagggcagctccctcttgcccagagagcaggcc
cttcgcacagtggacccgggcagtgccaaacagcgaccacccaggagcacctgccagagc
tttgagtcaccagagaccctgggcgtcgaggaccaccccactggaggttcacctcagccc
cagccctctgtcggagctcctgtcactgggatggaagacattcttgactctgtgctgggc
actaacttggacctggaagaggcctccggagaggctagcgagggtcttataccccaaggg
acagagcttgcctcccgcacgttgtggagaggcagcgtccaggcagagactgccaggacc
agccgtctcctctcagcaccttcaccactctctgggtcaggaaaggactggcagccagcg
gatgtaactagcacaccactgcccacggtgggccccgtgagagccactgaggcatggagt
cacacacctgagaatgcagaccattcatctgcctcgcccagaggccaccaggagccaggc
tctgccgggaccccagcactgcgcccgcacggcctcagcagtccctctgccccctcttct
cagccaaggcttcccagaagccattcccggggcaacgtgctgccccttggggagctggaa
ggcaagaggagcaccagggaccggaggagcaccgcagagctggaaggaggacaagcaagt
gagggggcggccaagcccccagcccgttttaactccgttcctttgactgacgcaggccat
gagaggcaacacaaggaaccctccgacccccagctccccggctttgtcttccgcctgctg
gtgcccagcatcatcctggtcctgctggctgtcggtggcctcctgttctacaggcggagg
cggcggagccatcgagagcctcagacagtagattctcccgtggaacaaccggagggcagc
cccctgacccaggatgaggacagacaggtggaactgccagtgtag
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