Phocoena sinus (vaquita): 116756804
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Entry
116756804 CDS
T07759
Symbol
OBSL1
Name
(RefSeq) obscurin-like protein 1 isoform X1
KO
K19574
obscurin-like protein 1
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psiu03036
]
116756804 (OBSL1)
Chromosome and associated proteins [BR:
psiu03036
]
Eukaryotic type
Centrosome formation proteins
3M complex
116756804 (OBSL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
V-set
C2-set_2
Izumo-Ig
Ig_4
BiPBP_C
Tissue_fac
FAM194
Motif
Other DBs
NCBI-GeneID:
116756804
NCBI-ProteinID:
XP_032493651
Ensembl:
ENSPSNG00000016426
UniProt:
A0A8C9CI23
LinkDB
All DBs
Position
7:18425167..18444579
Genome browser
AA seq
1025 aa
AA seq
DB search
MKAGSGDQGSPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPIVVWEKGGQQLAASERLSF
PADGAEHGLLLSGALPTDAGVYVCRARNAAGEAYAAAAVTVLEPPAPEREPQPAERPRPP
PGAGEGAPVFLTGPRSQWVLRGAEVVLECQVGGLPAPTLYWEKDGMALDEVWDSSHFSLE
PGHAEGRPGASLALRILAARLPDSGVYVCHARNAHGHARAGALLQVQQPPESPPEDPDEA
PNPVVEPLKCAPKTFWVNEGKHAKFRCYVMGKPEPEIEWHWEGHPLLPDRRRLMYRDRDG
GFVLKVLYCQAKDRGLYVCAARNSAGQTLSAVQLHVKEPRLRFTRPLQDVEGREHGIVVL
ECKVPNSRIPTAWFREDQRLLPCRKYEQIEEGTVRRLIIHRLKADDDGVYLCEMRGRVRT
VANVTVKGPILKRLPRKLDVFEGENAVLLVETCEAGVEGRWSRDGEDLPATCQSSSGHMH
ALVLPGVTREDAGEVTFSLGNSRTTTLLRVKCVKHNPPGPPVLAEMFKGHKNTVLLTWKP
PEPVPETPFIYRLERQEVGSEDWIQCFSIEKAGAVEVPGDCVPSEGDYRFRVCTVSEHGR
SSHVVFHGSAHLVPTARLVAGLDDVQVYDGEDAVFSLDLSTIIQGTWFLNGEELKSNEPE
GQVEPGALRYRMEQKGLQHRLILQAVRHQDSGALVGFSCPGVQDSAALTIQESPVHILSP
QDKVSLTFTTSERVVLTCELSRVDFPASWYKDGQKVEESESLVVKMDGRKHRLIMPEAQV
QDSGEFECRTEGVSAFFSISVQDPPVHILDPREHVFVHAITSECVMLTCEVDREDAPVHW
YKDGQEVEESDFVVLENEGPHHRLVLPAAQPPDGGEFQCVAGDERAYFTVTITDVSSWIV
YPSGKVYVAAVRLERVVLTCELCRPWAEVRWTKDGEEVVESPALLLQKEDAVRRLVLPAV
QLEDSGEYLCEIDDESASFTVTVTESYQSQDSSNNNPELCVLLKKPKTRRLWSRFPPWRR
TAGAE
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcgggctcgggggaccaggggagccccccgtgcttcctgcgcttcccgcggccc
gtgcgggtggtaagtggcgccgaggccgagctcaagtgcgtggtgcttggggagccgccg
cccattgtcgtgtgggagaagggcgggcagcagctggcggcctcggagcgcctgagcttc
ccggcggacggcgccgagcacggcctgctgctgagcggcgcgctgcccaccgacgcgggg
gtctacgtgtgccgcgcccgcaatgcggccggagaggcctacgcggcggccgccgtcacc
gtgctggagccgccggcccccgagcgcgagccccagcctgccgaacgcccgcggccgccg
cccggggccggggagggcgccccggtgttcctgacggggccccggtcccagtgggtgctg
cggggggcggaggtggtgctggagtgccaggtggggggcctccccgcgccaacgctgtac
tgggagaaggacgggatggcgctggacgaagtgtgggacagtagccacttctccctcgaa
cctggccacgccgagggccgcccgggcgcgagcctggcgctgcgcatcctggcggcgcgg
ctgcccgactccggcgtctacgtgtgccacgcccgcaacgcgcacggccacgcgcgggcc
ggcgcgctgctgcaagtgcagcagccccccgagagcccgcccgaggacccggacgaggcc
cccaaccccgtggtggagccgctcaagtgcgcgcccaagaccttctgggtgaacgagggc
aagcacgccaagttccgctgctacgtgatgggcaagcccgagcccgagatcgaatggcac
tgggagggccacccgctgctccctgaccgccgccgcctcatgtaccgcgaccgcgatggc
ggcttcgtgctcaaggtgctctactgccaggccaaggatcgcgggctctacgtgtgtgcc
gcgcgcaactcggcgggccagaccctcagtgccgtgcagctgcatgtcaaagagcctcgc
ctccgcttcacgaggcccctgcaggacgtggagggccgggagcatgggattgtggtgctg
gagtgtaaagtccccaactcccgcattcccacggcctggttccgcgaggaccagcggctg
ctgccctgccgcaagtacgagcagatcgaggagggcactgtccggcgcctcatcatccac
aggctgaaggcagatgacgacggagtttacctgtgcgagatgcgcggccgggtgcgcacc
gtggccaacgtgacagtcaaagggcccatcctgaagcggctgccccggaagctcgatgtt
tttgagggagagaacgcggtgctgctggtggagacctgcgaggctggggtggaagggcgc
tggagtcgagatggggaggacctgccggccacctgccagagcagctccggccacatgcat
gccctggtcctgccaggggtcacccgagaagatgctggcgaggtcaccttcagcctgggc
aattcccgtaccaccactctgctcagagttaaatgcgtcaagcacaatcccccgggaccc
ccagtgttggcagaaatgttcaagggccacaagaacacggtcctgctgacctggaagcct
cccgagccagttcccgagacccccttcatctaccggctggaacggcaggaggtgggctca
gaagactggatccagtgcttcagcattgagaaagctggggctgtggaggtgccgggagac
tgtgtgccctccgagggtgactaccgcttccgcgtctgcaccgtcagcgaacacggccgc
agttcccatgtcgtgttccatgggtctgctcatctcgtgcccacagctcgcctggtggcc
ggtctggacgacgtgcaggtatatgacggggaagatgccgtcttctccctcgatctctcc
accatcatccagggcacctggttccttaatggggaagagctcaagagtaatgagccagag
ggccaggtagagcctggggccctgcggtaccggatggagcagaagggcctgcagcacaga
ctcatcctgcaagctgtcaggcaccaggacagcggggccctggttggcttcagctgcccg
ggtgtgcaggactcggctgccctcaccatccaagagagcccggtgcacatcctgagcccc
caggacaaggtgtcgttgaccttcacaacctcggagcgggtggtactgacctgtgagctc
tcccgggtggacttcccagcgagctggtacaaggacgggcagaaggtggaggagagcgag
tcgctggtggtgaagatggatgggcgcaaacaccgcctgatcatgcctgaggcccaggtc
caggacagtggcgagtttgagtgcagaacggaaggggtctcagccttcttcagcatctcc
gtccaagacccccccgtgcacatcctggatccccgggagcacgtgtttgtgcacgccata
acctccgagtgcgtcatgctgacctgtgaggtggaccgggaggacgcccccgtgcactgg
tacaaggacgggcaggaggtagaagagagcgacttcgtggtgctggagaacgaggggccc
catcaccgcctggtgctgcccgccgcccagcctccagatgggggcgagttccagtgcgtc
gctggggacgagcgcgcctacttcaccgtgaccatcacagatgtctcctcgtggatcgtg
taccccagcggcaaggtgtatgtggcagccgtgcgcctggagcgtgtggtgctgacctgc
gagctctgccggccctgggccgaggtgcgctggaccaaggatggcgaagaggtagtggag
agtcccgcactgctcctgcagaaggaggacgccgtccgccgcctggtgctgcccgccgtc
cagctggaggactcgggcgagtacttgtgtgaaatcgatgacgagtctgcctctttcacc
gtcactgtcacagagtcttaccaaagtcaggacagttcaaataacaacccggagttatgc
gtcctcttgaaaaagccgaagacccggcgcctctggtcccgcttccccccttggcgacga
acagctggcgctgagtag
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