Phocoena sinus (vaquita): 116756859
Help
Entry
116756859 CDS
T07759
Symbol
SPOPL
Name
(RefSeq) speckle-type POZ protein-like isoform X1
KO
K10523
speckle-type POZ protein
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
116756859 (SPOPL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psiu04121
]
116756859 (SPOPL)
Ubiquitin system [BR:
psiu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
116756859 (SPOPL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MATH_2
BTB
BACK_BPM_SPOP
MATH
BTB_KLHL33
Motif
Other DBs
NCBI-GeneID:
116756859
NCBI-ProteinID:
XP_032493785
Ensembl:
ENSPSNG00000014332
LinkDB
All DBs
Position
7:complement(92140913..92203641)
Genome browser
AA seq
424 aa
AA seq
DB search
MSREPTPPLSGDMSTGPIAESWCYTQVKVVKFSYMWTINNFSFCREEMGEVLKSSTFSSS
PSDKMKWCLRVNPKGLDDESKDYLSLYLLLVSCPKSEVRAKFKFSLLNAKREETKAMESQ
RAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEHLQHCLQKRRKHCTGLPKEL
PPPLPCKWCCRQVSVVQDSVNISGHTNTNTLKVPECRLADDLGNLWENTRFTDCSFFVRG
QEFKAHKSVLAARSPVFNAMFEHEMEESKKNRVEINDVDPEVFKEMMRFIYTGKAPNLDK
MADNLLAAADKYALERLKVMCEEALCSNLSVENVADTLVLADLHSAEQLKAQAIDFINRC
SVLRQLGCKDGKNWNSNQATDIMETSGWKSMIQSHPHLVAEAFRALASAQCPQFGIPRKR
LKQS
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgggaacccaccccacctctctctggagatatgtctactggtcctatagcagaa
agctggtgttacacacaggttaaagttgtaaagttttcctacatgtggaccattaataac
ttcagtttttgtcgagaggaaatgggtgaagtgttaaaaagttcaacattctcatctagc
cccagtgacaaaatgaaatggtgcctgagggtaaatccaaagggattagatgatgaaagt
aaagactacttgtccttatatttgcttttagtcagctgtccaaaaagtgaagttcgagca
aaattcaaattttcccttctgaacgctaaaagggaagaaacaaaagcaatggaaagccaa
agagcatatcgatttgtacaagggaaagactggggttttaaaaaattcattcgaagggat
tttttgcttgatgaagctaatggtcttttaccagatgacaagcttacattattttgtgag
catctccagcactgcttgcagaagaggaggaagcattgcactggcctacctaaagaactg
cctcctcccctcccctgcaagtggtgctgtagacaggtgagtgtggtccaagattcagta
aatatatcaggacatactaatacaaatactttaaaggtgcctgaatgtcgactagcagat
gatttaggtaatctctgggaaaacacaagatttacagattgcagttttttcgtgagagga
caagaatttaaagctcataaatctgtacttgcagctcgatccccagtttttaatgcaatg
tttgaacatgaaatggaagaaagcaaaaagaatcgagtggaaataaatgatgtagaccct
gaggtttttaaagaaatgatgagattcatttacacagggaaagcgccaaatcttgacaaa
atggctgacaacttgttggcagctgcagacaaatatgcactggaacggctgaaggtcatg
tgtgaagaagctttgtgtagtaacctctcagtagaaaatgttgctgatacccttgtcctt
gcagatttgcacagtgcggaacagttgaaagcacaagccatagactttattaataggtgc
agtgtacttcgacagcttgggtgtaaagatgggaaaaactggaacagcaaccaagcaaca
gacataatggaaacatctgggtggaagtccatgattcagtctcacccacacttggtagca
gaagccttccgagcactagcatctgcacagtgtccgcagtttggtattccacgaaaacgg
ctgaaacagtcttga
DBGET
integrated database retrieval system
