Phocoena sinus (vaquita): 116756930
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Entry
116756930 CDS
T07759
Symbol
MYO1B
Name
(RefSeq) unconventional myosin-Ib isoform X1
KO
K10356
myosin I
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
116756930 (MYO1B)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
psiu01009
]
116756930 (MYO1B)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psiu04131
]
116756930 (MYO1B)
03036 Chromosome and associated proteins [BR:
psiu03036
]
116756930 (MYO1B)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
psiu04812
]
116756930 (MYO1B)
04147 Exosome [BR:
psiu04147
]
116756930 (MYO1B)
Protein phosphatases and associated proteins [BR:
psiu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
116756930 (MYO1B)
Membrane trafficking [BR:
psiu04131
]
Endocytosis
Phagocytosis
Others
116756930 (MYO1B)
Others
Actin-binding proteins
Myosins
116756930 (MYO1B)
Chromosome and associated proteins [BR:
psiu03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
116756930 (MYO1B)
Cytoskeleton proteins [BR:
psiu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
116756930 (MYO1B)
Exosome [BR:
psiu04147
]
Exosomal proteins
Proteins found in most exosomes
116756930 (MYO1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
Myosin_TH1
IQ
AAA_22
AAA_16
nSTAND3
RNA_pol
Zeta_toxin
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
116756930
NCBI-ProteinID:
XP_032493950
Ensembl:
ENSPSNG00000002795
UniProt:
A0A8C9B9U4
LinkDB
All DBs
Position
7:complement(43467904..43660431)
Genome browser
AA seq
1136 aa
AA seq
DB search
MAKMEVKTSLLDNMIGVGDMVLLEPLNEETVINNLKKRFDHNEIYTYIGSVVISVNPYRS
LPIYSPEKVEDYRNRNFYELSPHIFALSDEAYRSLRDQDKDQCILITGESGAGKTEASKL
VMSYVAAVCGKGAEVNQVKEQLLQSNPVLEAFGNAKTVRNDNSSRFGKYMDIEFDFKGDP
LGGVISNYLLEKSRVVKQPRGERNFHVFYQLLSGASEELLNKLKLERDFSRYNYLSLDSA
KVNGVDDAANFRTVRNAMQIVGFMDHEVESVLEVVAAVLKLGNIEFKPESRVNGLDESKI
KDKNELKEICELTGIDQSVLERAFSFRTVEAKQEKVSTTLNVAQAYYARDALAKNLYSRL
FSWLVNRINESIKAQTKVRKKVMGVLDIYGFEIFEDNSFEQFIINYCNEKLQQIFIELTL
KEEQEEYIREDIEWTHIEYFNNAIICDLIENNTNGILAMLDEECLRPGTVTDETFLEKLN
QVCATHQHFESRMSKCSRFLNDTSLPHSCFRIQHYAGKVLYQVEGFVDKNNDLLYRDLSQ
AMWKAGHALIKSLFPEGNPAKINLKRPPTAGSQFKASVATLMKNLQTKNPNYIRCIKPND
KKAAHIFNEGLVCHQVRYLGLLENVRVRRAGYAFRQAYEPCLERYKMLCKQTWPHWKGPA
RAGVEVLFNELEIPVEEYSFGRSKIFIRNPRTLFKLEDLRKQRLEDLATLIQKIYRGWKC
RTHFLLMRKSQIVMAAWYRRYAQQKRYQQIKSSTLVIQSYIRGWKARKILRELKHQKRCE
EAATTIAAYWHGTQARRELSRLKAEARNKHAIAVIWAYWLGSKARRELKRLKEEARRKHA
VAVIWAYWLGLKVRREYRKFFRANAGKKIYEFTLQRIVQKYFLEMKNKVPSLSPIDKNWP
SRPYLFLDSTHKELKRIFHLWRCKKYRDQFTDQQKLIYEEKLEASELFKDKKALYPSSVG
QPFQGPYLEINKNPKYKKLKDAIEEKIIIAEVVNKINRANGKSTSRIFLLTNNNLLLADQ
KSGQIKSEVPLVDVTKVSMSSQNDGFFAVHLKEGSEAASKGDFLFSSDHLIEMATKLYRT
TLSQTKQKLNIEISDEFLVQFRQDKVCVKFIQGNQKNGSVPTCKRKNNRLLEVAVP
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaatggaggtgaaaacgtcacttctggacaatatgattggagttggagatatg
gttcttttagaacctctcaatgaggagaccgtcatcaacaacctcaagaaacggtttgac
cacaatgagatatatacatacattggaagtgtggttatatctgttaacccataccggtca
ttgcccatttattcaccagagaaagtggaagattacaggaacagaaatttttatgaactg
agcccacacatctttgccctgtcagatgaagcatacagatccctaagagatcaagataaa
gaccaatgtattctgattactggggaaagcggagcaggaaaaacagaggccagcaagctt
gttatgtcctacgtagcagctgtttgtggaaaaggagcagaagttaatcaagtcaaagaa
cagcttttacagtccaacccagtcctggaagcatttggaaatgccaagactgtaaggaat
gacaactcctctagatttggcaaatacatggatattgaattcgattttaaaggcgatccc
ctgggaggagtgataagtaactatcttttagagaaatctcgtgttgttaagcagccaaga
ggtgaaagaaacttccacgtgttctatcagctgctttctggtgcctctgaagagctcctc
aataagcttaaacttgagcgggatttcagcagatacaattacctgagtctggactctgcc
aaagttaatggagtggacgacgcagcaaatttcagaaccgttaggaatgccatgcagatt
gtgggtttcatggaccacgaagttgagtccgtgttggaggtggtggccgcggtgttgaag
ctggggaacatcgagttcaagcccgaatcacgagtgaatggcttagatgaaagcaagatc
aaagataaaaatgagttaaaagaaatttgcgagctgaccggcattgaccagtcagtccta
gagcgagccttcagtttccgaacagttgaggccaagcaagagaaagtttcaactacactg
aacgtggctcaggcttattatgcccgtgatgctctggctaaaaacctctacagcaggttg
ttttcatggttggtaaatcgaatcaatgaaagcattaaggcgcaaacaaaagtgagaaag
aaggtcatgggtgttttggacatttatggcttcgaaatttttgaggacaacagctttgag
cagttcattattaattattgtaatgaaaagctgcaacaaatcttcattgagttgactctt
aaagaagagcaggaggaatatatacgggaggacatagaatggactcacattgagtacttc
aataatgctatcatttgtgacctaatagaaaataacacaaacggaatcctggccatgctg
gatgaggagtgcctgaggccaggcacggtcaccgacgagaccttcttggaaaagctgaac
caagtgtgcgccacccaccagcactttgagagcaggatgagcaagtgttcccggttcctc
aacgacacgtccctgcctcacagctgcttcaggatccagcattacgccggcaaggtgctg
taccaagtggaaggatttgtggataagaacaacgaccttctctatagagacctgtcccaa
gccatgtggaaggccggccatgccctcatcaagtctttgttccccgaagggaaccctgcc
aagatcaacctaaaaaggcctcctacagccggctcacagttcaaggcatcggtggccact
ctgatgaaaaacctacagaccaagaatccaaactacattaggtgtatcaaaccgaatgat
aaaaaggcagcacacatcttcaacgagggtctagtatgtcatcaggtcaggtatctgggt
cttttggagaatgtccgcgtgaggagagcaggctacgccttcaggcaggcctatgaacct
tgcttagaaagatacaaaatgctttgtaaacaaacatggcctcattggaaaggaccagca
agagctggcgtggaggttttgtttaatgaattggagattcctgtggaagagtactccttt
ggtagatcaaagatattcattcgaaacccaagaacattattcaaattagaagacctgagg
aagcagcgtcttgaggacctggccactctcattcagaagatttatcgggggtggaaatgt
cgcacacacttcctgctgatgagaaaaagccaaatcgtgatggctgcctggtacaggaga
tacgcgcaacaaaagaggtatcaacagataaagagctctaccttggtaattcagtcttat
atccggggttggaaggcccgaaaaatcctgagggaactgaagcatcagaagcgctgtgag
gaagcagccaccaccattgcagcgtattggcatggtacccaggcgcgaagggaactgagc
cggctgaaggcggaggctaggaataaacatgctattgcagttatttgggcttactggctt
ggatctaaggctcgaagggaattgaaacgcttgaaggaggaggctaggcgtaagcatgca
gttgctgtcatttgggcttactggcttggactgaaggtccgcagggagtacaggaaattc
ttcagagccaatgctggaaagaaaatttatgaatttacacttcagagaattgtgcaaaaa
tacttcttggaaatgaaaaataaggtgccttccttatctccgatagataagaattggcca
tcaagaccttacctattcttggattctactcacaaggagctgaaaaggattttccacttg
tggaggtgtaaaaaatacagggaccaattcacagaccaacagaaacttatttatgaagag
aaactagaagccagtgaactcttcaaagacaagaaggctttatacccatctagtgttggg
cagccattccaagggccttacctggaaatcaacaagaatcccaagtataagaaactcaaa
gatgccattgaagaaaagattatcattgctgaagtggtgaacaaaattaaccgtgctaat
gggaagagtacatcccggattttcctcttaacaaataataatctccttcttgctgatcaa
aagtctggacagatcaagtcagaggttcccctggtggatgtaaccaaagtatcgatgagc
tcacaaaatgatggcttctttgccgtccacctcaaagagggctcggaagcagctagtaaa
ggagactttctcttcagcagtgatcacctgattgaaatggccaccaagctctatcggacg
actctcagccaaaccaaacagaagctcaatattgaaatttctgatgagttcctggtgcag
ttcagacaagacaaagtatgtgtgaagtttattcagggcaaccagaaaaatgggagtgtc
ccaacatgcaagcgaaaaaacaaccgtcttcttgaagtcgctgtcccttaa
DBGET
integrated database retrieval system
